RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 C15orf52Q6ZUT6 534 aaKnown RBP17.4■□□□□ 0.38
ATL3-203ENST00000538786 ZNF384Q8TF68 577 aa17.4■□□□□ 0.38
ATL3-203ENST00000538786 STAG1Q8WVM7 1258 aa17.4■□□□□ 0.38
ATL3-203ENST00000538786 KRT23Q9C075 422 aa17.4■□□□□ 0.38
ATL3-203ENST00000538786 CACNA1SQ13698 1873 aa17.39■□□□□ 0.38
ATL3-203ENST00000538786 IGSF3O75054 1194 aa17.39■□□□□ 0.37
ATL3-203ENST00000538786 MFSD6Q6ZSS7 791 aa17.39■□□□□ 0.37
ATL3-203ENST00000538786 SYAP1Q96A49 352 aaPredicted RBP17.39■□□□□ 0.37
ATL3-203ENST00000538786 NSUN4Q96CB9 384 aaKnown RBP17.39■□□□□ 0.37
ATL3-203ENST00000538786 KLRG2A4D1S0 409 aaPredicted RBP17.39■□□□□ 0.37
ATL3-203ENST00000538786 APBA3O96018 575 aa17.39■□□□□ 0.37
ATL3-203ENST00000538786 HOXA10P31260 410 aaPredicted RBP17.39■□□□□ 0.37
ATL3-203ENST00000538786 MECOMQ03112 1051 aa17.39■□□□□ 0.37
ATL3-203ENST00000538786 NKX2-3Q8TAU0 364 aa17.39■□□□□ 0.37
ATL3-203ENST00000538786 ZSCAN16Q9H4T2 348 aaPredicted RBP17.39■□□□□ 0.37
ATL3-203ENST00000538786 BBOX1O75936 387 aa17.38■□□□□ 0.37
ATL3-203ENST00000538786 CHAF1AQ13111 956 aaPredicted RBP17.38■□□□□ 0.37
ATL3-203ENST00000538786 ZNF827Q17R98 1081 aa17.38■□□□□ 0.37
ATL3-203ENST00000538786 SPTY2D1Q68D10 685 aaPredicted RBP17.38■□□□□ 0.37
ATL3-203ENST00000538786 IGDCC4Q8TDY8 1250 aa17.38■□□□□ 0.37
ATL3-203ENST00000538786 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
ATL3-203ENST00000538786 BRIP1Q9BX63 1249 aa17.38■□□□□ 0.37
ATL3-203ENST00000538786 RNF41Q9H4P4 317 aaPredicted RBP17.38■□□□□ 0.37
ATL3-203ENST00000538786 ANAPC4Q9UJX5 808 aa17.38■□□□□ 0.37
ATL3-203ENST00000538786 PPARAQ07869 468 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 RESTQ13127 1097 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 NLGN1Q8N2Q7 840 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 SDR42E1Q8WUS8 393 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 CRAMP1Q96RY5 1269 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 ZSWIM5Q9P217 1185 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 TACC3Q9Y6A5 838 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 ELP1O95163 1332 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 KDM4AO75164 1064 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 RXRBP28702 533 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 LIFRP42702 1097 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 GPSM2P81274 684 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 GIMAP6Q6P9H5 292 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 ZNF804AQ7Z570 1209 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 SGMS1Q86VZ5 419 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 TDRD7Q8NHU6 1098 aaKnown RBP17.37■□□□□ 0.37
ATL3-203ENST00000538786 MTA3Q9BTC8 594 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 SCAND2PQ9GZW5 306 aaPredicted RBP17.37■□□□□ 0.37
ATL3-203ENST00000538786 INCENPQ9NQS7 918 aa17.37■□□□□ 0.37
ATL3-203ENST00000538786 CPLX1O14810 134 aa17.36■□□□□ 0.37
ATL3-203ENST00000538786 FDPSP14324 419 aaKnown RBP17.36■□□□□ 0.37
ATL3-203ENST00000538786 ATP2B4P23634 1241 aa17.36■□□□□ 0.37
ATL3-203ENST00000538786 DYNLL1P63167 89 aaKnown RBP17.36■□□□□ 0.37
ATL3-203ENST00000538786 TMEM67Q5HYA8 995 aa17.36■□□□□ 0.37
ATL3-203ENST00000538786 FAM173BQ6P4H8 233 aa17.36■□□□□ 0.37
ATL3-203ENST00000538786 SLC51AQ86UW1 340 aa17.36■□□□□ 0.37
ATL3-203ENST00000538786 WDR66Q8TBY9 1149 aa17.36■□□□□ 0.37
ATL3-203ENST00000538786 LY9Q9HBG7 655 aa17.36■□□□□ 0.37
ATL3-203ENST00000538786 PRDX5P30044 214 aa17.35■□□□□ 0.37
ATL3-203ENST00000538786 APOA5Q6Q788 366 aa17.35■□□□□ 0.37
ATL3-203ENST00000538786 FLAD1Q8NFF5 587 aa17.35■□□□□ 0.37
ATL3-203ENST00000538786 METAP2P50579 478 aaKnown RBP eCLIP17.35■□□□□ 0.37
ATL3-203ENST00000538786 TMC4Q7Z404 712 aa17.35■□□□□ 0.37
ATL3-203ENST00000538786 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
ATL3-203ENST00000538786 IFIT3O14879 490 aaKnown RBP17.34■□□□□ 0.37
ATL3-203ENST00000538786 SART3Q15020 963 aaKnown RBP17.34■□□□□ 0.37
ATL3-203ENST00000538786 TTC6Q86TZ1 520 aa17.34■□□□□ 0.37
ATL3-203ENST00000538786 PODXL2Q9NZ53 605 aa17.34■□□□□ 0.37
ATL3-203ENST00000538786 GGA1Q9UJY5 639 aa17.34■□□□□ 0.37
ATL3-203ENST00000538786 SYCE3A1L190 88 aa17.33■□□□□ 0.37
ATL3-203ENST00000538786 ZBTB43O43298 467 aa17.33■□□□□ 0.37
ATL3-203ENST00000538786 UFL1O94874 794 aa17.33■□□□□ 0.37
ATL3-203ENST00000538786 RRP12Q5JTH9 1297 aaKnown RBP17.33■□□□□ 0.37
ATL3-203ENST00000538786 LRSAM1Q6UWE0 723 aa17.33■□□□□ 0.37
ATL3-203ENST00000538786 NFXL1Q6ZNB6 911 aa17.33■□□□□ 0.37
ATL3-203ENST00000538786 CRNKL1Q9BZJ0 848 aaKnown RBP17.33■□□□□ 0.37
ATL3-203ENST00000538786 SENP2Q9HC62 589 aa17.33■□□□□ 0.37
ATL3-203ENST00000538786 TOMM22Q9NS69 142 aa17.33■□□□□ 0.37
ATL3-203ENST00000538786 RGS17Q9UGC6 210 aaPredicted RBP17.33■□□□□ 0.37
ATL3-203ENST00000538786 MAST2Q6P0Q8 1798 aa17.33■□□□□ 0.36
ATL3-203ENST00000538786 MINDY4BA8MYZ0 360 aa17.33■□□□□ 0.36
ATL3-203ENST00000538786 PPFIA3O75145 1194 aa17.33■□□□□ 0.36
ATL3-203ENST00000538786 CDKL5O76039 1030 aa17.33■□□□□ 0.36
ATL3-203ENST00000538786 DZIP1Q86YF9 867 aaKnown RBP17.33■□□□□ 0.36
ATL3-203ENST00000538786 RAB11FIP4Q86YS3 637 aa17.33■□□□□ 0.36
ATL3-203ENST00000538786 RGS22Q8NE09 1264 aa17.33■□□□□ 0.36
ATL3-203ENST00000538786 ORC3Q9UBD5 711 aaPredicted RBP17.33■□□□□ 0.36
ATL3-203ENST00000538786 EP400Q96L91 3159 aa17.32■□□□□ 0.36
ATL3-203ENST00000538786 CCDC69A6NI79 296 aa17.32■□□□□ 0.36
ATL3-203ENST00000538786 LDHBP07195 334 aaKnown RBP17.32■□□□□ 0.36
ATL3-203ENST00000538786 PCP11498 1178 aaKnown RBP17.32■□□□□ 0.36
ATL3-203ENST00000538786 ESR2Q92731 530 aa17.32■□□□□ 0.36
ATL3-203ENST00000538786 SPATA32Q96LK8 384 aa17.32■□□□□ 0.36
ATL3-203ENST00000538786 PANK2Q9BZ23 570 aa17.32■□□□□ 0.36
ATL3-203ENST00000538786 ATP8A2Q9NTI2 1148 aa17.32■□□□□ 0.36
ATL3-203ENST00000538786 AATFQ9NY61 560 aaKnown RBP eCLIP17.32■□□□□ 0.36
ATL3-203ENST00000538786 TFIP11Q9UBB9 837 aaKnown RBP17.32■□□□□ 0.36
ATL3-203ENST00000538786 CFAP45Q9UL16 551 aa17.32■□□□□ 0.36
ATL3-203ENST00000538786 JAG2Q9Y219 1238 aa17.32■□□□□ 0.36
ATL3-203ENST00000538786 SLC12A7Q9Y666 1083 aa17.32■□□□□ 0.36
ATL3-203ENST00000538786 MYH13Q9UKX3 1938 aa17.32■□□□□ 0.36
ATL3-203ENST00000538786 ERICH2A1L162 156 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 FOSBP53539 338 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 CCDC183Q5T5S1 534 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 CTR9Q6PD62 1173 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 CPLX2Q6PUV4 134 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms