RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 MYH2Q9UKX2 1941 aa23.42■■□□□ 1.34
COPS7A-218ENST00000543939 NEDD4P46934 1319 aa23.41■■□□□ 1.34
COPS7A-218ENST00000543939 WDR33Q9C0J8 1336 aaKnown RBP23.41■■□□□ 1.34
COPS7A-218ENST00000543939 SYT1P21579 422 aa23.41■■□□□ 1.34
COPS7A-218ENST00000543939 GRIK5Q16478 980 aa23.41■■□□□ 1.34
COPS7A-218ENST00000543939 AKNAD1Q5T1N1 836 aa23.41■■□□□ 1.34
COPS7A-218ENST00000543939 GIMAP6Q6P9H5 292 aa23.41■■□□□ 1.34
COPS7A-218ENST00000543939 NKX2-3Q8TAU0 364 aa23.41■■□□□ 1.34
COPS7A-218ENST00000543939 TACC3Q9Y6A5 838 aa23.41■■□□□ 1.34
COPS7A-218ENST00000543939 SCRN1Q12765 414 aa23.4■■□□□ 1.34
COPS7A-218ENST00000543939 DPP8Q6V1X1 898 aaPredicted RBP23.4■■□□□ 1.34
COPS7A-218ENST00000543939 CYB5R4Q7L1T6 521 aa23.4■■□□□ 1.34
COPS7A-218ENST00000543939 STAG1Q8WVM7 1258 aa23.4■■□□□ 1.34
COPS7A-218ENST00000543939 COA1Q9GZY4 146 aa23.4■■□□□ 1.34
COPS7A-218ENST00000543939 TMX4Q9H1E5 349 aaPredicted RBP23.4■■□□□ 1.34
COPS7A-218ENST00000543939 GPHNQ9NQX3 736 aaPredicted RBP23.4■■□□□ 1.34
COPS7A-218ENST00000543939 AATFQ9NY61 560 aaKnown RBP eCLIP23.4■■□□□ 1.34
COPS7A-218ENST00000543939 ANAPC4Q9UJX5 808 aa23.4■■□□□ 1.34
COPS7A-218ENST00000543939 FAM205AQ6ZU69 1335 aa23.4■■□□□ 1.34
COPS7A-218ENST00000543939 GSTO1P78417 241 aa23.39■■□□□ 1.34
COPS7A-218ENST00000543939 CNNM2Q9H8M5 875 aa23.39■■□□□ 1.34
COPS7A-218ENST00000543939 B4E1Z4 1266 aa23.39■■□□□ 1.33
COPS7A-218ENST00000543939 STX6O43752 255 aa23.39■■□□□ 1.33
COPS7A-218ENST00000543939 DTNBO60941 627 aa23.39■■□□□ 1.33
COPS7A-218ENST00000543939 PDIA3P30101 505 aaKnown RBP23.39■■□□□ 1.33
COPS7A-218ENST00000543939 CHRNA5P30532 468 aa23.39■■□□□ 1.33
COPS7A-218ENST00000543939 PPARAQ07869 468 aa23.39■■□□□ 1.33
COPS7A-218ENST00000543939 FOXD4L5Q5VV16 416 aaPredicted RBP23.39■■□□□ 1.33
COPS7A-218ENST00000543939 FOXD4L4Q8WXT5 416 aaPredicted RBP23.39■■□□□ 1.33
COPS7A-218ENST00000543939 CRNKL1Q9BZJ0 848 aaKnown RBP23.39■■□□□ 1.33
COPS7A-218ENST00000543939 RIMBP2O15034 1052 aa23.38■■□□□ 1.33
COPS7A-218ENST00000543939 CCDC125Q86Z20 511 aa23.38■■□□□ 1.33
COPS7A-218ENST00000543939 SLC16A10Q8TF71 515 aa23.38■■□□□ 1.33
COPS7A-218ENST00000543939 TBC1D22AQ8WUA7 517 aa23.38■■□□□ 1.33
COPS7A-218ENST00000543939 CNKSR1Q969H4 720 aa23.38■■□□□ 1.33
COPS7A-218ENST00000543939 ZC3H12CQ9C0D7 883 aaKnown RBP23.38■■□□□ 1.33
COPS7A-218ENST00000543939 INCENPQ9NQS7 918 aa23.38■■□□□ 1.33
COPS7A-218ENST00000543939 DLEC1Q9Y238 1755 aa23.38■■□□□ 1.33
COPS7A-218ENST00000543939 LAMB1P07942 1786 aa23.37■■□□□ 1.33
COPS7A-218ENST00000543939 MFSD6Q6ZSS7 791 aa23.37■■□□□ 1.33
COPS7A-218ENST00000543939 C10orf71Q711Q0 1435 aa23.37■■□□□ 1.33
COPS7A-218ENST00000543939 LLPHQ9BRT6 129 aaKnown RBP23.37■■□□□ 1.33
COPS7A-218ENST00000543939 KRT23Q9C075 422 aa23.37■■□□□ 1.33
COPS7A-218ENST00000543939 LDHCP07864 332 aa23.36■■□□□ 1.33
COPS7A-218ENST00000543939 ZSCAN22P10073 491 aaPredicted RBP23.36■■□□□ 1.33
COPS7A-218ENST00000543939 PTMSP20962 102 aa23.36■■□□□ 1.33
COPS7A-218ENST00000543939 RNF41Q9H4P4 317 aaPredicted RBP23.36■■□□□ 1.33
COPS7A-218ENST00000543939 BRPF3Q9ULD4 1205 aa23.36■■□□□ 1.33
COPS7A-218ENST00000543939 GOLGA6L22H0YM25 854 aa23.36■■□□□ 1.33
COPS7A-218ENST00000543939 PPP4CP60510 307 aa23.36■■□□□ 1.33
COPS7A-218ENST00000543939 TMEM87BQ96K49 555 aa23.36■■□□□ 1.33
COPS7A-218ENST00000543939 ATP8A2Q9NTI2 1148 aa23.36■■□□□ 1.33
COPS7A-218ENST00000543939 MINDY4BA8MYZ0 360 aa23.35■■□□□ 1.33
COPS7A-218ENST00000543939 SH2B2O14492 632 aaPredicted RBP23.35■■□□□ 1.33
COPS7A-218ENST00000543939 PDIA4P13667 645 aaKnown RBP23.35■■□□□ 1.33
COPS7A-218ENST00000543939 DIXDC1Q155Q3 683 aa23.35■■□□□ 1.33
COPS7A-218ENST00000543939 MFSD14BQ5SR56 506 aa23.35■■□□□ 1.33
COPS7A-218ENST00000543939 SMARCC2Q8TAQ2 1214 aa23.35■■□□□ 1.33
COPS7A-218ENST00000543939 EYA3Q99504 573 aa23.35■■□□□ 1.33
COPS7A-218ENST00000543939 DCP1AQ9NPI6 582 aaPredicted RBP23.35■■□□□ 1.33
COPS7A-218ENST00000543939 ANGEL1Q9UNK9 670 aaKnown RBP23.35■■□□□ 1.33
COPS7A-218ENST00000543939 MROH7-TTC4A0A0A0MT08 1334 aa23.34■■□□□ 1.33
COPS7A-218ENST00000543939 JAK2O60674 1132 aa23.34■■□□□ 1.33
COPS7A-218ENST00000543939 MCTP1Q6DN14 999 aa23.34■■□□□ 1.33
COPS7A-218ENST00000543939 CTR9Q6PD62 1173 aa23.34■■□□□ 1.33
COPS7A-218ENST00000543939 IGDCC4Q8TDY8 1250 aa23.34■■□□□ 1.33
COPS7A-218ENST00000543939 C7orf43Q8WVR3 580 aa23.34■■□□□ 1.33
COPS7A-218ENST00000543939 CHMP4CQ96CF2 233 aa23.34■■□□□ 1.33
COPS7A-218ENST00000543939 ZSWIM5Q9P217 1185 aa23.34■■□□□ 1.33
COPS7A-218ENST00000543939 MTMR6Q9Y217 621 aa23.34■■□□□ 1.33
COPS7A-218ENST00000543939 CDK5RAP2Q96SN8 1893 aa23.34■■□□□ 1.33
COPS7A-218ENST00000543939 KLF18A0A0U1RQI7 1052 aa23.33■■□□□ 1.33
COPS7A-218ENST00000543939 TRAK2O60296 914 aa23.33■■□□□ 1.33
COPS7A-218ENST00000543939 KDM4AO75164 1064 aa23.33■■□□□ 1.33
COPS7A-218ENST00000543939 PDCP20941 246 aa23.33■■□□□ 1.33
COPS7A-218ENST00000543939 GTF2IP78347 998 aa23.33■■□□□ 1.33
COPS7A-218ENST00000543939 CCT2P78371 535 aaKnown RBP23.33■■□□□ 1.33
COPS7A-218ENST00000543939 LARP1BQ659C4 914 aaKnown RBP23.33■■□□□ 1.33
COPS7A-218ENST00000543939 NSUN7Q8NE18 718 aaKnown RBP23.33■■□□□ 1.33
COPS7A-218ENST00000543939 CTDNEP1O95476 244 aa23.33■■□□□ 1.32
COPS7A-218ENST00000543939 RTFDC1Q9BY42 306 aaPredicted RBP23.33■■□□□ 1.32
COPS7A-218ENST00000543939 NAP1L2Q9ULW6 460 aaPredicted RBP23.33■■□□□ 1.32
COPS7A-218ENST00000543939 HPS5Q9UPZ3 1129 aa23.33■■□□□ 1.32
COPS7A-218ENST00000543939 USP17L12C9JPN9 530 aa23.32■■□□□ 1.32
COPS7A-218ENST00000543939 USP17L21D6R901 530 aa23.32■■□□□ 1.32
COPS7A-218ENST00000543939 BAG3O95817 575 aa23.32■■□□□ 1.32
COPS7A-218ENST00000543939 SBK1Q52WX2 424 aa23.32■■□□□ 1.32
COPS7A-218ENST00000543939 FAM163AQ96GL9 167 aaPredicted RBP23.32■■□□□ 1.32
COPS7A-218ENST00000543939 NCOA5Q9HCD5 579 aaKnown RBP23.32■■□□□ 1.32
COPS7A-218ENST00000543939 SNED1Q8TER0 1413 aa23.32■■□□□ 1.32
COPS7A-218ENST00000543939 TCHHQ07283 1943 aa23.32■■□□□ 1.32
COPS7A-218ENST00000543939 KIF13BQ9NQT8 1826 aa23.31■■□□□ 1.32
COPS7A-218ENST00000543939 CYP2D7A0A087X1C5 515 aa23.31■■□□□ 1.32
COPS7A-218ENST00000543939 SMIM22K7EJ46 135 aa23.31■■□□□ 1.32
COPS7A-218ENST00000543939 F13A1P00488 732 aa23.31■■□□□ 1.32
COPS7A-218ENST00000543939 FGRP09769 529 aa23.31■■□□□ 1.32
COPS7A-218ENST00000543939 CHAMP1Q96JM3 812 aa23.31■■□□□ 1.32
COPS7A-218ENST00000543939 NOL10Q9BSC4 688 aaKnown RBP23.31■■□□□ 1.32
COPS7A-218ENST00000543939 MTA3Q9BTC8 594 aa23.31■■□□□ 1.32
COPS7A-218ENST00000543939 LY9Q9HBG7 655 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms