RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 ADALQ6DHV7 355 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 KCNG4Q8TDN1 519 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 TRIM5Q9C035 493 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 THRAP3Q9Y2W1 955 aaKnown RBP14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 A0A1W2PQ27 194 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 A0A1W2PQ64 194 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 A0A1W2PQD8 194 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 YEATS4O95619 227 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 METAP2P50579 478 aaKnown RBP eCLIP14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 ZNF75DP51815 510 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 CCDC152Q4G0S7 254 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 TMEM87BQ96K49 555 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 POLR3EQ9NVU0 708 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 GOLGA6L19H0YKK7 550 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 POLR3DP05423 398 aaPredicted RBP14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 CPLX2Q6PUV4 134 aaKnown RBP14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 CERS3Q8IU89 383 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 DRC7Q8IY82 874 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 MAGEB6Q8N7X4 407 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 LINC00301Q8NCQ3 95 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 KCNF1Q9H3M0 494 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 SPATA31A1Q5TZJ5 1347 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 RREB1Q92766 1687 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 B4E1Z4 1266 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 PATL2C9JE40 543 aaKnown RBP14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 CAMTA2O94983 1202 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 IGHMBP2P38935 993 aaKnown RBP14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 RASGRF1Q13972 1273 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 MYSM1Q5VVJ2 828 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 SYNE3Q6ZMZ3 975 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 PLA2G4DQ86XP0 818 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 ACSBG1Q96GR2 724 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 SEC31BQ9NQW1 1179 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 DENND2AQ9ULE3 1009 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 CHD4Q14839 1912 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 ERICH4A6NGS2 130 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 NAPBQ9H115 298 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 ANO10Q9NW15 660 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 CLIC4Q9Y696 253 aa14.23□□□□□ -0.13
LRTOMT-221ENST00000544409 LOC102724428A0A0B4J2F2 783 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 MBD4O95243 580 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 SIK1P57059 783 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 TRERF1Q96PN7 1200 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 LAMB2P55268 1798 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 NRAPQ86VF7 1730 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 NEDD4P46934 1319 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 KIF23Q02241 960 aaPredicted RBP14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 IQCB1Q15051 598 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 IFNL3Q8IZI9 196 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 KIAA1524Q8TCG1 905 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 PYCARDQ9ULZ3 195 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 SPTLC2O15270 562 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 PTGS1P23219 599 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 NAA30Q147X3 362 aaPredicted RBP14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 APOA5Q6Q788 366 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 NFXL1Q6ZNB6 911 aa14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 C11orf57Q6ZUT1 292 aaPredicted RBP14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 FMR1NBQ8N0W7 255 aaPredicted RBP14.22□□□□□ -0.13
LRTOMT-221ENST00000544409 ZBTB43O43298 467 aa14.21□□□□□ -0.13
LRTOMT-221ENST00000544409 GABPB1Q06547 395 aaPredicted RBP14.21□□□□□ -0.13
LRTOMT-221ENST00000544409 ALG1Q9BT22 464 aa14.21□□□□□ -0.13
LRTOMT-221ENST00000544409 NIP7Q9Y221 180 aaKnown RBP eCLIP14.21□□□□□ -0.13
LRTOMT-221ENST00000544409 KIF28PB7ZC32 967 aa14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 ADAMTS2O95450 1211 aa14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 NCBP1Q09161 790 aaKnown RBP14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 TMEM67Q5HYA8 995 aa14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 NKX2-3Q8TAU0 364 aa14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 IGDCC4Q8TDY8 1250 aa14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 TIGD1Q96MW7 591 aa14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 CNNM2Q9H8M5 875 aa14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 ARMT1Q9H993 441 aa14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 EPB41L4AQ9HCS5 686 aaPredicted RBP14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 GJB4Q9NTQ9 266 aa14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 CICQ96RK0 1608 aaPredicted RBP14.21□□□□□ -0.14
LRTOMT-221ENST00000544409 A0A1B0GVL5 298 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 SNAP23O00161 211 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 CTIFO43310 598 aaKnown RBP14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 NTSR2O95665 410 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 ANO1Q5XXA6 986 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 SGMS1Q86VZ5 419 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 MICU3Q86XE3 530 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 SDF4Q9BRK5 362 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 CCDC66A2RUB6 948 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 GOLGA8AA7E2F4 631 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 BECN2A8MW95 431 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 GNAT2P19087 354 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 CDC25BP30305 580 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 ITPK1Q13572 414 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 SARM1Q6SZW1 724 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 CCDC186Q7Z3E2 898 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 TIAM2Q8IVF5 1701 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 MARCH10Q8NA82 808 aaPredicted RBP14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 LY9Q9HBG7 655 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 MYH14Q7Z406 1995 aaKnown RBP14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 RXRAP19793 462 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 NDUFA8P51970 172 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 CEP57L1Q8IYX8 460 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms