RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 FAM196AQ6ZSG2 479 aa19.24■□□□□ 0.67
KDM2B-216ENST00000543025 NBPF11Q86T75 865 aa19.24■□□□□ 0.67
KDM2B-216ENST00000543025 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.24■□□□□ 0.671e-6■■■■■ 28.2
KDM2B-216ENST00000543025 ZNF202O95125 648 aa19.24■□□□□ 0.67
KDM2B-216ENST00000543025 SLC3A2P08195 630 aaKnown RBP19.24■□□□□ 0.67
KDM2B-216ENST00000543025 KIF23Q02241 960 aaPredicted RBP19.24■□□□□ 0.67
KDM2B-216ENST00000543025 ANO1Q5XXA6 986 aa19.24■□□□□ 0.67
KDM2B-216ENST00000543025 CCDC85AQ96PX6 553 aaPredicted RBP19.24■□□□□ 0.67
KDM2B-216ENST00000543025 FEZ1Q99689 392 aa19.24■□□□□ 0.67
KDM2B-216ENST00000543025 KIF28PB7ZC32 967 aa19.23■□□□□ 0.67
KDM2B-216ENST00000543025 CSF1RP07333 972 aa19.23■□□□□ 0.67
KDM2B-216ENST00000543025 TRDNQ13061 729 aa19.23■□□□□ 0.67
KDM2B-216ENST00000543025 FAM89AQ96GI7 184 aa19.23■□□□□ 0.67
KDM2B-216ENST00000543025 ZSCAN20P17040 1043 aaPredicted RBP19.23■□□□□ 0.67
KDM2B-216ENST00000543025 TPM4P67936 248 aa19.23■□□□□ 0.67
KDM2B-216ENST00000543025 RAB11FIP4Q86YS3 637 aa19.23■□□□□ 0.67
KDM2B-216ENST00000543025 CCAR2Q8N163 923 aaKnown RBP19.23■□□□□ 0.67
KDM2B-216ENST00000543025 GJB4Q9NTQ9 266 aa19.23■□□□□ 0.67
KDM2B-216ENST00000543025 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
KDM2B-216ENST00000543025 MYH7P12883 1935 aa19.22■□□□□ 0.67
KDM2B-216ENST00000543025 CMA1P23946 247 aa19.22■□□□□ 0.67
KDM2B-216ENST00000543025 PI16Q6UXB8 463 aa19.22■□□□□ 0.67
KDM2B-216ENST00000543025 ZBTB38Q8NAP3 1195 aaPredicted RBP19.22■□□□□ 0.67
KDM2B-216ENST00000543025 CGNQ9P2M7 1197 aaKnown RBP19.22■□□□□ 0.67
KDM2B-216ENST00000543025 C4AP0C0L4 1744 aa19.22■□□□□ 0.67
KDM2B-216ENST00000543025 C4BP0C0L5 1744 aa19.22■□□□□ 0.67
KDM2B-216ENST00000543025 NLRP12P59046 1061 aa19.22■□□□□ 0.67
KDM2B-216ENST00000543025 KIF6Q6ZMV9 814 aa19.22■□□□□ 0.67
KDM2B-216ENST00000543025 CICQ96RK0 1608 aaPredicted RBP19.22■□□□□ 0.67
KDM2B-216ENST00000543025 SPDYE4A6NLX3 237 aa19.21■□□□□ 0.67
KDM2B-216ENST00000543025 PFKFB1P16118 471 aa19.21■□□□□ 0.67
KDM2B-216ENST00000543025 DMTNQ08495 405 aa19.21■□□□□ 0.67
KDM2B-216ENST00000543025 AXDND1Q5T1B0 1012 aaPredicted RBP19.21■□□□□ 0.67
KDM2B-216ENST00000543025 UTP14CQ5TAP6 766 aaKnown RBP19.21■□□□□ 0.67
KDM2B-216ENST00000543025 ANGEL1Q9UNK9 670 aaKnown RBP19.21■□□□□ 0.67
KDM2B-216ENST00000543025 RIC1Q4ADV7 1423 aa19.21■□□□□ 0.67
KDM2B-216ENST00000543025 KIF2AO00139 706 aaPredicted RBP19.21■□□□□ 0.67
KDM2B-216ENST00000543025 SMC2O95347 1197 aa19.21■□□□□ 0.67
KDM2B-216ENST00000543025 CCDC150Q8NCX0 1101 aa19.21■□□□□ 0.67
KDM2B-216ENST00000543025 SLC4A9Q96Q91 983 aa19.21■□□□□ 0.67
KDM2B-216ENST00000543025 XPO4Q9C0E2 1151 aaKnown RBP19.21■□□□□ 0.67
KDM2B-216ENST00000543025 TRMT1Q9NXH9 659 aaKnown RBP19.21■□□□□ 0.67
KDM2B-216ENST00000543025 ZMYM6O95789 1325 aa19.21■□□□□ 0.67
KDM2B-216ENST00000543025 LY75O60449 1722 aa19.21■□□□□ 0.67
KDM2B-216ENST00000543025 ADD2P35612 726 aa19.2■□□□□ 0.66
KDM2B-216ENST00000543025 MCAMP43121 646 aa19.2■□□□□ 0.66
KDM2B-216ENST00000543025 DHX8Q14562 1220 aaKnown RBP19.2■□□□□ 0.66
KDM2B-216ENST00000543025 METTL24Q5JXM2 366 aa19.2■□□□□ 0.66
KDM2B-216ENST00000543025 ZNF831Q5JPB2 1677 aa19.2■□□□□ 0.66
KDM2B-216ENST00000543025 CDKL5O76039 1030 aa19.2■□□□□ 0.66
KDM2B-216ENST00000543025 SLC39A14Q15043 492 aa19.2■□□□□ 0.66
KDM2B-216ENST00000543025 BCL11BQ9C0K0 894 aaPredicted RBP19.2■□□□□ 0.66
KDM2B-216ENST00000543025 IFNKQ9P0W0 207 aa19.2■□□□□ 0.66
KDM2B-216ENST00000543025 BIN1O00499 593 aa19.19■□□□□ 0.66
KDM2B-216ENST00000543025 METAP2P50579 478 aaKnown RBP eCLIP19.19■□□□□ 0.66
KDM2B-216ENST00000543025 TTF1Q15361 905 aaPredicted RBP19.19■□□□□ 0.66
KDM2B-216ENST00000543025 KIF18AQ8NI77 898 aa19.19■□□□□ 0.66
KDM2B-216ENST00000543025 SMARCC1Q92922 1105 aaPredicted RBP19.19■□□□□ 0.66
KDM2B-216ENST00000543025 TIGD1Q96MW7 591 aa19.19■□□□□ 0.66
KDM2B-216ENST00000543025 NBPF3Q9H094 633 aa19.19■□□□□ 0.66
KDM2B-216ENST00000543025 RIPOR2Q9Y4F9 1068 aa19.19■□□□□ 0.66
KDM2B-216ENST00000543025 NAA30Q147X3 362 aaPredicted RBP19.19■□□□□ 0.66
KDM2B-216ENST00000543025 LDHAL6AQ6ZMR3 332 aa19.19■□□□□ 0.66
KDM2B-216ENST00000543025 ZNF512BQ96KM6 892 aaPredicted RBP19.19■□□□□ 0.66
KDM2B-216ENST00000543025 ALG1Q9BT22 464 aa19.19■□□□□ 0.66
KDM2B-216ENST00000543025 MROH7-TTC4A0A0A0MT08 1334 aa19.18■□□□□ 0.66
KDM2B-216ENST00000543025 SLC9C2Q5TAH2 1124 aa19.18■□□□□ 0.66
KDM2B-216ENST00000543025 TMC6Q7Z403 805 aa19.18■□□□□ 0.66
KDM2B-216ENST00000543025 CDHR2Q9BYE9 1310 aa19.18■□□□□ 0.66
KDM2B-216ENST00000543025 IKBKBO14920 756 aa19.18■□□□□ 0.66
KDM2B-216ENST00000543025 WDHD1O75717 1129 aaPredicted RBP19.18■□□□□ 0.66
KDM2B-216ENST00000543025 TRIM37O94972 964 aa19.18■□□□□ 0.66
KDM2B-216ENST00000543025 NCAPHQ15003 741 aa19.18■□□□□ 0.66
KDM2B-216ENST00000543025 CPLX2Q6PUV4 134 aaKnown RBP19.18■□□□□ 0.66
KDM2B-216ENST00000543025 VPS37DQ86XT2 251 aa19.18■□□□□ 0.66
KDM2B-216ENST00000543025 JMYQ8N9B5 988 aa19.18■□□□□ 0.66
KDM2B-216ENST00000543025 TEX13AQ9BXU3 409 aaPredicted RBP19.18■□□□□ 0.66
KDM2B-216ENST00000543025 OGFRQ9NZT2 677 aa19.18■□□□□ 0.66
KDM2B-216ENST00000543025 COL5A3P25940 1745 aaPredicted RBP19.18■□□□□ 0.66
KDM2B-216ENST00000543025 SH2B2O14492 632 aaPredicted RBP19.17■□□□□ 0.66
KDM2B-216ENST00000543025 NRDCO43847 1150 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 PPP6R2O75170 966 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 ITGA6P23229 1130 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 SFPQP23246 707 aaKnown RBP eCLIP19.17■□□□□ 0.66
KDM2B-216ENST00000543025 MARCKSP29966 332 aaPredicted RBP19.17■□□□□ 0.66
KDM2B-216ENST00000543025 SYKP43405 635 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 TBC1D10CQ8IV04 446 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 DNAJC10Q8IXB1 793 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 GTPBP4Q9BZE4 634 aaKnown RBP19.17■□□□□ 0.66
KDM2B-216ENST00000543025 TNS1Q9HBL0 1735 aaKnown RBP19.17■□□□□ 0.66
KDM2B-216ENST00000543025 LOC102724428A0A0B4J2F2 783 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 KCNJ6P48051 423 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 SIK1P57059 783 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 UBE3CQ15386 1083 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 CYB5R4Q7L1T6 521 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 ZNF215Q9UL58 517 aaPredicted RBP19.17■□□□□ 0.66
KDM2B-216ENST00000543025 AKAP11Q9UKA4 1901 aa19.17■□□□□ 0.66
KDM2B-216ENST00000543025 ARMCX5Q6P1M9 558 aa19.16■□□□□ 0.66
KDM2B-216ENST00000543025 APOA5Q6Q788 366 aa19.16■□□□□ 0.66
KDM2B-216ENST00000543025 AIFM3Q96NN9 605 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms