RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-211	ENST00000539318	ANGEL2	Q5VTE6	544 aa	Known RBP	10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	MAP1S	Q66K74	1059 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	NAA16	Q6N069	864 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	CDC42EP5	Q6NZY7	148 aa		10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	SKAP1	Q86WV1	359 aa		10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	TICAM2	Q86XR7	235 aa		10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	DZIP1	Q86YF9	867 aa	Known RBP	10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	SLF2	Q8IX21	1173 aa		10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	CNTROB	Q8N137	903 aa		10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	MAGEB6	Q8N7X4	407 aa		10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	ZNF70	Q9UC06	446 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPB4-211	ENST00000539318	MROH7-TTC4	A0A0A0MT08	1334 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	MAP4K4	O95819	1239 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	CYP7A1	P22680	504 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	UBE3C	Q15386	1083 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	SLFNL1	Q499Z3	407 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	SLC9C2	Q5TAH2	1124 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	FKBP1C	Q5VVH2	108 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	DLK2	Q6UY11	383 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	CDC37L1	Q7L3B6	337 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	EVI5L	Q96CN4	794 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	CLEC11A	Q9Y240	323 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	CDK5RAP2	Q96SN8	1893 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	PASK	Q96RG2	1323 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	ZNF532	Q9HCE3	1301 aa		10.84	□□□□□ -0.67
NPIPB4-211	ENST00000539318	CLRN2	A0PK11	232 aa		10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	WDHD1	O75717	1129 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	GSPT1	P15170	499 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	BTD	P43251	543 aa		10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	FSTL1	Q12841	308 aa		10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	TTC22	Q5TAA0	569 aa		10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	USP48	Q86UV5	1035 aa		10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	SMC1B	Q8NDV3	1235 aa		10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	DCPS	Q96C86	337 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	RIOK1	Q9BRS2	568 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	IDI2	Q9BXS1	227 aa		10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	USP40	Q9NVE5	1235 aa		10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	GGA3	Q9NZ52	723 aa		10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	SCAF8	Q9UPN6	1271 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-211	ENST00000539318	MAST2	Q6P0Q8	1798 aa		10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	AK9	Q5TCS8	1911 aa		10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	CNTNAP1	P78357	1384 aa		10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	RNF113A	O15541	343 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	MYO1B	O43795	1136 aa		10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	DYNLL1	P63167	89 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	FMR1	Q06787	632 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	KRT26	Q7Z3Y9	468 aa		10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	FAM83A	Q86UY5	434 aa		10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	FAM198A	Q9UFP1	575 aa		10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	TRPM7	Q96QT4	1865 aa		10.82	□□□□□ -0.68
NPIPB4-211	ENST00000539318	RFX7	Q2KHR2	1363 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	BAG3	O95817	575 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	ZFY	P08048	801 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	SDS	P20132	328 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	CACNB3	P54284	484 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	NFIA	Q12857	509 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	RASA3	Q14644	834 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	ZMYM1	Q5SVZ6	1142 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	CST9	Q5W186	159 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	ZSCAN25	Q6NSZ9	544 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	ZFPM1	Q8IX07	1006 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	OSBP2	Q969R2	916 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	TEPSIN	Q96N21	525 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	PUS7L	Q9H0K6	701 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	DEFB129	Q9H1M3	183 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	DDX4	Q9NQI0	724 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	MKRN1	Q9UHC7	482 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	FOCAD	Q5VW36	1801 aa		10.81	□□□□□ -0.68
NPIPB4-211	ENST00000539318	TRIM6-TRIM34	B2RNG4	842 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	TCP10L2	B9ZVM9	353 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	ADM5	C9JUS6	153 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	TRAF5	O00463	557 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	ENTPD3	O75355	529 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	PRAMEF18	Q5VWM3	479 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	CERS3	Q8IU89	383 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	SULF1	Q8IWU6	871 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	MIGA1	Q8NAN2	632 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	FAM151A	Q8WW52	585 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	APPBP2	Q92624	585 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	VEZT	Q9HBM0	779 aa		10.8	□□□□□ -0.68
NPIPB4-211	ENST00000539318	MAGEB6P1	A0A0J9YX57	407 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	PLCG2	P16885	1265 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	RGS3	P49796	1198 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	C1QTNF8	P60827	252 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	MAP3K10	Q02779	954 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	TNFAIP1	Q13829	316 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	SH3BP5L	Q7L8J4	393 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	RILPL2	Q969X0	211 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	STRBP	Q96SI9	672 aa	Known RBP	10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	SEC62	Q99442	399 aa	Known RBP	10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	FSD1	Q9BTV5	496 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	TMEM39B	Q9GZU3	492 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	PPP2R3B	Q9Y5P8	575 aa		10.79	□□□□□ -0.68
NPIPB4-211	ENST00000539318	MYH1	P12882	1939 aa		10.78	□□□□□ -0.68
NPIPB4-211	ENST00000539318	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms