RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CHRNA5P30532 468 aa16.15■□□□□ 0.18
HCFC2-202ENST00000544223 CHMP4CQ96CF2 233 aa16.15■□□□□ 0.18
HCFC2-202ENST00000544223 WDR33Q9C0J8 1336 aaKnown RBP16.15■□□□□ 0.18
HCFC2-202ENST00000544223 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
HCFC2-202ENST00000544223 MCM5P33992 734 aa16.15■□□□□ 0.18
HCFC2-202ENST00000544223 CLEC17AQ6ZS10 378 aa16.15■□□□□ 0.18
HCFC2-202ENST00000544223 FBXW7Q969H0 707 aa16.15■□□□□ 0.18
HCFC2-202ENST00000544223 ALDH8A1Q9H2A2 487 aaPredicted RBP16.15■□□□□ 0.18
HCFC2-202ENST00000544223 UBE2Q2LH0YL09 131 aa16.14■□□□□ 0.17
HCFC2-202ENST00000544223 SRGNP10124 158 aa16.14■□□□□ 0.17
HCFC2-202ENST00000544223 CYP2D6P10635 497 aa16.14■□□□□ 0.17
HCFC2-202ENST00000544223 DNM1Q05193 864 aaKnown RBP16.14■□□□□ 0.17
HCFC2-202ENST00000544223 TBC1D16Q8TBP0 767 aa16.14■□□□□ 0.17
HCFC2-202ENST00000544223 ZSWIM5Q9P217 1185 aa16.14■□□□□ 0.17
HCFC2-202ENST00000544223 GGA1Q9UJY5 639 aa16.14■□□□□ 0.17
HCFC2-202ENST00000544223 PARP3Q9Y6F1 533 aa16.14■□□□□ 0.17
HCFC2-202ENST00000544223 PPEF1O14829 653 aaPredicted RBP16.14■□□□□ 0.17
HCFC2-202ENST00000544223 F13A1P00488 732 aa16.14■□□□□ 0.17
HCFC2-202ENST00000544223 OTUD7BQ6GQQ9 843 aa16.14■□□□□ 0.17
HCFC2-202ENST00000544223 CAMKK2Q96RR4 588 aa16.14■□□□□ 0.17
HCFC2-202ENST00000544223 GOLGA8BA8MQT2 603 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 FIBPO43427 364 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 DOK7Q18PE1 504 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 CAVIN1Q6NZI2 390 aaKnown RBP16.13■□□□□ 0.17
HCFC2-202ENST00000544223 TICAM2Q86XR7 235 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 NSUN7Q8NE18 718 aaKnown RBP16.13■□□□□ 0.17
HCFC2-202ENST00000544223 HPS5Q9UPZ3 1129 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 F8W031 263 aaPredicted RBP16.13■□□□□ 0.17
HCFC2-202ENST00000544223 GOLGA6L22H0YM25 854 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 PFKFB2O60825 505 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 TRDNQ13061 729 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 USP48Q86UV5 1035 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 DZIP1Q86YF9 867 aaKnown RBP16.13■□□□□ 0.17
HCFC2-202ENST00000544223 AGXT2Q9BYV1 514 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 KCNQ5Q9NR82 932 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 CHD4Q14839 1912 aa16.13■□□□□ 0.17
HCFC2-202ENST00000544223 PTPDC1A2A3K4 754 aa16.12■□□□□ 0.17
HCFC2-202ENST00000544223 SLC15A2Q16348 729 aa16.12■□□□□ 0.17
HCFC2-202ENST00000544223 BRIP1Q9BX63 1249 aa16.12■□□□□ 0.17
HCFC2-202ENST00000544223 CD209Q9NNX6 404 aa16.12■□□□□ 0.17
HCFC2-202ENST00000544223 LEMD3Q9Y2U8 911 aa16.12■□□□□ 0.17
HCFC2-202ENST00000544223 MICU3Q86XE3 530 aa16.12■□□□□ 0.17
HCFC2-202ENST00000544223 CMTR1Q8N1G2 835 aaKnown RBP16.12■□□□□ 0.17
HCFC2-202ENST00000544223 COL11A2P13942 1736 aaPredicted RBP16.12■□□□□ 0.17
HCFC2-202ENST00000544223 HOXA10P31260 410 aaPredicted RBP16.11■□□□□ 0.17
HCFC2-202ENST00000544223 ADD1P35611 737 aaKnown RBP16.11■□□□□ 0.17
HCFC2-202ENST00000544223 CCDC82Q8N4S0 544 aa16.11■□□□□ 0.17
HCFC2-202ENST00000544223 TDRD7Q8NHU6 1098 aaKnown RBP16.11■□□□□ 0.17
HCFC2-202ENST00000544223 TFIP11Q9UBB9 837 aaKnown RBP16.11■□□□□ 0.17
HCFC2-202ENST00000544223 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
HCFC2-202ENST00000544223 USP17L21D6R901 530 aa16.11■□□□□ 0.17
HCFC2-202ENST00000544223 BBOX1O75936 387 aa16.11■□□□□ 0.17
HCFC2-202ENST00000544223 PPARAQ07869 468 aa16.11■□□□□ 0.17
HCFC2-202ENST00000544223 MFSD6Q6ZSS7 791 aa16.11■□□□□ 0.17
HCFC2-202ENST00000544223 GAS2L3Q86XJ1 694 aa16.11■□□□□ 0.17
HCFC2-202ENST00000544223 KLRG2A4D1S0 409 aaPredicted RBP16.1■□□□□ 0.17
HCFC2-202ENST00000544223 LDHBP07195 334 aaKnown RBP16.1■□□□□ 0.17
HCFC2-202ENST00000544223 AKNAD1Q5T1N1 836 aa16.1■□□□□ 0.17
HCFC2-202ENST00000544223 ZNF804AQ7Z570 1209 aa16.1■□□□□ 0.17
HCFC2-202ENST00000544223 AIFM3Q96NN9 605 aa16.1■□□□□ 0.17
HCFC2-202ENST00000544223 NACAP1Q9BZK3 213 aa16.1■□□□□ 0.17
HCFC2-202ENST00000544223 MYH2Q9UKX2 1941 aa16.1■□□□□ 0.17
HCFC2-202ENST00000544223 FDPSP14324 419 aaKnown RBP16.1■□□□□ 0.17
HCFC2-202ENST00000544223 CEBPZQ03701 1054 aaKnown RBP16.1■□□□□ 0.17
HCFC2-202ENST00000544223 SH3RF3Q8TEJ3 882 aaPredicted RBP16.1■□□□□ 0.17
HCFC2-202ENST00000544223 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
HCFC2-202ENST00000544223 NMT2O60551 498 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 USP17L8P0C7I0 530 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 GTF2IP78347 998 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 TMEM67Q5HYA8 995 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 CTR9Q6PD62 1173 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 NFXL1Q6ZNB6 911 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 IGDCC4Q8TDY8 1250 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 PHKBQ93100 1093 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 IFIT3O14879 490 aaKnown RBP16.09■□□□□ 0.17
HCFC2-202ENST00000544223 CDC27P30260 824 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 ALX1Q15699 326 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 C2CD5Q86YS7 1000 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 FAM184AQ8NB25 1140 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 CRAMP1Q96RY5 1269 aa16.09■□□□□ 0.17
HCFC2-202ENST00000544223 SH2B2O14492 632 aaPredicted RBP16.08■□□□□ 0.17
HCFC2-202ENST00000544223 MFSD14BQ5SR56 506 aa16.08■□□□□ 0.17
HCFC2-202ENST00000544223 LY9Q9HBG7 655 aa16.08■□□□□ 0.17
HCFC2-202ENST00000544223 SAP30BPQ9UHR5 308 aaKnown RBP16.08■□□□□ 0.17
HCFC2-202ENST00000544223 ANGEL1Q9UNK9 670 aaKnown RBP16.08■□□□□ 0.17
HCFC2-202ENST00000544223 SEMA3EO15041 775 aa16.08■□□□□ 0.16
HCFC2-202ENST00000544223 FAM47AQ5JRC9 791 aa16.08■□□□□ 0.16
HCFC2-202ENST00000544223 DBNDD1Q9H9R9 158 aa16.08■□□□□ 0.16
HCFC2-202ENST00000544223 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
HCFC2-202ENST00000544223 ATP6V0A2Q9Y487 856 aa16.08■□□□□ 0.16
HCFC2-202ENST00000544223 CCDC88AQ3V6T2 1871 aa16.07■□□□□ 0.16
HCFC2-202ENST00000544223 RANBP6O60518 1105 aaKnown RBP16.07■□□□□ 0.16
HCFC2-202ENST00000544223 GNAT2P19087 354 aa16.07■□□□□ 0.16
HCFC2-202ENST00000544223 ATP2B4P23634 1241 aa16.07■□□□□ 0.16
HCFC2-202ENST00000544223 DYNLL2Q96FJ2 89 aa16.07■□□□□ 0.16
HCFC2-202ENST00000544223 ZNF274Q96GC6 653 aaPredicted RBP16.07■□□□□ 0.16
HCFC2-202ENST00000544223 TMEM63CQ9P1W3 806 aa16.07■□□□□ 0.16
HCFC2-202ENST00000544223 H3BQV1 296 aa16.07■□□□□ 0.16
HCFC2-202ENST00000544223 NPR1P16066 1061 aa16.07■□□□□ 0.16
HCFC2-202ENST00000544223 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms