RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 SYKP43405 635 aa15.08■□□□□ 0
CPSF7-223ENST00000544669 SPATA5Q8NB90 893 aa15.08■□□□□ 0
CPSF7-223ENST00000544669 CACTINQ8WUQ7 758 aaKnown RBP15.08■□□□□ 0
CPSF7-223ENST00000544669 MPHOSPH8Q99549 860 aa15.08■□□□□ 0
CPSF7-223ENST00000544669 CEP131Q9UPN4 1083 aa15.08■□□□□ 0
CPSF7-223ENST00000544669 CLIC4Q9Y696 253 aa15.08■□□□□ 0
CPSF7-223ENST00000544669 RTL9Q8NET4 1388 aa15.07■□□□□ 0
CPSF7-223ENST00000544669 SHANK3Q9BYB0 1731 aa15.07■□□□□ 0
CPSF7-223ENST00000544669 PNPLA7Q6ZV29 1317 aa15.07■□□□□ 0
CPSF7-223ENST00000544669 A0A1B0GVL5 298 aa15.07■□□□□ 0
CPSF7-223ENST00000544669 RIOK3O14730 519 aaKnown RBP15.07■□□□□ 0
CPSF7-223ENST00000544669 FOSBP53539 338 aa15.07■□□□□ 0
CPSF7-223ENST00000544669 PTPN14Q15678 1187 aa15.07■□□□□ 0
CPSF7-223ENST00000544669 TMEM67Q5HYA8 995 aa15.07■□□□□ 0
CPSF7-223ENST00000544669 KANK3Q6NY19 840 aa15.07■□□□□ 0
CPSF7-223ENST00000544669 AOPEPQ8N6M6 819 aa15.07■□□□□ 0
CPSF7-223ENST00000544669 DACH1Q9UI36 760 aa15.07■□□□□ 0
CPSF7-223ENST00000544669 GOLGA8AA7E2F4 631 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 PCP11498 1178 aaKnown RBP15.06■□□□□ 0
CPSF7-223ENST00000544669 GPTP24298 496 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 HLFQ16534 295 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 CCDC152Q4G0S7 254 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 KRT40Q6A162 431 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 OLFM4Q6UX06 510 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 MFSD6Q6ZSS7 791 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 C17orf53Q8N3J3 647 aaPredicted RBP15.06■□□□□ 0
CPSF7-223ENST00000544669 IGDCC4Q8TDY8 1250 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 CDC5LQ99459 802 aaKnown RBP15.06■□□□□ 0
CPSF7-223ENST00000544669 FEZ1Q99689 392 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 MORC2Q9Y6X9 1032 aaPredicted RBP15.06■□□□□ 0
CPSF7-223ENST00000544669 TCRBV5S4A2TA0A5A2 114 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 IFNAR1P17181 557 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 XBP1P17861 261 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 IGHMBP2P38935 993 aaKnown RBP15.06■□□□□ 0
CPSF7-223ENST00000544669 NT5C2P49902 561 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 RILPL1Q5EBL4 403 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 CT47A1Q5JQC4 288 aaPredicted RBP15.06■□□□□ 0
CPSF7-223ENST00000544669 AXDND1Q5T1B0 1012 aaPredicted RBP15.06■□□□□ 0
CPSF7-223ENST00000544669 AKNAD1Q5T1N1 836 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 CEP135Q66GS9 1140 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 VPS37DQ86XT2 251 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 IFNL3Q8IZI9 196 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 UTP14AQ9BVJ6 771 aaKnown RBP15.06■□□□□ 0
CPSF7-223ENST00000544669 FTOQ9C0B1 505 aaKnown RBP eCLIP15.06■□□□□ 0
CPSF7-223ENST00000544669 NRBP1Q9UHY1 535 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 TUBE1Q9UJT0 475 aa15.06■□□□□ 0
CPSF7-223ENST00000544669 ABCA3Q99758 1704 aa15.05■□□□□ 0
CPSF7-223ENST00000544669 DISP2A7MBM2 1401 aa15.05■□□□□ 0
CPSF7-223ENST00000544669 A0A0G2JLW4 131 aa15.05■□□□□ -0
CPSF7-223ENST00000544669 PSDA5PKW4 1024 aaPredicted RBP15.05■□□□□ -0
CPSF7-223ENST00000544669 IFIT3O14879 490 aaKnown RBP15.05■□□□□ -0
CPSF7-223ENST00000544669 RGL2O15211 777 aa15.05■□□□□ -0
CPSF7-223ENST00000544669 FMNL1O95466 1100 aaPredicted RBP15.05■□□□□ -0
CPSF7-223ENST00000544669 PFKFB1P16118 471 aa15.05■□□□□ -0
CPSF7-223ENST00000544669 CCDC85AQ96PX6 553 aaPredicted RBP15.05■□□□□ -0
CPSF7-223ENST00000544669 PIH1D3Q9NQM4 214 aaKnown RBP15.05■□□□□ -0
CPSF7-223ENST00000544669 GNL3LQ9NVN8 582 aaKnown RBP15.05■□□□□ -0
CPSF7-223ENST00000544669 BTG4Q9NY30 223 aa15.05■□□□□ -0
CPSF7-223ENST00000544669 HPSEQ9Y251 543 aa15.05■□□□□ -0
CPSF7-223ENST00000544669 IGSF3O75054 1194 aa15.04■□□□□ -0
CPSF7-223ENST00000544669 KIF18AQ8NI77 898 aa15.04■□□□□ -0
CPSF7-223ENST00000544669 STAG1Q8WVM7 1258 aa15.04■□□□□ -0
CPSF7-223ENST00000544669 ANKRD7Q92527 254 aa15.04■□□□□ -0
CPSF7-223ENST00000544669 FOXP1Q9H334 677 aaPredicted RBP15.04■□□□□ -0
CPSF7-223ENST00000544669 BCL2L12Q9HB09 334 aa15.04■□□□□ -0
CPSF7-223ENST00000544669 CGNQ9P2M7 1197 aaKnown RBP15.04■□□□□ -0
CPSF7-223ENST00000544669 THRAP3Q9Y2W1 955 aaKnown RBP15.04■□□□□ -0
CPSF7-223ENST00000544669 PRKCSHP14314 528 aaPredicted RBP15.03■□□□□ -0
CPSF7-223ENST00000544669 SFPQP23246 707 aaKnown RBP eCLIP15.03■□□□□ -0
CPSF7-223ENST00000544669 PHKA1P46020 1223 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 LRMPQ12912 555 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 RESP18Q5W5W9 173 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 TBC1D10CQ8IV04 446 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 SMAP1Q8IYB5 467 aaPredicted RBP15.03■□□□□ -0
CPSF7-223ENST00000544669 ZNF579Q8NAF0 562 aaKnown RBP15.03■□□□□ -0
CPSF7-223ENST00000544669 LY9Q9HBG7 655 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 GPHNQ9NQX3 736 aaPredicted RBP15.03■□□□□ -0
CPSF7-223ENST00000544669 ZNF652Q9Y2D9 606 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 XIRP1Q702N8 1843 aaKnown RBP15.03■□□□□ -0
CPSF7-223ENST00000544669 B4E1Z4 1266 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 DEXIO95424 95 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 BMP15O95972 392 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 CCDC144BQ3MJ40 725 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 CYB5R4Q7L1T6 521 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 FILIP1Q7Z7B0 1213 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 CCDC144CPQ8IYA2 1237 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 KRI1Q8N9T8 703 aaKnown RBP15.03■□□□□ -0
CPSF7-223ENST00000544669 TRIML1Q8N9V2 468 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 C16orf45Q96MC5 204 aaPredicted RBP15.03■□□□□ -0
CPSF7-223ENST00000544669 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.03■□□□□ -0
CPSF7-223ENST00000544669 ZBTB1Q9Y2K1 713 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 NWD2Q9ULI1 1742 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 TOGARAM1Q9Y4F4 1720 aa15.03■□□□□ -0
CPSF7-223ENST00000544669 EIF5P55010 431 aaKnown RBP15.02■□□□□ -0
CPSF7-223ENST00000544669 MYL5Q02045 173 aa15.02■□□□□ -0
CPSF7-223ENST00000544669 NTRK3Q16288 839 aa15.02■□□□□ -0
CPSF7-223ENST00000544669 OTUD7BQ6GQQ9 843 aa15.02■□□□□ -0
CPSF7-223ENST00000544669 NYAP1Q6ZVC0 841 aa15.02■□□□□ -0
CPSF7-223ENST00000544669 NOSTRINQ8IVI9 506 aa15.02■□□□□ -0
CPSF7-223ENST00000544669 MYH7P12883 1935 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms