RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 CTDSPL2Q05D32 466 aa13.16□□□□□ -0.3
CTCFL-212ENST00000539382 DIXDC1Q155Q3 683 aa13.16□□□□□ -0.3
CTCFL-212ENST00000539382 WDR66Q8TBY9 1149 aa13.16□□□□□ -0.3
CTCFL-212ENST00000539382 CHAMP1Q96JM3 812 aa13.16□□□□□ -0.3
CTCFL-212ENST00000539382 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-212ENST00000539382 NAPBQ9H115 298 aa13.16□□□□□ -0.3
CTCFL-212ENST00000539382 AATFQ9NY61 560 aaKnown RBP eCLIP13.16□□□□□ -0.3
CTCFL-212ENST00000539382 UTRNP46939 3433 aa13.16□□□□□ -0.3
CTCFL-212ENST00000539382 EVX2Q03828 476 aa13.16□□□□□ -0.3
CTCFL-212ENST00000539382 ANKRD1Q15327 319 aa13.16□□□□□ -0.3
CTCFL-212ENST00000539382 STYK1Q6J9G0 422 aa13.16□□□□□ -0.3
CTCFL-212ENST00000539382 DPP8Q6V1X1 898 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-212ENST00000539382 SH2B1Q9NRF2 756 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-212ENST00000539382 NEDD4P46934 1319 aa13.16□□□□□ -0.3
CTCFL-212ENST00000539382 GNAT2P19087 354 aa13.15□□□□□ -0.3
CTCFL-212ENST00000539382 APOBRQ0VD83 1088 aa13.15□□□□□ -0.3
CTCFL-212ENST00000539382 FOXD4L5Q5VV16 416 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-212ENST00000539382 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
CTCFL-212ENST00000539382 STK11IPQ8N1F8 1099 aa13.15□□□□□ -0.3
CTCFL-212ENST00000539382 C7orf43Q8WVR3 580 aa13.15□□□□□ -0.3
CTCFL-212ENST00000539382 FOXD4L4Q8WXT5 416 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-212ENST00000539382 ZMYM6O95789 1325 aa13.15□□□□□ -0.3
CTCFL-212ENST00000539382 LDHBP07195 334 aaKnown RBP13.15□□□□□ -0.3
CTCFL-212ENST00000539382 MCM4P33991 863 aa13.15□□□□□ -0.3
CTCFL-212ENST00000539382 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
CTCFL-212ENST00000539382 ILDR1Q86SU0 546 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-212ENST00000539382 DZIP1Q86YF9 867 aaKnown RBP13.15□□□□□ -0.3
CTCFL-212ENST00000539382 CYP2D7A0A087X1C5 515 aa13.14□□□□□ -0.31
CTCFL-212ENST00000539382 B4E1Z4 1266 aa13.14□□□□□ -0.31
CTCFL-212ENST00000539382 TDO2P48775 406 aa13.14□□□□□ -0.31
CTCFL-212ENST00000539382 NCOA7Q8NI08 942 aa13.14□□□□□ -0.31
CTCFL-212ENST00000539382 PRC1O43663 620 aa13.14□□□□□ -0.31
CTCFL-212ENST00000539382 GTF2IP78347 998 aa13.14□□□□□ -0.31
CTCFL-212ENST00000539382 NUCB2P80303 420 aa13.14□□□□□ -0.31
CTCFL-212ENST00000539382 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
CTCFL-212ENST00000539382 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
CTCFL-212ENST00000539382 C10orf71Q711Q0 1435 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 ZBTB7AO95365 584 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 BRD1O95696 1058 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 KCNA3P22001 575 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 GJB2P29033 226 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 FGD1P98174 961 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 SCRN1Q12765 414 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 MFSD14BQ5SR56 506 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 SPTY2D1Q68D10 685 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-212ENST00000539382 MXD3Q9BW11 206 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 SENP2Q9HC62 589 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 BRPF3Q9ULD4 1205 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-212ENST00000539382 BAZ2AQ9UIF9 1905 aaKnown RBP13.13□□□□□ -0.31
CTCFL-212ENST00000539382 MCM5P33992 734 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
CTCFL-212ENST00000539382 FBXL16Q8N461 479 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 CERS5Q8N5B7 392 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 GTF3C6Q969F1 213 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 NACAP1Q9BZK3 213 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 COA1Q9GZY4 146 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
CTCFL-212ENST00000539382 SNED1Q8TER0 1413 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 JAK2O60674 1132 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 PDIA3P30101 505 aaKnown RBP13.12□□□□□ -0.31
CTCFL-212ENST00000539382 PPARAQ07869 468 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 CTR9Q6PD62 1173 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 CLEC17AQ6ZS10 378 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 CCDC125Q86Z20 511 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 NCOA5Q9HCD5 579 aaKnown RBP13.12□□□□□ -0.31
CTCFL-212ENST00000539382 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-212ENST00000539382 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 MAST2Q6P0Q8 1798 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
CTCFL-212ENST00000539382 SYT1P21579 422 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 SH3RF3Q8TEJ3 882 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-212ENST00000539382 SLC16A10Q8TF71 515 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 CNKSR1Q969H4 720 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 RTFDC1Q9BY42 306 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-212ENST00000539382 DBNDD1Q9H9R9 158 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 USP17L21D6R901 530 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 PFKFB2O60825 505 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 KDM4AO75164 1064 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 BAG4O95429 457 aaKnown RBP13.11□□□□□ -0.31
CTCFL-212ENST00000539382 CTDNEP1O95476 244 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 EVCP57679 992 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 CCT2P78371 535 aaKnown RBP13.11□□□□□ -0.31
CTCFL-212ENST00000539382 STAG1Q8WVM7 1258 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
CTCFL-212ENST00000539382 C21orf2O43822 256 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 CYP2D6P10635 497 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 DPEP1P16444 411 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 TRDNQ13061 729 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 RAB11FIP4Q86YS3 637 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 IGDCC4Q8TDY8 1250 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 MKRN1Q9UHC7 482 aaKnown RBP13.1□□□□□ -0.31
CTCFL-212ENST00000539382 ANAPC4Q9UJX5 808 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 HPS5Q9UPZ3 1129 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms