RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 BAG3O95817 575 aa18.77■□□□□ 0.6
DDB1-218ENST00000540784 BTDP43251 543 aa18.77■□□□□ 0.6
DDB1-218ENST00000540784 ZSCAN25Q6NSZ9 544 aa18.77■□□□□ 0.6
DDB1-218ENST00000540784 CDC42EP5Q6NZY7 148 aa18.77■□□□□ 0.6
DDB1-218ENST00000540784 TMOD2Q9NZR1 351 aa18.77■□□□□ 0.6
DDB1-218ENST00000540784 PDE6AP16499 860 aa18.76■□□□□ 0.59
DDB1-218ENST00000540784 LRRFIP1Q32MZ4 808 aaKnown RBP18.76■□□□□ 0.59
DDB1-218ENST00000540784 KBTBD3Q8NAB2 608 aa18.76■□□□□ 0.59
DDB1-218ENST00000540784 SCAF8Q9UPN6 1271 aaKnown RBP18.76■□□□□ 0.59
DDB1-218ENST00000540784 TCP10L2B9ZVM9 353 aa18.75■□□□□ 0.59
DDB1-218ENST00000540784 ADM5C9JUS6 153 aa18.75■□□□□ 0.59
DDB1-218ENST00000540784 TNNI2P48788 182 aa18.75■□□□□ 0.59
DDB1-218ENST00000540784 PPP4CP60510 307 aa18.75■□□□□ 0.59
DDB1-218ENST00000540784 C1QTNF8P60827 252 aa18.75■□□□□ 0.59
DDB1-218ENST00000540784 EVI5LQ96CN4 794 aa18.75■□□□□ 0.59
DDB1-218ENST00000540784 DEFB129Q9H1M3 183 aa18.75■□□□□ 0.59
DDB1-218ENST00000540784 ZNF532Q9HCE3 1301 aa18.74■□□□□ 0.59
DDB1-218ENST00000540784 TRIM6-TRIM34B2RNG4 842 aa18.74■□□□□ 0.59
DDB1-218ENST00000540784 TRAF5O00463 557 aa18.74■□□□□ 0.59
DDB1-218ENST00000540784 ADD2P35612 726 aa18.74■□□□□ 0.59
DDB1-218ENST00000540784 CACNB3P54284 484 aa18.74■□□□□ 0.59
DDB1-218ENST00000540784 TNFAIP1Q13829 316 aa18.74■□□□□ 0.59
DDB1-218ENST00000540784 FKBP1CQ5VVH2 108 aa18.74■□□□□ 0.59
DDB1-218ENST00000540784 ADGRA1Q86SQ6 560 aa18.74■□□□□ 0.59
DDB1-218ENST00000540784 AATFQ9NY61 560 aaKnown RBP eCLIP18.74■□□□□ 0.59
DDB1-218ENST00000540784 ADAMTSL1Q8N6G6 1762 aa18.73■□□□□ 0.59
DDB1-218ENST00000540784 TCRBV5S4A2TA0A5A2 114 aa18.73■□□□□ 0.59
DDB1-218ENST00000540784 RNF113AO15541 343 aaKnown RBP18.73■□□□□ 0.59
DDB1-218ENST00000540784 ZFYP08048 801 aaPredicted RBP18.73■□□□□ 0.59
DDB1-218ENST00000540784 PLCG2P16885 1265 aa18.73■□□□□ 0.59
DDB1-218ENST00000540784 RASA3Q14644 834 aa18.73■□□□□ 0.59
DDB1-218ENST00000540784 UBE3CQ15386 1083 aa18.73■□□□□ 0.59
DDB1-218ENST00000540784 DLK2Q6UY11 383 aa18.73■□□□□ 0.59
DDB1-218ENST00000540784 RILPL2Q969X0 211 aa18.73■□□□□ 0.59
DDB1-218ENST00000540784 FSD1Q9BTV5 496 aa18.73■□□□□ 0.59
DDB1-218ENST00000540784 MAGEB6P1A0A0J9YX57 407 aa18.72■□□□□ 0.59
DDB1-218ENST00000540784 RHBDL3P58872 404 aa18.72■□□□□ 0.59
DDB1-218ENST00000540784 PRAMEF18Q5VWM3 479 aa18.72■□□□□ 0.59
DDB1-218ENST00000540784 CERS3Q8IU89 383 aa18.72■□□□□ 0.59
DDB1-218ENST00000540784 MIGA1Q8NAN2 632 aa18.72■□□□□ 0.59
DDB1-218ENST00000540784 PPP2R3BQ9Y5P8 575 aa18.72■□□□□ 0.59
DDB1-218ENST00000540784 DYNLL1P63167 89 aaKnown RBP18.71■□□□□ 0.59
DDB1-218ENST00000540784 FMR1Q06787 632 aaKnown RBP eCLIP18.71■□□□□ 0.596e-8■■■■■ 31.5
DDB1-218ENST00000540784 SLFNL1Q499Z3 407 aa18.71■□□□□ 0.59
DDB1-218ENST00000540784 FAM83AQ86UY5 434 aa18.71■□□□□ 0.59
DDB1-218ENST00000540784 TEX11Q8IYF3 940 aa18.71■□□□□ 0.59
DDB1-218ENST00000540784 SH3RF3Q8TEJ3 882 aaPredicted RBP18.71■□□□□ 0.59
DDB1-218ENST00000540784 CDCA5Q96FF9 252 aa18.71■□□□□ 0.59
DDB1-218ENST00000540784 IDI2Q9BXS1 227 aa18.71■□□□□ 0.59
DDB1-218ENST00000540784 PASKQ96RG2 1323 aa18.71■□□□□ 0.59
DDB1-218ENST00000540784 TCP10Q12799 353 aa18.7■□□□□ 0.58
DDB1-218ENST00000540784 NFIAQ12857 509 aa18.7■□□□□ 0.58
DDB1-218ENST00000540784 SUPT20HL1Q3ZLR7 823 aa18.7■□□□□ 0.58
DDB1-218ENST00000540784 TTC22Q5TAA0 569 aa18.7■□□□□ 0.58
DDB1-218ENST00000540784 TICAM2Q86XR7 235 aa18.7■□□□□ 0.58
DDB1-218ENST00000540784 FAM151AQ8WW52 585 aa18.7■□□□□ 0.58
DDB1-218ENST00000540784 ZNF408Q9H9D4 720 aa18.7■□□□□ 0.58
DDB1-218ENST00000540784 MYH2Q9UKX2 1941 aa18.69■□□□□ 0.58
DDB1-218ENST00000540784 ENTPD3O75355 529 aa18.69■□□□□ 0.58
DDB1-218ENST00000540784 WDHD1O75717 1129 aaPredicted RBP18.69■□□□□ 0.58
DDB1-218ENST00000540784 CELF2O95319 508 aaKnown RBP18.69■□□□□ 0.58
DDB1-218ENST00000540784 CHGBP05060 677 aa18.69■□□□□ 0.58
DDB1-218ENST00000540784 FAM198AQ9UFP1 575 aa18.69■□□□□ 0.58
DDB1-218ENST00000540784 NF2P35240 595 aa18.68■□□□□ 0.58
DDB1-218ENST00000540784 RGS3P49796 1198 aa18.68■□□□□ 0.58
DDB1-218ENST00000540784 APLP1P51693 650 aa18.68■□□□□ 0.58
DDB1-218ENST00000540784 PICALMQ13492 652 aa18.68■□□□□ 0.58
DDB1-218ENST00000540784 CST9Q5W186 159 aa18.68■□□□□ 0.58
DDB1-218ENST00000540784 TGFBRAP1Q8WUH2 860 aa18.68■□□□□ 0.58
DDB1-218ENST00000540784 APPBP2Q92624 585 aa18.68■□□□□ 0.58
DDB1-218ENST00000540784 RIOK1Q9BRS2 568 aaKnown RBP18.68■□□□□ 0.58
DDB1-218ENST00000540784 TMEM39BQ9GZU3 492 aa18.68■□□□□ 0.58
DDB1-218ENST00000540784 TMEM88BA6NKF7 163 aa18.67■□□□□ 0.58
DDB1-218ENST00000540784 NPM3O75607 178 aaKnown RBP18.67■□□□□ 0.58
DDB1-218ENST00000540784 USP5P45974 858 aa18.67■□□□□ 0.58
DDB1-218ENST00000540784 NBPF12Q5TAG4 269 aaPredicted RBP18.67■□□□□ 0.58
DDB1-218ENST00000540784 SKAP1Q86WV1 359 aa18.67■□□□□ 0.58
DDB1-218ENST00000540784 ZFPM1Q8IX07 1006 aa18.67■□□□□ 0.58
DDB1-218ENST00000540784 AIDAQ96BJ3 306 aa18.67■□□□□ 0.58
DDB1-218ENST00000540784 CRNKL1Q9BZJ0 848 aaKnown RBP18.67■□□□□ 0.58
DDB1-218ENST00000540784 PUS7LQ9H0K6 701 aaKnown RBP18.67■□□□□ 0.58
DDB1-218ENST00000540784 POLR2AP24928 1970 aaKnown RBP18.67■□□□□ 0.58
DDB1-218ENST00000540784 CNTNAP1P78357 1384 aa18.67■□□□□ 0.58
DDB1-218ENST00000540784 MBD4O95243 580 aa18.66■□□□□ 0.58
DDB1-218ENST00000540784 SDSP20132 328 aa18.66■□□□□ 0.58
DDB1-218ENST00000540784 ZSCAN29Q8IWY8 852 aaPredicted RBP18.66■□□□□ 0.58
DDB1-218ENST00000540784 C2orf69Q8N8R5 385 aa18.66■□□□□ 0.58
DDB1-218ENST00000540784 OSBP2Q969R2 916 aa18.66■□□□□ 0.58
DDB1-218ENST00000540784 TEPSINQ96N21 525 aa18.66■□□□□ 0.58
DDB1-218ENST00000540784 ARMT1Q9H993 441 aa18.66■□□□□ 0.58
DDB1-218ENST00000540784 DDX4Q9NQI0 724 aaKnown RBP18.66■□□□□ 0.58
DDB1-218ENST00000540784 MYO5AQ9Y4I1 1855 aaKnown RBP18.66■□□□□ 0.58
DDB1-218ENST00000540784 GSPT1P15170 499 aaKnown RBP18.65■□□□□ 0.58
DDB1-218ENST00000540784 HSPA6P17066 643 aa18.65■□□□□ 0.58
DDB1-218ENST00000540784 ZMYM1Q5SVZ6 1142 aa18.65■□□□□ 0.58
DDB1-218ENST00000540784 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
DDB1-218ENST00000540784 LCORLQ8N3X6 602 aa18.65■□□□□ 0.58
DDB1-218ENST00000540784 HOOK2Q96ED9 719 aa18.65■□□□□ 0.58
DDB1-218ENST00000540784 HIP1O00291 1037 aa18.64■□□□□ 0.57
DDB1-218ENST00000540784 TTLL12Q14166 644 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms