RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 GOLGA8BA8MQT2 603 aa20.31■□□□□ 0.84
TMEM50B-210ENST00000542230 MINDY4BA8MYZ0 360 aa20.31■□□□□ 0.84
TMEM50B-210ENST00000542230 FDPSP14324 419 aaKnown RBP20.31■□□□□ 0.84
TMEM50B-210ENST00000542230 ZKSCAN3Q9BRR0 538 aa20.31■□□□□ 0.84
TMEM50B-210ENST00000542230 PANK2Q9BZ23 570 aa20.31■□□□□ 0.84
TMEM50B-210ENST00000542230 MYH13Q9UKX3 1938 aa20.31■□□□□ 0.84
TMEM50B-210ENST00000542230 GUCY1B3Q02153 619 aa20.31■□□□□ 0.84
TMEM50B-210ENST00000542230 ZSCAN23Q3MJ62 389 aa20.31■□□□□ 0.84
TMEM50B-210ENST00000542230 AATFQ9NY61 560 aaKnown RBP eCLIP20.31■□□□□ 0.84
TMEM50B-210ENST00000542230 UFL1O94874 794 aa20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 PDCP20941 246 aa20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 CCDC144CPQ8IYA2 1237 aa20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 RBM17Q96I25 401 aaKnown RBP20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 MYL10Q9BUA6 226 aa20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 SALL1Q9NSC2 1324 aa20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 AKNAD1Q5T1N1 836 aa20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 IGDCC4Q8TDY8 1250 aa20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 TOMM22Q9NS69 142 aa20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 GJB4Q9NTQ9 266 aa20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 TFIP11Q9UBB9 837 aaKnown RBP20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 POLLQ9UGP5 575 aa20.3■□□□□ 0.84
TMEM50B-210ENST00000542230 SH2B2O14492 632 aaPredicted RBP20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 SEMA3EO15041 775 aa20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 FAM184AQ8NB25 1140 aa20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 NACAP1Q9BZK3 213 aa20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 LEMD3Q9Y2U8 911 aa20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 ZMYM6O95789 1325 aa20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 BAZ2AQ9UIF9 1905 aaKnown RBP20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 GNAT2P19087 354 aa20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 OTUD7BQ6GQQ9 843 aa20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 LLPHQ9BRT6 129 aaKnown RBP20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 ANGEL1Q9UNK9 670 aaKnown RBP20.29■□□□□ 0.84
TMEM50B-210ENST00000542230 MMP10P09238 476 aa20.28■□□□□ 0.84
TMEM50B-210ENST00000542230 ADD1P35611 737 aaKnown RBP20.28■□□□□ 0.84
TMEM50B-210ENST00000542230 PPARAQ07869 468 aa20.28■□□□□ 0.84
TMEM50B-210ENST00000542230 SLC4A8Q2Y0W8 1093 aa20.28■□□□□ 0.84
TMEM50B-210ENST00000542230 MFSD6Q6ZSS7 791 aa20.28■□□□□ 0.84
TMEM50B-210ENST00000542230 HOXA10P31260 410 aaPredicted RBP20.28■□□□□ 0.84
TMEM50B-210ENST00000542230 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
TMEM50B-210ENST00000542230 TDRD7Q8NHU6 1098 aaKnown RBP20.28■□□□□ 0.84
TMEM50B-210ENST00000542230 LY9Q9HBG7 655 aa20.28■□□□□ 0.84
TMEM50B-210ENST00000542230 TAOK2Q9UL54 1235 aa20.28■□□□□ 0.84
TMEM50B-210ENST00000542230 KLRG2A4D1S0 409 aaPredicted RBP20.27■□□□□ 0.84
TMEM50B-210ENST00000542230 TMEM87AQ8NBN3 555 aa20.27■□□□□ 0.84
TMEM50B-210ENST00000542230 ANO8Q9HCE9 1232 aaPredicted RBP20.27■□□□□ 0.84
TMEM50B-210ENST00000542230 UTRNP46939 3433 aa20.27■□□□□ 0.83
TMEM50B-210ENST00000542230 H3BQV1 296 aa20.27■□□□□ 0.83
TMEM50B-210ENST00000542230 PRDM1O75626 825 aa20.27■□□□□ 0.83
TMEM50B-210ENST00000542230 IFFO2Q5TF58 517 aa20.27■□□□□ 0.83
TMEM50B-210ENST00000542230 CDC27P30260 824 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 RESTQ13127 1097 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 TMEM67Q5HYA8 995 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 TTC6Q86TZ1 520 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 MICU3Q86XE3 530 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 NLGN1Q8N2Q7 840 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 STAG1Q8WVM7 1258 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 ATP6V1DQ9Y5K8 247 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 ANKRD31Q8N7Z5 1873 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 UBE2Q2LH0YL09 131 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 APOA5Q6Q788 366 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 TBC1D16Q8TBP0 767 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 GGA1Q9UJY5 639 aa20.26■□□□□ 0.83
TMEM50B-210ENST00000542230 CHD4Q14839 1912 aa20.25■□□□□ 0.83
TMEM50B-210ENST00000542230 WDR19Q8NEZ3 1342 aa20.25■□□□□ 0.83
TMEM50B-210ENST00000542230 SYCE3A1L190 88 aa20.25■□□□□ 0.83
TMEM50B-210ENST00000542230 IFIT3O14879 490 aaKnown RBP20.25■□□□□ 0.83
TMEM50B-210ENST00000542230 BBOX1O75936 387 aa20.25■□□□□ 0.83
TMEM50B-210ENST00000542230 CYP2D6P10635 497 aa20.25■□□□□ 0.83
TMEM50B-210ENST00000542230 PDS5AQ29RF7 1337 aaKnown RBP20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 USP17L12C9JPN9 530 aa20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 USP17L21D6R901 530 aa20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 EN1Q05925 392 aaPredicted RBP20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 EZH2Q15910 746 aaKnown RBP20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 AIFM3Q96NN9 605 aa20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 FTOQ9C0B1 505 aaKnown RBP eCLIP20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 GRPEL1Q9HAV7 217 aa20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 CD209Q9NNX6 404 aa20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 DZIP1Q86YF9 867 aaKnown RBP20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 CRAMP1Q96RY5 1269 aa20.24■□□□□ 0.83
TMEM50B-210ENST00000542230 C6orf229H3BNL8 230 aa20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 SRGNP10124 158 aa20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 NFXL1Q6ZNB6 911 aa20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 ZNF804AQ7Z570 1209 aa20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 FAM217BQ9NTX9 383 aaPredicted RBP20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 RIMBP2O15034 1052 aa20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 MBD3O95983 291 aa20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 HMGN5P82970 282 aaKnown RBP20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 PHKBQ93100 1093 aa20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 BRIP1Q9BX63 1249 aa20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 DCP1AQ9NPI6 582 aaPredicted RBP20.23■□□□□ 0.83
TMEM50B-210ENST00000542230 PPEF1O14829 653 aaPredicted RBP20.22■□□□□ 0.83
TMEM50B-210ENST00000542230 LDHBP07195 334 aaKnown RBP20.22■□□□□ 0.83
TMEM50B-210ENST00000542230 CEBPZQ03701 1054 aaKnown RBP20.22■□□□□ 0.83
TMEM50B-210ENST00000542230 PDGFDQ9GZP0 370 aaPredicted RBP20.22■□□□□ 0.83
TMEM50B-210ENST00000542230 METAP2P50579 478 aaKnown RBP eCLIP20.22■□□□□ 0.83
TMEM50B-210ENST00000542230 ILDR1Q86SU0 546 aaPredicted RBP20.22■□□□□ 0.83
TMEM50B-210ENST00000542230 TMEM87BQ96K49 555 aa20.22■□□□□ 0.83
TMEM50B-210ENST00000542230 ORC3Q9UBD5 711 aaPredicted RBP20.22■□□□□ 0.83
TMEM50B-210ENST00000542230 TIAM2Q8IVF5 1701 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms