RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 LRRC24Q50LG9 513 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 MUM1L1Q5H9M0 696 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 RALYLQ86SE5 291 aaKnown RBP27.24■■□□□ 1.95
SHD-201ENST00000543264 VPS37DQ86XT2 251 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 MB21D2Q8IYB1 491 aaPredicted RBP27.24■■□□□ 1.95
SHD-201ENST00000543264 JMYQ8N9B5 988 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 CNNM3Q8NE01 707 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 RABGGTAQ92696 567 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 DESI2Q9BSY9 194 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 ALG1Q9BT22 464 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 C19orf44Q9H6X5 657 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 FOXO4P98177 505 aa27.23■■□□□ 1.95
SHD-201ENST00000543264 ZNF594Q96JF6 807 aaPredicted RBP27.23■■□□□ 1.95
SHD-201ENST00000543264 STX10O60499 249 aa27.23■■□□□ 1.95
SHD-201ENST00000543264 HSP90AB3PQ58FF7 597 aa27.23■■□□□ 1.95
SHD-201ENST00000543264 CCDC102BQ68D86 513 aa27.23■■□□□ 1.95
SHD-201ENST00000543264 GOLGA1Q92805 767 aa27.23■■□□□ 1.95
SHD-201ENST00000543264 FOXP2O15409 715 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 TBX2Q13207 712 aaPredicted RBP27.22■■□□□ 1.95
SHD-201ENST00000543264 TC2NQ8N9U0 490 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 NCOA7Q8NI08 942 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 KIFC2Q96AC6 838 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 SIPA1L3O60292 1781 aaPredicted RBP27.22■■□□□ 1.95
SHD-201ENST00000543264 A0A1B0GUL7 405 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 FOXN1O15353 648 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 PPP6R2O75170 966 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 BMP6P22004 513 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 CCDC191Q8NCU4 936 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 CCDC12Q8WUD4 166 aaPredicted RBP27.22■■□□□ 1.95
SHD-201ENST00000543264 ADAM21Q9UKJ8 722 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 C5P01031 1676 aa27.22■■□□□ 1.95
SHD-201ENST00000543264 PTPAQ15257 358 aa27.21■■□□□ 1.95
SHD-201ENST00000543264 LONRF2Q1L5Z9 754 aa27.21■■□□□ 1.95
SHD-201ENST00000543264 ZBTB9Q96C00 473 aa27.21■■□□□ 1.95
SHD-201ENST00000543264 SNRPA1P09661 255 aaKnown RBP27.21■■□□□ 1.95
SHD-201ENST00000543264 RXRAP19793 462 aa27.21■■□□□ 1.95
SHD-201ENST00000543264 IL15P40933 162 aaPredicted RBP27.21■■□□□ 1.95
SHD-201ENST00000543264 LMAN1P49257 510 aa27.21■■□□□ 1.95
SHD-201ENST00000543264 RESP18Q5W5W9 173 aa27.21■■□□□ 1.95
SHD-201ENST00000543264 AFDNP55196 1824 aaKnown RBP27.21■■□□□ 1.95
SHD-201ENST00000543264 KRT40Q6A162 431 aa27.2■■□□□ 1.95
SHD-201ENST00000543264 THEMISQ8N1K5 641 aaPredicted RBP27.2■■□□□ 1.95
SHD-201ENST00000543264 AK7Q96M32 723 aa27.2■■□□□ 1.95
SHD-201ENST00000543264 IRX2Q9BZI1 471 aaPredicted RBP27.2■■□□□ 1.95
SHD-201ENST00000543264 GPR108Q9NPR9 543 aa27.2■■□□□ 1.95
SHD-201ENST00000543264 KCNH3Q9ULD8 1083 aa27.2■■□□□ 1.95
SHD-201ENST00000543264 MYO1BO43795 1136 aa27.2■■□□□ 1.94
SHD-201ENST00000543264 TXLNAP40222 546 aa27.2■■□□□ 1.94
SHD-201ENST00000543264 SPECC1Q5M775 1068 aa27.2■■□□□ 1.94
SHD-201ENST00000543264 SPECC1LQ69YQ0 1117 aa27.2■■□□□ 1.94
SHD-201ENST00000543264 H3BQF6 201 aa27.19■■□□□ 1.94
SHD-201ENST00000543264 TTC5Q8N0Z6 440 aa27.19■■□□□ 1.94
SHD-201ENST00000543264 ARHGAP23Q9P227 1491 aa27.19■■□□□ 1.94
SHD-201ENST00000543264 TICAM2Q86XR7 235 aa27.18■■□□□ 1.94
SHD-201ENST00000543264 PHKBQ93100 1093 aa27.18■■□□□ 1.94
SHD-201ENST00000543264 NFE2L3Q9Y4A8 694 aa27.18■■□□□ 1.94
SHD-201ENST00000543264 ZNF213O14771 459 aa27.18■■□□□ 1.94
SHD-201ENST00000543264 MAP3K14Q99558 947 aa27.18■■□□□ 1.94
SHD-201ENST00000543264 MTF1Q14872 753 aa27.17■■□□□ 1.94
SHD-201ENST00000543264 PUS3Q9BZE2 481 aaKnown RBP27.17■■□□□ 1.94
SHD-201ENST00000543264 EYA2O00167 538 aa27.16■■□□□ 1.94
SHD-201ENST00000543264 TRMT44Q8IYL2 757 aaKnown RBP27.16■■□□□ 1.94
SHD-201ENST00000543264 EXOC4Q96A65 974 aa27.16■■□□□ 1.94
SHD-201ENST00000543264 MRPL44Q9H9J2 332 aaKnown RBP27.16■■□□□ 1.94
SHD-201ENST00000543264 LCMT1Q9UIC8 334 aa27.16■■□□□ 1.94
SHD-201ENST00000543264 DENND2AQ9ULE3 1009 aa27.16■■□□□ 1.94
SHD-201ENST00000543264 FAM237AA0A1B0GTK4 181 aa27.16■■□□□ 1.94
SHD-201ENST00000543264 CCDC151A5D8V7 595 aa27.16■■□□□ 1.94
SHD-201ENST00000543264 CUTAO60888 179 aa27.16■■□□□ 1.94
SHD-201ENST00000543264 FMR1Q06787 632 aaKnown RBP eCLIP27.16■■□□□ 1.94
SHD-201ENST00000543264 JAKMIP3Q5VZ66 844 aa27.16■■□□□ 1.94
SHD-201ENST00000543264 PLBD2Q8NHP8 589 aa27.16■■□□□ 1.94
SHD-201ENST00000543264 PUS7LQ9H0K6 701 aaKnown RBP27.16■■□□□ 1.94
SHD-201ENST00000543264 LZTFL1Q9NQ48 299 aa27.16■■□□□ 1.94
SHD-201ENST00000543264 PUF60Q9UHX1 559 aaKnown RBP27.16■■□□□ 1.94
SHD-201ENST00000543264 H7C1W4 665 aa27.15■■□□□ 1.94
SHD-201ENST00000543264 METAP2P50579 478 aaKnown RBP eCLIP27.15■■□□□ 1.94
SHD-201ENST00000543264 MCM6Q14566 821 aa27.15■■□□□ 1.94
SHD-201ENST00000543264 C10orf67Q8IYJ2 551 aa27.15■■□□□ 1.94
SHD-201ENST00000543264 RAPGEF4Q8WZA2 1011 aa27.15■■□□□ 1.94
SHD-201ENST00000543264 CWC15Q9P013 229 aaKnown RBP27.15■■□□□ 1.94
SHD-201ENST00000543264 TRIM66O15016 1216 aa27.14■■□□□ 1.94
SHD-201ENST00000543264 CHMP4BP1P59074 171 aa27.14■■□□□ 1.94
SHD-201ENST00000543264 ZNF827Q17R98 1081 aa27.14■■□□□ 1.94
SHD-201ENST00000543264 MAN1B1Q9UKM7 699 aa27.14■■□□□ 1.94
SHD-201ENST00000543264 NWD2Q9ULI1 1742 aa27.14■■□□□ 1.94
SHD-201ENST00000543264 BRD3Q15059 726 aa27.14■■□□□ 1.94
SHD-201ENST00000543264 TTC39AQ5SRH9 613 aa27.14■■□□□ 1.94
SHD-201ENST00000543264 ZMYM6O95789 1325 aa27.13■■□□□ 1.93
SHD-201ENST00000543264 PLCD3Q8N3E9 789 aa27.13■■□□□ 1.93
SHD-201ENST00000543264 GOLGA5Q8TBA6 731 aa27.13■■□□□ 1.93
SHD-201ENST00000543264 RASSF4Q9H2L5 321 aa27.13■■□□□ 1.93
SHD-201ENST00000543264 PDE11AQ9HCR9 933 aa27.13■■□□□ 1.93
SHD-201ENST00000543264 KDM6AO15550 1401 aaPredicted RBP27.13■■□□□ 1.93
SHD-201ENST00000543264 MYO1CO00159 1063 aa27.13■■□□□ 1.93
SHD-201ENST00000543264 MAP2K7O14733 419 aa27.13■■□□□ 1.93
SHD-201ENST00000543264 MDM2Q00987 491 aaPredicted RBP27.13■■□□□ 1.93
SHD-201ENST00000543264 IPO4Q8TEX9 1081 aaKnown RBP27.13■■□□□ 1.93
SHD-201ENST00000543264 SOWAHDA6NJG2 315 aa27.12■■□□□ 1.93
SHD-201ENST00000543264 ADORA1P30542 326 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms