RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 AMOTL1Q8IY63 956 aa18.36■□□□□ 0.53
VAMP1-207ENST00000539047 HDAC9Q9UKV0 1011 aa18.36■□□□□ 0.53
VAMP1-207ENST00000539047 SLC27A2O14975 620 aa18.35■□□□□ 0.53
VAMP1-207ENST00000539047 EIF6P56537 245 aaKnown RBP18.35■□□□□ 0.53
VAMP1-207ENST00000539047 HDLBPQ00341 1268 aaKnown RBP18.35■□□□□ 0.53
VAMP1-207ENST00000539047 DIXDC1Q155Q3 683 aa18.35■□□□□ 0.53
VAMP1-207ENST00000539047 VPS53Q5VIR6 699 aa18.35■□□□□ 0.53
VAMP1-207ENST00000539047 RIOK1Q9BRS2 568 aaKnown RBP18.35■□□□□ 0.53
VAMP1-207ENST00000539047 BAZ2AQ9UIF9 1905 aaKnown RBP18.35■□□□□ 0.53
VAMP1-207ENST00000539047 SBF1O95248 1867 aa18.35■□□□□ 0.53
VAMP1-207ENST00000539047 ADAMTSL1Q8N6G6 1762 aa18.35■□□□□ 0.53
VAMP1-207ENST00000539047 COL4A5P29400 1685 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 GAKO14976 1311 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 YDJCA8MPS7 323 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 ZNF213O14771 459 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 RAD17O75943 681 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 BTDP43251 543 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 USP5P45974 858 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 ALX1Q15699 326 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 CIAPIN1Q6FI81 312 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 GIMAP6Q6P9H5 292 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 RSBN1LQ6PCB5 846 aaPredicted RBP18.34■□□□□ 0.53
VAMP1-207ENST00000539047 HHIPL2Q6UWX4 724 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 HSCBQ8IWL3 235 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 OGFOD1Q8N543 542 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 CERS5Q8N5B7 392 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 FAM163AQ96GL9 167 aaPredicted RBP18.34■□□□□ 0.53
VAMP1-207ENST00000539047 SNX14Q9Y5W7 946 aa18.34■□□□□ 0.53
VAMP1-207ENST00000539047 LMNB1P20700 586 aa18.33■□□□□ 0.52
VAMP1-207ENST00000539047 RBM5P52756 815 aaKnown RBP eCLIP18.33■□□□□ 0.52
VAMP1-207ENST00000539047 PPP4CP60510 307 aa18.33■□□□□ 0.52
VAMP1-207ENST00000539047 DYNLL1P63167 89 aaKnown RBP18.33■□□□□ 0.52
VAMP1-207ENST00000539047 GRIK5Q16478 980 aa18.33■□□□□ 0.52
VAMP1-207ENST00000539047 KIAA0825Q8IV33 1275 aa18.33■□□□□ 0.52
VAMP1-207ENST00000539047 ZNF384Q8TF68 577 aa18.33■□□□□ 0.52
VAMP1-207ENST00000539047 ATP8A2Q9NTI2 1148 aa18.33■□□□□ 0.52
VAMP1-207ENST00000539047 PALD1Q9ULE6 856 aa18.33■□□□□ 0.52
VAMP1-207ENST00000539047 MYH1P12882 1939 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 GPR75-ASB3A0A0A6YYF3 556 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 PSMD14O00487 310 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 FGAP02671 866 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 VIL1P09327 827 aaKnown RBP18.32■□□□□ 0.52
VAMP1-207ENST00000539047 MMP14P50281 582 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 SCNN1DP51172 638 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 IFNL3Q8IZI9 196 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 AGBL3Q8NEM8 1001 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 KCNB2Q92953 911 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 IL17RAQ96F46 866 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
VAMP1-207ENST00000539047 MXD3Q9BW11 206 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 MRIQ9BWK5 157 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 KCNQ5Q9NR82 932 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 SERPINA10Q9UK55 444 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 DAGLAQ9Y4D2 1042 aa18.32■□□□□ 0.52
VAMP1-207ENST00000539047 GSG1L2A8MUP6 293 aa18.31■□□□□ 0.52
VAMP1-207ENST00000539047 HMGB1P09429 215 aaKnown RBP18.31■□□□□ 0.52
VAMP1-207ENST00000539047 RPS12P25398 132 aaKnown RBP18.31■□□□□ 0.52
VAMP1-207ENST00000539047 CRKP46108 304 aa18.31■□□□□ 0.52
VAMP1-207ENST00000539047 TRDNQ13061 729 aa18.31■□□□□ 0.52
VAMP1-207ENST00000539047 TEX11Q8IYF3 940 aa18.31■□□□□ 0.52
VAMP1-207ENST00000539047 TM6SF1Q9BZW5 370 aa18.31■□□□□ 0.52
VAMP1-207ENST00000539047 ARPP21Q9UBL0 812 aaPredicted RBP18.31■□□□□ 0.52
VAMP1-207ENST00000539047 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
VAMP1-207ENST00000539047 SLC3A2P08195 630 aaKnown RBP18.3■□□□□ 0.52
VAMP1-207ENST00000539047 CYP21A2P08686 494 aa18.3■□□□□ 0.52
VAMP1-207ENST00000539047 CASTP20810 708 aaKnown RBP18.3■□□□□ 0.52
VAMP1-207ENST00000539047 TSGA10IPQ3SY00 556 aa18.3■□□□□ 0.52
VAMP1-207ENST00000539047 BLOC1S2Q6QNY1 142 aa18.3■□□□□ 0.52
VAMP1-207ENST00000539047 RALYLQ86SE5 291 aaKnown RBP18.3■□□□□ 0.52
VAMP1-207ENST00000539047 SDR42E1Q8WUS8 393 aa18.3■□□□□ 0.52
VAMP1-207ENST00000539047 KIF2CQ99661 725 aa18.3■□□□□ 0.52
VAMP1-207ENST00000539047 DDX60LQ5H9U9 1706 aaKnown RBP18.29■□□□□ 0.52
VAMP1-207ENST00000539047 PRKAB2O43741 272 aa18.29■□□□□ 0.52
VAMP1-207ENST00000539047 MCM2P49736 904 aa18.29■□□□□ 0.52
VAMP1-207ENST00000539047 NEK4P51957 841 aa18.29■□□□□ 0.52
VAMP1-207ENST00000539047 CXCL9Q07325 125 aa18.29■□□□□ 0.52
VAMP1-207ENST00000539047 RASEFQ8IZ41 740 aa18.29■□□□□ 0.52
VAMP1-207ENST00000539047 SH3RF3Q8TEJ3 882 aaPredicted RBP18.29■□□□□ 0.52
VAMP1-207ENST00000539047 ZDHHC15Q96MV8 337 aa18.29■□□□□ 0.52
VAMP1-207ENST00000539047 RNF41Q9H4P4 317 aaPredicted RBP18.29■□□□□ 0.52
VAMP1-207ENST00000539047 EPB41L4AQ9HCS5 686 aaPredicted RBP18.29■□□□□ 0.52
VAMP1-207ENST00000539047 TMOD2Q9NZR1 351 aa18.29■□□□□ 0.52
VAMP1-207ENST00000539047 FOXP2O15409 715 aa18.28■□□□□ 0.52
VAMP1-207ENST00000539047 USP17L8P0C7I0 530 aa18.28■□□□□ 0.52
VAMP1-207ENST00000539047 HAND2P61296 217 aa18.28■□□□□ 0.52
VAMP1-207ENST00000539047 IPO9Q96P70 1041 aaKnown RBP18.28■□□□□ 0.52
VAMP1-207ENST00000539047 NEK1Q96PY6 1258 aa18.28■□□□□ 0.52
VAMP1-207ENST00000539047 CNNM2Q9H8M5 875 aa18.28■□□□□ 0.52
VAMP1-207ENST00000539047 MYH8P13535 1937 aa18.27■□□□□ 0.52
VAMP1-207ENST00000539047 FZD9O00144 591 aa18.27■□□□□ 0.52
VAMP1-207ENST00000539047 NCOA7Q8NI08 942 aa18.27■□□□□ 0.52
VAMP1-207ENST00000539047 SNX21Q969T3 373 aa18.27■□□□□ 0.52
VAMP1-207ENST00000539047 DCP1AQ9NPI6 582 aaPredicted RBP18.27■□□□□ 0.52
VAMP1-207ENST00000539047 USP40Q9NVE5 1235 aa18.27■□□□□ 0.52
VAMP1-207ENST00000539047 MINDY4BA8MYZ0 360 aa18.26■□□□□ 0.51
VAMP1-207ENST00000539047 E7EWF7 191 aa18.26■□□□□ 0.51
VAMP1-207ENST00000539047 MYO1BO43795 1136 aa18.26■□□□□ 0.51
VAMP1-207ENST00000539047 PCP11498 1178 aaKnown RBP18.26■□□□□ 0.51
VAMP1-207ENST00000539047 FGD1P98174 961 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms