RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CDC42EP5Q6NZY7 148 aa18.34■□□□□ 0.53
CD9-210ENST00000543916 FOCADQ5VW36 1801 aa18.34■□□□□ 0.53
CD9-210ENST00000543916 GPR75-ASB3A0A0A6YYF3 556 aa18.33■□□□□ 0.52
CD9-210ENST00000543916 IGSF3O75054 1194 aa18.33■□□□□ 0.52
CD9-210ENST00000543916 GLRX3O76003 335 aaKnown RBP18.33■□□□□ 0.52
CD9-210ENST00000543916 MAP4K4O95819 1239 aaPredicted RBP18.33■□□□□ 0.52
CD9-210ENST00000543916 LDHCP07864 332 aa18.33■□□□□ 0.52
CD9-210ENST00000543916 PDE4AP27815 886 aa18.33■□□□□ 0.52
CD9-210ENST00000543916 MAP3K12Q12852 859 aa18.33■□□□□ 0.52
CD9-210ENST00000543916 PRAMEF18Q5VWM3 479 aa18.33■□□□□ 0.52
CD9-210ENST00000543916 PLEKHM2Q8IWE5 1019 aa18.33■□□□□ 0.52
CD9-210ENST00000543916 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.52
CD9-210ENST00000543916 CDCA5Q96FF9 252 aa18.33■□□□□ 0.52
CD9-210ENST00000543916 USP40Q9NVE5 1235 aa18.33■□□□□ 0.52
CD9-210ENST00000543916 CNTNAP1P78357 1384 aa18.32■□□□□ 0.52
CD9-210ENST00000543916 RFX7Q2KHR2 1363 aa18.32■□□□□ 0.52
CD9-210ENST00000543916 TCP10L2B9ZVM9 353 aa18.32■□□□□ 0.52
CD9-210ENST00000543916 HSPA6P17066 643 aa18.32■□□□□ 0.52
CD9-210ENST00000543916 CYP7A1P22680 504 aa18.32■□□□□ 0.52
CD9-210ENST00000543916 APLP1P51693 650 aa18.32■□□□□ 0.52
CD9-210ENST00000543916 DEFB129Q9H1M3 183 aa18.32■□□□□ 0.52
CD9-210ENST00000543916 SSC5DA1L4H1 1573 aa18.31■□□□□ 0.52
CD9-210ENST00000543916 PDE6AP16499 860 aa18.31■□□□□ 0.52
CD9-210ENST00000543916 RHBDL3P58872 404 aa18.31■□□□□ 0.52
CD9-210ENST00000543916 SLC9C2Q5TAH2 1124 aa18.31■□□□□ 0.52
CD9-210ENST00000543916 CST9Q5W186 159 aa18.31■□□□□ 0.52
CD9-210ENST00000543916 CENPQQ7L2Z9 268 aaPredicted RBP18.31■□□□□ 0.52
CD9-210ENST00000543916 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
CD9-210ENST00000543916 ZNF408Q9H9D4 720 aa18.31■□□□□ 0.52
CD9-210ENST00000543916 TMOD2Q9NZR1 351 aa18.31■□□□□ 0.52
CD9-210ENST00000543916 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
CD9-210ENST00000543916 TCRBV5S4A2TA0A5A2 114 aa18.3■□□□□ 0.52
CD9-210ENST00000543916 CELF2O95319 508 aaKnown RBP18.3■□□□□ 0.52
CD9-210ENST00000543916 CHGBP05060 677 aa18.3■□□□□ 0.52
CD9-210ENST00000543916 NFIAQ12857 509 aa18.3■□□□□ 0.52
CD9-210ENST00000543916 TNFAIP1Q13829 316 aa18.3■□□□□ 0.52
CD9-210ENST00000543916 RASA3Q14644 834 aa18.3■□□□□ 0.52
CD9-210ENST00000543916 SLFNL1Q499Z3 407 aa18.3■□□□□ 0.52
CD9-210ENST00000543916 KBTBD3Q8NAB2 608 aa18.3■□□□□ 0.52
CD9-210ENST00000543916 OSBPL3Q9H4L5 887 aa18.3■□□□□ 0.52
CD9-210ENST00000543916 AATFQ9NY61 560 aaKnown RBP eCLIP18.3■□□□□ 0.52
CD9-210ENST00000543916 PPP2R3BQ9Y5P8 575 aa18.3■□□□□ 0.52
CD9-210ENST00000543916 ZNF532Q9HCE3 1301 aa18.29■□□□□ 0.52
CD9-210ENST00000543916 ADD2P35612 726 aa18.29■□□□□ 0.52
CD9-210ENST00000543916 DYNLL1P63167 89 aaKnown RBP18.29■□□□□ 0.52
CD9-210ENST00000543916 HTRA3P83110 453 aa18.29■□□□□ 0.52
CD9-210ENST00000543916 FKBP1CQ5VVH2 108 aa18.29■□□□□ 0.52
CD9-210ENST00000543916 CDAN1Q8IWY9 1227 aa18.29■□□□□ 0.52
CD9-210ENST00000543916 SH3RF3Q8TEJ3 882 aaPredicted RBP18.29■□□□□ 0.52
CD9-210ENST00000543916 TMEM39BQ9GZU3 492 aa18.29■□□□□ 0.52
CD9-210ENST00000543916 FAM198AQ9UFP1 575 aa18.29■□□□□ 0.52
CD9-210ENST00000543916 PAPPA2Q9BXP8 1791 aa18.29■□□□□ 0.52
CD9-210ENST00000543916 TMEM88BA6NKF7 163 aa18.28■□□□□ 0.52
CD9-210ENST00000543916 WDHD1O75717 1129 aaPredicted RBP18.28■□□□□ 0.52
CD9-210ENST00000543916 TNNI2P48788 182 aa18.28■□□□□ 0.52
CD9-210ENST00000543916 ERICH6BQ5W0A0 696 aa18.28■□□□□ 0.52
CD9-210ENST00000543916 TMED8Q6PL24 325 aaPredicted RBP18.28■□□□□ 0.52
CD9-210ENST00000543916 MIGA1Q8NAN2 632 aa18.28■□□□□ 0.52
CD9-210ENST00000543916 TEPSINQ96N21 525 aa18.28■□□□□ 0.52
CD9-210ENST00000543916 NOL10Q9BSC4 688 aaKnown RBP18.28■□□□□ 0.52
CD9-210ENST00000543916 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.28■□□□□ 0.52
CD9-210ENST00000543916 DDX4Q9NQI0 724 aaKnown RBP18.28■□□□□ 0.52
CD9-210ENST00000543916 BAG3O95817 575 aa18.27■□□□□ 0.52
CD9-210ENST00000543916 RGS3P49796 1198 aa18.27■□□□□ 0.52
CD9-210ENST00000543916 PPP4CP60510 307 aa18.27■□□□□ 0.52
CD9-210ENST00000543916 TCP10Q12799 353 aa18.27■□□□□ 0.52
CD9-210ENST00000543916 NBPF12Q5TAG4 269 aaPredicted RBP18.27■□□□□ 0.52
CD9-210ENST00000543916 FAM83AQ86UY5 434 aa18.27■□□□□ 0.52
CD9-210ENST00000543916 IDI2Q9BXS1 227 aa18.27■□□□□ 0.52
CD9-210ENST00000543916 CREBZFQ9NS37 354 aa18.27■□□□□ 0.52
CD9-210ENST00000543916 DDX60LQ5H9U9 1706 aaKnown RBP18.26■□□□□ 0.51
CD9-210ENST00000543916 OTOFQ9HC10 1997 aa18.26■□□□□ 0.51
CD9-210ENST00000543916 ZFPM1Q8IX07 1006 aa18.26■□□□□ 0.51
CD9-210ENST00000543916 TEX11Q8IYF3 940 aa18.26■□□□□ 0.51
CD9-210ENST00000543916 FAM151AQ8WW52 585 aa18.26■□□□□ 0.51
CD9-210ENST00000543916 NAV1Q8NEY1 1877 aa18.26■□□□□ 0.51
CD9-210ENST00000543916 RPAP1Q9BWH6 1393 aaPredicted RBP18.26■□□□□ 0.51
CD9-210ENST00000543916 PLCG2P16885 1265 aa18.25■□□□□ 0.51
CD9-210ENST00000543916 PICALMQ13492 652 aa18.25■□□□□ 0.51
CD9-210ENST00000543916 UBE3CQ15386 1083 aa18.25■□□□□ 0.51
CD9-210ENST00000543916 ZSCAN25Q6NSZ9 544 aa18.25■□□□□ 0.51
CD9-210ENST00000543916 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
CD9-210ENST00000543916 RIOK1Q9BRS2 568 aaKnown RBP18.25■□□□□ 0.51
CD9-210ENST00000543916 FSD1Q9BTV5 496 aa18.25■□□□□ 0.51
CD9-210ENST00000543916 GBA2Q9HCG7 927 aaPredicted RBP18.25■□□□□ 0.51
CD9-210ENST00000543916 PPP4R2Q9NY27 417 aa18.25■□□□□ 0.51
CD9-210ENST00000543916 SIPA1L1O43166 1804 aa18.25■□□□□ 0.51
CD9-210ENST00000543916 MAGEB6P1A0A0J9YX57 407 aa18.24■□□□□ 0.51
CD9-210ENST00000543916 ENTPD3O75355 529 aa18.24■□□□□ 0.51
CD9-210ENST00000543916 FZD1Q9UP38 647 aa18.24■□□□□ 0.51
CD9-210ENST00000543916 MYH1P12882 1939 aa18.23■□□□□ 0.51
CD9-210ENST00000543916 RNF113AO15541 343 aaKnown RBP18.23■□□□□ 0.51
CD9-210ENST00000543916 NF2P35240 595 aa18.23■□□□□ 0.51
CD9-210ENST00000543916 PRKG1Q13976 671 aa18.23■□□□□ 0.51
CD9-210ENST00000543916 MOB2Q70IA6 237 aa18.23■□□□□ 0.51
CD9-210ENST00000543916 SH3BP5LQ7L8J4 393 aa18.23■□□□□ 0.51
CD9-210ENST00000543916 LCORLQ8N3X6 602 aa18.23■□□□□ 0.51
CD9-210ENST00000543916 TGFBRAP1Q8WUH2 860 aa18.23■□□□□ 0.51
CD9-210ENST00000543916 EVI5LQ96CN4 794 aa18.23■□□□□ 0.51
CD9-210ENST00000543916 ABT1Q9ULW3 272 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms