RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 TTF1Q15361 905 aaPredicted RBP15.77■□□□□ 0.12
CCDC42-202ENST00000539522 SLC9C2Q5TAH2 1124 aa15.77■□□□□ 0.12
CCDC42-202ENST00000539522 NAA16Q6N069 864 aaPredicted RBP15.77■□□□□ 0.12
CCDC42-202ENST00000539522 LDHDQ86WU2 507 aa15.77■□□□□ 0.12
CCDC42-202ENST00000539522 CDAN1Q8IWY9 1227 aa15.77■□□□□ 0.12
CCDC42-202ENST00000539522 RIOK1Q9BRS2 568 aaKnown RBP15.77■□□□□ 0.12
CCDC42-202ENST00000539522 ZNF70Q9UC06 446 aaPredicted RBP15.77■□□□□ 0.12
CCDC42-202ENST00000539522 ZBTB47Q9UFB7 747 aaPredicted RBP15.77■□□□□ 0.12
CCDC42-202ENST00000539522 SSC5DA1L4H1 1573 aa15.76■□□□□ 0.11
CCDC42-202ENST00000539522 ADM5C9JUS6 153 aa15.76■□□□□ 0.11
CCDC42-202ENST00000539522 CYP7A1P22680 504 aa15.76■□□□□ 0.11
CCDC42-202ENST00000539522 BTDP43251 543 aa15.76■□□□□ 0.11
CCDC42-202ENST00000539522 ZFPM1Q8IX07 1006 aa15.76■□□□□ 0.11
CCDC42-202ENST00000539522 ZC3H15Q8WU90 426 aaKnown RBP15.76■□□□□ 0.11
CCDC42-202ENST00000539522 DDX4Q9NQI0 724 aaKnown RBP15.76■□□□□ 0.11
CCDC42-202ENST00000539522 PAPPA2Q9BXP8 1791 aa15.76■□□□□ 0.11
CCDC42-202ENST00000539522 TRAF5O00463 557 aa15.75■□□□□ 0.11
CCDC42-202ENST00000539522 WDHD1O75717 1129 aaPredicted RBP15.75■□□□□ 0.11
CCDC42-202ENST00000539522 SDSP20132 328 aa15.75■□□□□ 0.11
CCDC42-202ENST00000539522 RBM5P52756 815 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC42-202ENST00000539522 PPP4CP60510 307 aa15.75■□□□□ 0.11
CCDC42-202ENST00000539522 MAP3K12Q12852 859 aa15.75■□□□□ 0.11
CCDC42-202ENST00000539522 MIGA1Q8NAN2 632 aa15.75■□□□□ 0.11
CCDC42-202ENST00000539522 SH3RF3Q8TEJ3 882 aaPredicted RBP15.75■□□□□ 0.11
CCDC42-202ENST00000539522 OSBP2Q969R2 916 aa15.75■□□□□ 0.11
CCDC42-202ENST00000539522 SEC62Q99442 399 aaKnown RBP15.75■□□□□ 0.11
CCDC42-202ENST00000539522 GLIS2Q9BZE0 524 aaPredicted RBP15.75■□□□□ 0.11
CCDC42-202ENST00000539522 PUS7LQ9H0K6 701 aaKnown RBP15.75■□□□□ 0.11
CCDC42-202ENST00000539522 IL25Q9H293 177 aa15.75■□□□□ 0.11
CCDC42-202ENST00000539522 AATFQ9NY61 560 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC42-202ENST00000539522 FAM198AQ9UFP1 575 aa15.75■□□□□ 0.11
CCDC42-202ENST00000539522 PASKQ96RG2 1323 aa15.74■□□□□ 0.11
CCDC42-202ENST00000539522 PITPNM2Q9BZ72 1349 aa15.74■□□□□ 0.11
CCDC42-202ENST00000539522 IGSF3O75054 1194 aa15.74■□□□□ 0.11
CCDC42-202ENST00000539522 TOMM70O94826 608 aa15.74■□□□□ 0.11
CCDC42-202ENST00000539522 RGS3P49796 1198 aa15.74■□□□□ 0.11
CCDC42-202ENST00000539522 UBE3CQ15386 1083 aa15.74■□□□□ 0.11
CCDC42-202ENST00000539522 CHADLQ6NUI6 762 aa15.74■□□□□ 0.11
CCDC42-202ENST00000539522 RBM46Q8TBY0 533 aaKnown RBP15.74■□□□□ 0.11
CCDC42-202ENST00000539522 EVI5LQ96CN4 794 aa15.74■□□□□ 0.11
CCDC42-202ENST00000539522 TEPSINQ96N21 525 aa15.74■□□□□ 0.11
CCDC42-202ENST00000539522 TRPM7Q96QT4 1865 aa15.74■□□□□ 0.11
CCDC42-202ENST00000539522 M0R2C6 588 aa15.73■□□□□ 0.11
CCDC42-202ENST00000539522 FOXP2O15409 715 aa15.73■□□□□ 0.11
CCDC42-202ENST00000539522 RNF113AO15541 343 aaKnown RBP15.73■□□□□ 0.11
CCDC42-202ENST00000539522 PRAMEF18Q5VWM3 479 aa15.73■□□□□ 0.11
CCDC42-202ENST00000539522 SH3BP5LQ7L8J4 393 aa15.73■□□□□ 0.11
CCDC42-202ENST00000539522 CNTROBQ8N137 903 aa15.73■□□□□ 0.11
CCDC42-202ENST00000539522 LCORLQ8N3X6 602 aa15.73■□□□□ 0.11
CCDC42-202ENST00000539522 USP40Q9NVE5 1235 aa15.73■□□□□ 0.11
CCDC42-202ENST00000539522 NAV1Q8NEY1 1877 aa15.73■□□□□ 0.11
CCDC42-202ENST00000539522 A0A0D9SFI3 127 aa15.72■□□□□ 0.11
CCDC42-202ENST00000539522 SLURP2P0DP57 97 aa15.72■□□□□ 0.11
CCDC42-202ENST00000539522 GSTO1P78417 241 aa15.72■□□□□ 0.11
CCDC42-202ENST00000539522 ZMYM1Q5SVZ6 1142 aa15.72■□□□□ 0.11
CCDC42-202ENST00000539522 USP48Q86UV5 1035 aa15.72■□□□□ 0.11
CCDC42-202ENST00000539522 FAM227BQ96M60 508 aa15.72■□□□□ 0.11
CCDC42-202ENST00000539522 FSD1Q9BTV5 496 aa15.72■□□□□ 0.11
CCDC42-202ENST00000539522 IDI2Q9BXS1 227 aa15.72■□□□□ 0.11
CCDC42-202ENST00000539522 MKRN1Q9UHC7 482 aaKnown RBP15.72■□□□□ 0.11
CCDC42-202ENST00000539522 CLEC11AQ9Y240 323 aa15.72■□□□□ 0.11
CCDC42-202ENST00000539522 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
CCDC42-202ENST00000539522 MYH1P12882 1939 aa15.71■□□□□ 0.11
CCDC42-202ENST00000539522 TCP10L2B9ZVM9 353 aa15.71■□□□□ 0.11
CCDC42-202ENST00000539522 LDHCP07864 332 aa15.71■□□□□ 0.11
CCDC42-202ENST00000539522 EVX2Q03828 476 aa15.71■□□□□ 0.11
CCDC42-202ENST00000539522 RILPL2Q969X0 211 aa15.71■□□□□ 0.11
CCDC42-202ENST00000539522 ARMT1Q9H993 441 aa15.71■□□□□ 0.11
CCDC42-202ENST00000539522 ATRNL1Q5VV63 1379 aa15.71■□□□□ 0.11
CCDC42-202ENST00000539522 OTOFQ9HC10 1997 aa15.71■□□□□ 0.1
CCDC42-202ENST00000539522 TRIM6-TRIM34B2RNG4 842 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 PRKAB2O43741 272 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 NMIQ13287 307 aaPredicted RBP15.7■□□□□ 0.1
CCDC42-202ENST00000539522 RASA3Q14644 834 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 FKBP1CQ5VVH2 108 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 CCDC129Q6ZRS4 1044 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 KRT26Q7Z3Y9 468 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 SLF2Q8IX21 1173 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 APPBP2Q92624 585 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 TMEM39BQ9GZU3 492 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 DEFB129Q9H1M3 183 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 VEZTQ9HBM0 779 aa15.7■□□□□ 0.1
CCDC42-202ENST00000539522 MAGEB6P1A0A0J9YX57 407 aa15.69■□□□□ 0.1
CCDC42-202ENST00000539522 SMIM22K7EJ46 135 aa15.69■□□□□ 0.1
CCDC42-202ENST00000539522 MBD4O95243 580 aa15.69■□□□□ 0.1
CCDC42-202ENST00000539522 BMP2KLQ5H9B9 411 aa15.69■□□□□ 0.1
CCDC42-202ENST00000539522 CST9Q5W186 159 aa15.69■□□□□ 0.1
CCDC42-202ENST00000539522 TMED8Q6PL24 325 aaPredicted RBP15.69■□□□□ 0.1
CCDC42-202ENST00000539522 CDC37L1Q7L3B6 337 aa15.69■□□□□ 0.1
CCDC42-202ENST00000539522 ZNF589Q86UQ0 364 aaPredicted RBP15.69■□□□□ 0.1
CCDC42-202ENST00000539522 SMC1BQ8NDV3 1235 aa15.69■□□□□ 0.1
CCDC42-202ENST00000539522 DCPSQ96C86 337 aaKnown RBP15.69■□□□□ 0.1
CCDC42-202ENST00000539522 CDCA5Q96FF9 252 aa15.69■□□□□ 0.1
CCDC42-202ENST00000539522 STRBPQ96SI9 672 aaKnown RBP15.69■□□□□ 0.1
CCDC42-202ENST00000539522 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC42-202ENST00000539522 FZD1Q9UP38 647 aa15.69■□□□□ 0.1
CCDC42-202ENST00000539522 DDTLA6NHG4 134 aaPredicted RBP15.68■□□□□ 0.1
CCDC42-202ENST00000539522 ZFYP08048 801 aaPredicted RBP15.68■□□□□ 0.1
CCDC42-202ENST00000539522 TCP10Q12799 353 aa15.68■□□□□ 0.1
CCDC42-202ENST00000539522 NBPF12Q5TAG4 269 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms