RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 TMEM87AQ8NBN3 555 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 TTC14Q96N46 770 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 ASB16Q96NS5 453 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 CCDC85AQ96PX6 553 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-214ENST00000541600 ARHGAP9Q9BRR9 750 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 LSG1Q9H089 658 aaKnown RBP8.05□□□□□ -1.12
EPHA4-214ENST00000541600 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-214ENST00000541600 DOLKQ9UPQ8 538 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 THRAP3Q9Y2W1 955 aaKnown RBP8.05□□□□□ -1.12
EPHA4-214ENST00000541600 DDX49Q9Y6V7 483 aaKnown RBP8.05□□□□□ -1.12
EPHA4-214ENST00000541600 ERBB3P21860 1342 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 ERBB4Q15303 1308 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 PKD1L3Q7Z443 1732 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 C21orf2O43822 256 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 NR1I2O75469 434 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 DXOO77932 396 aaKnown RBP8.04□□□□□ -1.12
EPHA4-214ENST00000541600 EIF2S2P20042 333 aaKnown RBP8.04□□□□□ -1.12
EPHA4-214ENST00000541600 GTF2IP78347 998 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 CCDC173Q0VFZ6 552 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 COL19A1Q14993 1142 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 ECM1Q16610 540 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 MSS51Q4VC12 460 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 CCDC102BQ68D86 513 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 MPRIPQ6WCQ1 1025 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 CLASRPQ8N2M8 674 aaKnown RBP8.04□□□□□ -1.12
EPHA4-214ENST00000541600 EVI5LQ96CN4 794 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 NUDT12Q9BQG2 462 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 ANO2Q9NQ90 1003 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 ECHDC1Q9NTX5 307 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 DCTN4Q9UJW0 460 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 CPDO75976 1380 aa8.04□□□□□ -1.12
EPHA4-214ENST00000541600 RGPD5Q99666 1765 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 RFX7Q2KHR2 1363 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 GRM8O00222 908 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 MAPK1P28482 360 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 TAGLNQ01995 201 aaKnown RBP8.03□□□□□ -1.12
EPHA4-214ENST00000541600 LRP10Q7Z4F1 713 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 ZGPATQ8N5A5 531 aaKnown RBP8.03□□□□□ -1.12
EPHA4-214ENST00000541600 RILPL2Q969X0 211 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 GPATCH3Q96I76 525 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 KAZALD1Q96I82 304 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 PKNOX2Q96KN3 472 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 ZSCAN31Q96LW9 406 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-214ENST00000541600 DRC1Q96MC2 740 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 SLC52A2Q9HAB3 445 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 PALD1Q9ULE6 856 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 SPG7Q9UQ90 795 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 MAP3K2Q9Y2U5 619 aa8.03□□□□□ -1.12
EPHA4-214ENST00000541600 WDR33Q9C0J8 1336 aaKnown RBP8.03□□□□□ -1.12
EPHA4-214ENST00000541600 COL5A2P05997 1499 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 SFI1A8K8P3 1242 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 RECKO95980 971 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 PHKG2P15735 406 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 RGS19P49795 217 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 DDB1Q16531 1140 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 RABL6Q3YEC7 729 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 OXLD1Q5BKU9 147 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 VARS2Q5ST30 1063 aaKnown RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 VPS53Q5VIR6 699 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 ZNF790Q6PG37 636 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 SH3BP5LQ7L8J4 393 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 ZBTB33Q86T24 672 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 DZIP3Q86Y13 1208 aaKnown RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 ZSCAN29Q8IWY8 852 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 FAM177A1Q8N128 213 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 TPCN2Q8NHX9 752 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 SLC16A10Q8TF71 515 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 GTF3C2Q8WUA4 911 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 SREK1Q8WXA9 508 aaKnown RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 PDLIM2Q96JY6 352 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 METTL22Q9BUU2 404 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 PANK2Q9BZ23 570 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 IL1RAPL2Q9NP60 686 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 COPRSQ9NQ92 184 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 RRAGDQ9NQL2 400 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 C9orf78Q9NZ63 289 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 LIMCH1Q9UPQ0 1083 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 PCDHGA11Q9Y5H2 935 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 SNX14Q9Y5W7 946 aa8.02□□□□□ -1.13
EPHA4-214ENST00000541600 KDM6AO15550 1401 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-214ENST00000541600 FOXN1O15353 648 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 TATP17735 454 aaPredicted RBP8.01□□□□□ -1.13
EPHA4-214ENST00000541600 POLD1P28340 1107 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 MMP16P51512 607 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 FKBP4Q02790 459 aaKnown RBP eCLIP8.01□□□□□ -1.13
EPHA4-214ENST00000541600 NECTIN1Q15223 517 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 ZSCAN23Q3MJ62 389 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 MCTP1Q6DN14 999 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 KIAA1211Q6ZU35 1233 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 IFNL2Q8IZJ0 200 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 GPT2Q8TD30 523 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 RAPGEF4Q8WZA2 1011 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 MAP4K1Q92918 833 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 ACSBG1Q96GR2 724 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 DCAF5Q96JK2 942 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 SH2B1Q9NRF2 756 aaPredicted RBP8.01□□□□□ -1.13
EPHA4-214ENST00000541600 PCDHB3Q9Y5E6 796 aa8.01□□□□□ -1.13
EPHA4-214ENST00000541600 NEURL1BA8MQ27 555 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 ESPNB1AK53 854 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms