RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 EIF1AXP47813 144 aaKnown RBP7.26□□□□□ -1.25
PRKDC-209ENST00000540819 HSP90AB4PQ58FF6 505 aa7.26□□□□□ -1.25
PRKDC-209ENST00000540819 Q6ZS46 218 aa7.26□□□□□ -1.25
PRKDC-209ENST00000540819 ACAD11Q709F0 780 aa7.26□□□□□ -1.25
PRKDC-209ENST00000540819 NCAPG2Q86XI2 1143 aa7.26□□□□□ -1.25
PRKDC-209ENST00000540819 GALNT11Q8NCW6 608 aa7.26□□□□□ -1.25
PRKDC-209ENST00000540819 GPR152Q8TDT2 470 aa7.26□□□□□ -1.25
PRKDC-209ENST00000540819 PMM1Q92871 262 aa7.26□□□□□ -1.25
PRKDC-209ENST00000540819 CCDC136Q96JN2 1154 aa7.26□□□□□ -1.25
PRKDC-209ENST00000540819 UBL7Q96S82 380 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-209ENST00000540819 SETDB2Q96T68 719 aa7.26□□□□□ -1.25
PRKDC-209ENST00000540819 SLKQ9H2G2 1235 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-209ENST00000540819 TYW1Q9NV66 732 aaKnown RBP7.26□□□□□ -1.25
PRKDC-209ENST00000540819 STIM2Q9P246 746 aa7.26□□□□□ -1.25
PRKDC-209ENST00000540819 COBLO75128 1261 aa7.25□□□□□ -1.25
PRKDC-209ENST00000540819 ATP11AP98196 1134 aa7.25□□□□□ -1.25
PRKDC-209ENST00000540819 DUOXA2Q1HG44 320 aa7.25□□□□□ -1.25
PRKDC-209ENST00000540819 TXNDC11Q6PKC3 985 aa7.25□□□□□ -1.25
PRKDC-209ENST00000540819 CCDC146Q8IYE0 955 aa7.25□□□□□ -1.25
PRKDC-209ENST00000540819 ABTB2Q8N961 1025 aa7.25□□□□□ -1.25
PRKDC-209ENST00000540819 KLHL23Q8NBE8 558 aa7.25□□□□□ -1.25
PRKDC-209ENST00000540819 STAG1Q8WVM7 1258 aa7.25□□□□□ -1.25
PRKDC-209ENST00000540819 RNPC3Q96LT9 517 aaKnown RBP7.25□□□□□ -1.25
PRKDC-209ENST00000540819 PCGF6Q9BYE7 350 aa7.25□□□□□ -1.25
PRKDC-209ENST00000540819 GEMIN8Q9NWZ8 242 aaKnown RBP7.25□□□□□ -1.25
PRKDC-209ENST00000540819 ABI2Q9NYB9 513 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-209ENST00000540819 COL13A1Q5TAT6 717 aaPredicted RBP7.24□□□□□ -1.25
PRKDC-209ENST00000540819 MCTP1Q6DN14 999 aa7.24□□□□□ -1.25
PRKDC-209ENST00000540819 UTP4Q969X6 686 aaKnown RBP7.24□□□□□ -1.25
PRKDC-209ENST00000540819 PBX4Q9BYU1 374 aa7.24□□□□□ -1.25
PRKDC-209ENST00000540819 NIF3L1Q9GZT8 377 aa7.24□□□□□ -1.25
PRKDC-209ENST00000540819 RASSF4Q9H2L5 321 aa7.24□□□□□ -1.25
PRKDC-209ENST00000540819 SIRPGQ9P1W8 387 aa7.24□□□□□ -1.25
PRKDC-209ENST00000540819 GABBR1Q9UBS5 961 aa7.24□□□□□ -1.25
PRKDC-209ENST00000540819 G3BP2Q9UN86 482 aaKnown RBP7.24□□□□□ -1.25
PRKDC-209ENST00000540819 TNFRSF10BO14763 440 aa7.23□□□□□ -1.25
PRKDC-209ENST00000540819 FSCN2O14926 492 aa7.23□□□□□ -1.25
PRKDC-209ENST00000540819 CREB3O43889 395 aa7.23□□□□□ -1.25
PRKDC-209ENST00000540819 PTPRAP18433 802 aa7.23□□□□□ -1.25
PRKDC-209ENST00000540819 TBX4P57082 545 aa7.23□□□□□ -1.25
PRKDC-209ENST00000540819 CABP4P57796 275 aa7.23□□□□□ -1.25
PRKDC-209ENST00000540819 RALBP1Q15311 655 aa7.23□□□□□ -1.25
PRKDC-209ENST00000540819 FAM26DQ5JW98 314 aa7.23□□□□□ -1.25
PRKDC-209ENST00000540819 APBB1IPQ7Z5R6 666 aaPredicted RBP7.23□□□□□ -1.25
PRKDC-209ENST00000540819 GPRASP2Q96D09 838 aa7.23□□□□□ -1.25
PRKDC-209ENST00000540819 GGT7Q9UJ14 662 aa7.23□□□□□ -1.25
PRKDC-209ENST00000540819 SART1O43290 800 aaKnown RBP7.22□□□□□ -1.25
PRKDC-209ENST00000540819 PAX4O43316 350 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 PDGFRBP09619 1106 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 GRIK1P39086 918 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 CD97P48960 835 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 AMPD3Q01432 767 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 PAK2Q13177 524 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 UVSSAQ2YD98 709 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 TTC16Q8NEE8 873 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 SRPK1Q96SB4 655 aaKnown RBP7.22□□□□□ -1.25
PRKDC-209ENST00000540819 CARD10Q9BWT7 1032 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 SEC31BQ9NQW1 1179 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 SH2B1Q9NRF2 756 aaPredicted RBP7.22□□□□□ -1.25
PRKDC-209ENST00000540819 SPG7Q9UQ90 795 aa7.22□□□□□ -1.25
PRKDC-209ENST00000540819 WISP1O95388 367 aa7.21□□□□□ -1.26
PRKDC-209ENST00000540819 RPLP1P05386 114 aaKnown RBP7.21□□□□□ -1.26
PRKDC-209ENST00000540819 EIF4BP23588 611 aaKnown RBP7.21□□□□□ -1.26
PRKDC-209ENST00000540819 MZF1P28698 734 aaPredicted RBP7.21□□□□□ -1.26
PRKDC-209ENST00000540819 IRAK1P51617 712 aa7.21□□□□□ -1.26
PRKDC-209ENST00000540819 IRX6P78412 446 aaPredicted RBP7.21□□□□□ -1.26
PRKDC-209ENST00000540819 PDE12Q6L8Q7 609 aaKnown RBP7.21□□□□□ -1.26
PRKDC-209ENST00000540819 INTS5Q6P9B9 1019 aaKnown RBP7.21□□□□□ -1.26
PRKDC-209ENST00000540819 KRTAP1-3Q8IUG1 177 aa7.21□□□□□ -1.26
PRKDC-209ENST00000540819 FMNL3Q8IVF7 1028 aa7.21□□□□□ -1.26
PRKDC-209ENST00000540819 RASGRP4Q8TDF6 673 aa7.21□□□□□ -1.26
PRKDC-209ENST00000540819 SEC16BQ96JE7 1060 aa7.21□□□□□ -1.26
PRKDC-209ENST00000540819 ELP3Q9H9T3 547 aa7.21□□□□□ -1.26
PRKDC-209ENST00000540819 KCNK4Q9NYG8 393 aa7.21□□□□□ -1.26
PRKDC-209ENST00000540819 COL17A1Q9UMD9 1497 aaPredicted RBP7.21□□□□□ -1.26
PRKDC-209ENST00000540819 ZBTB39O15060 712 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 PRC1O43663 620 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 KIF4AO95239 1232 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 TGFB1P01137 390 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 CYP2E1P05181 493 aaPredicted RBP7.2□□□□□ -1.26
PRKDC-209ENST00000540819 SSBP05455 408 aaKnown RBP eCLIP7.2□□□□□ -1.26
PRKDC-209ENST00000540819 PCSK2P16519 638 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 USP5P45974 858 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 NFIAQ12857 509 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 ARSHQ5FYA8 562 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 LRP10Q7Z4F1 713 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 ZNF438Q7Z4V0 828 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 TEX2Q8IWB9 1127 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 GJD3Q8N144 294 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 ARMC10Q8N2F6 343 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 CEP120Q8N960 986 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 PRPF38AQ8NAV1 312 aaKnown RBP7.2□□□□□ -1.26
PRKDC-209ENST00000540819 JDP2Q8WYK2 163 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 POP1Q99575 1024 aaKnown RBP7.2□□□□□ -1.26
PRKDC-209ENST00000540819 USP31Q70CQ4 1352 aa7.2□□□□□ -1.26
PRKDC-209ENST00000540819 CDC45O75419 566 aa7.19□□□□□ -1.26
PRKDC-209ENST00000540819 TXKP42681 527 aa7.19□□□□□ -1.26
PRKDC-209ENST00000540819 SPTY2D1Q68D10 685 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-209ENST00000540819 RNF43Q68DV7 783 aa7.19□□□□□ -1.26
PRKDC-209ENST00000540819 KIAA1211Q6ZU35 1233 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms