RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 LEO1Q8WVC0 666 aaPredicted RBP14.73□□□□□ -0.05
TNC-212ENST00000542877 DCAF5Q96JK2 942 aa14.73□□□□□ -0.05
TNC-212ENST00000542877 GJC1P36383 396 aa14.73□□□□□ -0.05
TNC-212ENST00000542877 ZNF174Q15697 407 aa14.73□□□□□ -0.05
TNC-212ENST00000542877 SEL1L2Q5TEA6 688 aa14.73□□□□□ -0.05
TNC-212ENST00000542877 DZIP3Q86Y13 1208 aaKnown RBP14.73□□□□□ -0.05
TNC-212ENST00000542877 OTUD7AQ8TE49 926 aaPredicted RBP14.73□□□□□ -0.05
TNC-212ENST00000542877 PICALMQ13492 652 aa14.73□□□□□ -0.05
TNC-212ENST00000542877 LMBRD1Q9NUN5 540 aa14.73□□□□□ -0.05
TNC-212ENST00000542877 HOXB7P09629 217 aa14.73□□□□□ -0.05
TNC-212ENST00000542877 NLRP12P59046 1061 aa14.73□□□□□ -0.05
TNC-212ENST00000542877 UBLCP1Q8WVY7 318 aaPredicted RBP14.73□□□□□ -0.05
TNC-212ENST00000542877 UHRF1BP1Q6BDS2 1440 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 ARHGAP6O43182 974 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 ATP5DP30049 168 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 MSANTD4Q8NCY6 345 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 KCNK9Q9NPC2 374 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 SMIM23A6NLE4 172 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 RNMTO43148 476 aaKnown RBP14.72□□□□□ -0.05
TNC-212ENST00000542877 TNNI3KQ59H18 835 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 KRBA2Q6ZNG9 492 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 ZNF622Q969S3 477 aaKnown RBP eCLIP14.72□□□□□ -0.05
TNC-212ENST00000542877 NUP58Q9BVL2 599 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 FPGT-TNNI3KV9GXZ4 949 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 CNNM4Q6P4Q7 775 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 CCDC63Q8NA47 563 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 SERPINA10Q9UK55 444 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 A0A1B0GUL7 405 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 TRAF5O00463 557 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 MBD4O95243 580 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 C8orf74Q6P047 294 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 ANKRD2Q9GZV1 360 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 STIM2Q9P246 746 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 SYCP2Q9BX26 1530 aa14.72□□□□□ -0.05
TNC-212ENST00000542877 EYA2O00167 538 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 G2E3Q7L622 706 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 TMTC1Q8IUR5 882 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 PLIN2Q99541 437 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 CARD6Q9BX69 1037 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 VPS16Q9H269 839 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 HDAC9Q9UKV0 1011 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 ANGEL1Q9UNK9 670 aaKnown RBP14.71□□□□□ -0.05
TNC-212ENST00000542877 CCDC25Q86WR0 208 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 LRRC59Q96AG4 307 aaKnown RBP14.71□□□□□ -0.05
TNC-212ENST00000542877 SSX2IPQ9Y2D8 614 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 SYNRGQ9UMZ2 1314 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 LACTBP83111 547 aaPredicted RBP14.71□□□□□ -0.05
TNC-212ENST00000542877 RAPGEF1Q13905 1077 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 TCHPQ9BT92 498 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 NKIRAS1Q9NYS0 192 aa14.71□□□□□ -0.05
TNC-212ENST00000542877 PARP1P09874 1014 aaKnown RBP14.71□□□□□ -0.06
TNC-212ENST00000542877 ALDH3A1P30838 453 aa14.71□□□□□ -0.06
TNC-212ENST00000542877 PDE4DQ08499 809 aa14.71□□□□□ -0.06
TNC-212ENST00000542877 CEP128Q6ZU80 1094 aa14.71□□□□□ -0.06
TNC-212ENST00000542877 RSRC1Q96IZ7 334 aaKnown RBP14.71□□□□□ -0.06
TNC-212ENST00000542877 CEP83Q9Y592 693 aa14.71□□□□□ -0.06
TNC-212ENST00000542877 HELBQ8NG08 1087 aaPredicted RBP14.7□□□□□ -0.06
TNC-212ENST00000542877 ATP10BO94823 1461 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 KIAA1524Q8TCG1 905 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 RNF123Q5XPI4 1314 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 EPB41P11171 864 aaKnown RBP14.7□□□□□ -0.06
TNC-212ENST00000542877 GBP6Q6ZN66 633 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 B4E1Z4 1266 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 ZNF202O95125 648 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 ELF2Q15723 593 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 F8W031 263 aaPredicted RBP14.7□□□□□ -0.06
TNC-212ENST00000542877 LDHBP07195 334 aaKnown RBP14.7□□□□□ -0.06
TNC-212ENST00000542877 MAP3K9P80192 1104 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 DCAF17Q5H9S7 520 aaPredicted RBP14.7□□□□□ -0.06
TNC-212ENST00000542877 DAAM2Q86T65 1068 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 IFT20Q8IY31 132 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 APPBP2Q92624 585 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 IFT74Q96LB3 600 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 SWAP70Q9UH65 585 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 FRMD4BQ9Y2L6 1034 aa14.7□□□□□ -0.06
TNC-212ENST00000542877 ACTN4O43707 911 aaKnown RBP14.69□□□□□ -0.06
TNC-212ENST00000542877 IL2RBP14784 551 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 PAK1Q13153 545 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 GPR161Q8N6U8 529 aaKnown RBP14.69□□□□□ -0.06
TNC-212ENST00000542877 ZKSCAN3Q9BRR0 538 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 DENND2AQ9ULE3 1009 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.69□□□□□ -0.06
TNC-212ENST00000542877 LETM2Q2VYF4 491 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 TPTE2Q6XPS3 522 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 CSRNP2Q9H175 543 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 HOXC9P31274 260 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 METTL22Q9BUU2 404 aaPredicted RBP14.69□□□□□ -0.06
TNC-212ENST00000542877 NDUFAB1O14561 156 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 POLR2DO15514 142 aaKnown RBP14.69□□□□□ -0.06
TNC-212ENST00000542877 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 PPFIBP2Q8ND30 876 aa14.69□□□□□ -0.06
TNC-212ENST00000542877 SECISBP2LQ93073 1101 aaKnown RBP14.69□□□□□ -0.06
TNC-212ENST00000542877 SEC62Q99442 399 aaKnown RBP14.69□□□□□ -0.06
TNC-212ENST00000542877 GOLGA6CA6NDK9 693 aa14.68□□□□□ -0.06
TNC-212ENST00000542877 BRD1O95696 1058 aa14.68□□□□□ -0.06
TNC-212ENST00000542877 GOLGA6DP0CG33 693 aa14.68□□□□□ -0.06
TNC-212ENST00000542877 MRPL12P52815 198 aaKnown RBP14.68□□□□□ -0.06
TNC-212ENST00000542877 PPP2R5BQ15173 497 aa14.68□□□□□ -0.06
TNC-212ENST00000542877 INTS8Q75QN2 995 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms