RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 GOLGA8BA8MQT2 603 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 PLSCR1O15162 318 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 BBOX1O75936 387 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 SLC3A2P08195 630 aaKnown RBP11.92□□□□□ -0.5
SPARC-209ENST00000539687 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 ATP2B4P23634 1241 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 GYG1P46976 350 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 GSTO1P78417 241 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 R3HDM1Q15032 1099 aaKnown RBP11.92□□□□□ -0.5
SPARC-209ENST00000539687 PPP2R5BQ15173 497 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 CRY2Q49AN0 593 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 FAM182BQ5T319 152 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 CCDC183Q5T5S1 534 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 ZNF804AQ7Z570 1209 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 SGMS1Q86VZ5 419 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 ZNF396Q96N95 335 aaPredicted RBP11.92□□□□□ -0.5
SPARC-209ENST00000539687 ABCF2Q9UG63 623 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 ANAPC4Q9UJX5 808 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 NAP1L2Q9ULW6 460 aaPredicted RBP11.92□□□□□ -0.5
SPARC-209ENST00000539687 CCDC196A0A1B0GTZ2 297 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 SH2B2O14492 632 aaPredicted RBP11.91□□□□□ -0.5
SPARC-209ENST00000539687 SERPINB2P05120 415 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 GYS1P13807 737 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 TM4SF1P30408 202 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 PRR5LQ6MZQ0 368 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 LRSAM1Q6UWE0 723 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 CDC37L1Q7L3B6 337 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 WASF1Q92558 559 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 ARMT1Q9H993 441 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 LRRC4BQ9NT99 713 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 CNPY2Q9Y2B0 182 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 NID2Q14112 1375 aa11.91□□□□□ -0.5
SPARC-209ENST00000539687 GOLGA6L4A6NEF3 574 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 GSG1L2A8MUP6 293 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 FIBPO43427 364 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 TRIM37O94972 964 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 LDHCP07864 332 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 HOXA10P31260 410 aaPredicted RBP11.9□□□□□ -0.5
SPARC-209ENST00000539687 METAP2P50579 478 aaKnown RBP eCLIP11.9□□□□□ -0.5
SPARC-209ENST00000539687 DNM1Q05193 864 aaKnown RBP11.9□□□□□ -0.5
SPARC-209ENST00000539687 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
SPARC-209ENST00000539687 TXNRD1Q16881 649 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 TBC1D10CQ8IV04 446 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 LCORLQ8N3X6 602 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 ESR2Q92731 530 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 CRAMP1Q96RY5 1269 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 NOL10Q9BSC4 688 aaKnown RBP11.9□□□□□ -0.5
SPARC-209ENST00000539687 CRNKL1Q9BZJ0 848 aaKnown RBP11.9□□□□□ -0.5
SPARC-209ENST00000539687 ATP8A2Q9NTI2 1148 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 ANKIB1Q9P2G1 1089 aa11.9□□□□□ -0.5
SPARC-209ENST00000539687 CCDC69A6NI79 296 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 ZBTB43O43298 467 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 JAK2O60674 1132 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 XRCC6P12956 609 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPARC-209ENST00000539687 ANTXR2P58335 489 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 PPARAQ07869 468 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 RESTQ13127 1097 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 NFXL1Q6ZNB6 911 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 DZIP1Q86YF9 867 aaKnown RBP11.89□□□□□ -0.51
SPARC-209ENST00000539687 SLF2Q8IX21 1173 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 AMOTL1Q8IY63 956 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 SPATA32Q96LK8 384 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 EPB41L4AQ9HCS5 686 aaPredicted RBP11.89□□□□□ -0.51
SPARC-209ENST00000539687 ARPP21Q9UBL0 812 aaPredicted RBP11.89□□□□□ -0.51
SPARC-209ENST00000539687 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
SPARC-209ENST00000539687 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
SPARC-209ENST00000539687 STK36Q9NRP7 1315 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 RGPD3A6NKT7 1758 aaPredicted RBP11.88□□□□□ -0.51
SPARC-209ENST00000539687 RGPD4Q7Z3J3 1758 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 KLRG2A4D1S0 409 aaPredicted RBP11.88□□□□□ -0.51
SPARC-209ENST00000539687 B4E1Z4 1266 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 SNAP23O00161 211 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 BAG3O95817 575 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
SPARC-209ENST00000539687 CCT2P78371 535 aaKnown RBP11.88□□□□□ -0.51
SPARC-209ENST00000539687 CCDC173Q0VFZ6 552 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 TMEM67Q5HYA8 995 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 BRAPQ7Z569 592 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
SPARC-209ENST00000539687 NSUN4Q96CB9 384 aaKnown RBP11.88□□□□□ -0.51
SPARC-209ENST00000539687 DDX11Q96FC9 970 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 RIOK1Q9BRS2 568 aaKnown RBP11.88□□□□□ -0.51
SPARC-209ENST00000539687 UBAC1Q9BSL1 405 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 TMX4Q9H1E5 349 aaPredicted RBP11.88□□□□□ -0.51
SPARC-209ENST00000539687 PODXL2Q9NZ53 605 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 TMEM63CQ9P1W3 806 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 TNS1Q9HBL0 1735 aaKnown RBP11.88□□□□□ -0.51
SPARC-209ENST00000539687 COL1A1P02452 1464 aaPredicted RBP11.88□□□□□ -0.51
SPARC-209ENST00000539687 MYH13Q9UKX3 1938 aa11.88□□□□□ -0.51
SPARC-209ENST00000539687 IFIT3O14879 490 aaKnown RBP11.87□□□□□ -0.51
SPARC-209ENST00000539687 CTDNEP1O95476 244 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 CALM1P0DP23 149 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 CALM2P0DP24 149 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 CALM3P0DP25 149 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms