RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 RBM26Q5T8P6 1007 aaKnown RBP6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 VPS53Q5VIR6 699 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 CNBD1Q8NA66 436 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 INTS4Q96HW7 963 aaKnown RBP6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 JAKMIP1Q96N16 626 aaKnown RBP6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 TSR3Q9UJK0 312 aaKnown RBP6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 MYH13Q9UKX3 1938 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 ZMYM6O95789 1325 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 PDS5AQ29RF7 1337 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 TIAM2Q8IVF5 1701 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 KIAA1551Q9HCM1 1747 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 NPHP1O15259 732 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 OATP04181 439 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 GYS1P13807 737 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 PTMSP20962 102 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 ADD2P35612 726 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 NUCB2P80303 420 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 RASGRF1Q13972 1273 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 ANKRD1Q15327 319 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 UBE3CQ15386 1083 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 CCDC129Q6ZRS4 1044 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 RUFY3Q7L099 469 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 GPIHBP1Q8IV16 184 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 FLAD1Q8NFF5 587 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 TMX3Q96JJ7 454 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 UPF3BQ9BZI7 483 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 ANKRD2Q9GZV1 360 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 ALDH8A1Q9H2A2 487 aaPredicted RBP6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 SH2B1Q9NRF2 756 aaPredicted RBP6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 GNL3LQ9NVN8 582 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 CYP46A1Q9Y6A2 500 aa6.51□□□□□ -1.37
NPIPB3-214ENST00000545358 TAF1P21675 1872 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 COL1A1P02452 1464 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 DDX11L8A8MPP1 907 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 M0R2C6 588 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 IGSF3O75054 1194 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 CYP2E1P05181 493 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 HMGB1P09429 215 aaKnown RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 HSPD1P10809 573 aaKnown RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 RPS6KB1P23443 525 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 BCAMP50895 628 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 AK2P54819 239 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 RPS8P62241 208 aaKnown RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 MAP3K12Q12852 859 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 GRAPQ13588 217 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 ADCK5Q3MIX3 580 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 CRY2Q49AN0 593 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 PRR5LQ6MZQ0 368 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 TMED8Q6PL24 325 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 BLOC1S2Q6QNY1 142 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 PI16Q6UXB8 463 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 SMIM5Q71RC9 77 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 HELBQ8NG08 1087 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 GRAPLQ8TC17 118 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 CELF1Q92879 486 aaKnown RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 OSBP2Q969R2 916 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 ZSCAN31Q96LW9 406 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 GBP4Q96PP9 640 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 SEC62Q99442 399 aaKnown RBP6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 PDRG1Q9NUG6 133 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 PLA2G2EQ9NZK7 142 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 CTNNA3Q9UI47 895 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 MINPP1Q9UNW1 487 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 LIMCH1Q9UPQ0 1083 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 ADGRG1Q9Y653 693 aa6.5□□□□□ -1.37
NPIPB3-214ENST00000545358 ANKRD31Q8N7Z5 1873 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 MYO5AQ9Y4I1 1855 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 TCRBV5S4A2TA0A5A2 114 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 SMAPO00193 183 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 POLRMTO00411 1230 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 GPAA1O43292 621 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 IDH1O75874 414 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 APBA3O96018 575 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 PDE6AP16499 860 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 DNAJB2P25686 324 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 TM4SF1P30408 202 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 PPP4CP60510 307 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 ZNF827Q17R98 1081 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 WASHC4Q2M389 1173 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 CAVIN4Q5BKX8 364 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 IFFO2Q5TF58 517 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 CLEC17AQ6ZS10 378 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 SAMD7Q7Z3H4 446 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 TMC4Q7Z404 712 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 SLF2Q8IX21 1173 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 PIH1D3Q9NQM4 214 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 DENND2AQ9ULE3 1009 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 HPS5Q9UPZ3 1129 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 LTBP1Q14766 1721 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 CACNA1SQ13698 1873 aa6.49□□□□□ -1.37
NPIPB3-214ENST00000545358 COL11A2P13942 1736 aaPredicted RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 KLRG2A4D1S0 409 aaPredicted RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 FRAT2O75474 233 aaPredicted RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 CHGBP05060 677 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 SERPINB2P05120 415 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 CYP21A2P08686 494 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 PDIA4P13667 645 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 MCM4P33991 863 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms