RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 NMIQ13287 307 aaPredicted RBP20.72■□□□□ 0.91
CLN6-202ENST00000538696 DLGAP5Q15398 846 aa20.72■□□□□ 0.91
CLN6-202ENST00000538696 RBM26Q5T8P6 1007 aaKnown RBP20.72■□□□□ 0.91
CLN6-202ENST00000538696 APOBEC3HQ6NTF7 200 aaKnown RBP20.72■□□□□ 0.91
CLN6-202ENST00000538696 MIGA1Q8NAN2 632 aa20.72■□□□□ 0.91
CLN6-202ENST00000538696 ESYT1Q9BSJ8 1104 aa20.72■□□□□ 0.91
CLN6-202ENST00000538696 C22orf23Q9BZE7 217 aa20.72■□□□□ 0.91
CLN6-202ENST00000538696 NAV1Q8NEY1 1877 aa20.72■□□□□ 0.91
CLN6-202ENST00000538696 POLR2AP24928 1970 aaKnown RBP20.71■□□□□ 0.91
CLN6-202ENST00000538696 A0A0D9SFI3 127 aa20.71■□□□□ 0.91
CLN6-202ENST00000538696 EPHX2P34913 555 aa20.71■□□□□ 0.91
CLN6-202ENST00000538696 OSBP2Q969R2 916 aa20.71■□□□□ 0.91
CLN6-202ENST00000538696 PRMT6Q96LA8 375 aaPredicted RBP20.71■□□□□ 0.91
CLN6-202ENST00000538696 FAM227BQ96M60 508 aa20.71■□□□□ 0.91
CLN6-202ENST00000538696 PUS7LQ9H0K6 701 aaKnown RBP20.71■□□□□ 0.91
CLN6-202ENST00000538696 TAF1DQ9H5J8 278 aaPredicted RBP20.71■□□□□ 0.91
CLN6-202ENST00000538696 NMRK2Q9NPI5 230 aa20.71■□□□□ 0.91
CLN6-202ENST00000538696 DIAPH3Q9NSV4 1193 aa20.71■□□□□ 0.91
CLN6-202ENST00000538696 AATFQ9NY61 560 aaKnown RBP eCLIP20.71■□□□□ 0.91
CLN6-202ENST00000538696 M0R2C6 588 aa20.7■□□□□ 0.9
CLN6-202ENST00000538696 HIP1O00291 1037 aa20.7■□□□□ 0.9
CLN6-202ENST00000538696 WNT10BO00744 389 aa20.7■□□□□ 0.9
CLN6-202ENST00000538696 HIRAP54198 1017 aaPredicted RBP20.7■□□□□ 0.9
CLN6-202ENST00000538696 DYNLL1P63167 89 aaKnown RBP20.7■□□□□ 0.9
CLN6-202ENST00000538696 SEC62Q99442 399 aaKnown RBP20.7■□□□□ 0.9
CLN6-202ENST00000538696 RIOK1Q9BRS2 568 aaKnown RBP20.7■□□□□ 0.9
CLN6-202ENST00000538696 RRAGCQ9HB90 399 aa20.7■□□□□ 0.9
CLN6-202ENST00000538696 DDX60LQ5H9U9 1706 aaKnown RBP20.7■□□□□ 0.9
CLN6-202ENST00000538696 MAGEB6P1A0A0J9YX57 407 aa20.69■□□□□ 0.9
CLN6-202ENST00000538696 MBD4O95243 580 aa20.69■□□□□ 0.9
CLN6-202ENST00000538696 RHBDL3P58872 404 aa20.69■□□□□ 0.9
CLN6-202ENST00000538696 NBPF9Q3BBW0 867 aa20.69■□□□□ 0.9
CLN6-202ENST00000538696 LCORLQ8N3X6 602 aa20.69■□□□□ 0.9
CLN6-202ENST00000538696 ASTN2O75129 1339 aaPredicted RBP20.69■□□□□ 0.9
CLN6-202ENST00000538696 EIF5BO60841 1220 aaKnown RBP20.68■□□□□ 0.9
CLN6-202ENST00000538696 PPP4CP60510 307 aa20.68■□□□□ 0.9
CLN6-202ENST00000538696 CDC42EP5Q6NZY7 148 aa20.68■□□□□ 0.9
CLN6-202ENST00000538696 CWC27Q6UX04 472 aaKnown RBP20.68■□□□□ 0.9
CLN6-202ENST00000538696 SH3RF3Q8TEJ3 882 aaPredicted RBP20.68■□□□□ 0.9
CLN6-202ENST00000538696 NOL10Q9BSC4 688 aaKnown RBP20.68■□□□□ 0.9
CLN6-202ENST00000538696 IL25Q9H293 177 aa20.68■□□□□ 0.9
CLN6-202ENST00000538696 TDRD3Q9H7E2 651 aaKnown RBP20.68■□□□□ 0.9
CLN6-202ENST00000538696 HELLSQ9NRZ9 838 aa20.68■□□□□ 0.9
CLN6-202ENST00000538696 BAZ2AQ9UIF9 1905 aaKnown RBP20.68■□□□□ 0.9
CLN6-202ENST00000538696 BAG3O95817 575 aa20.67■□□□□ 0.9
CLN6-202ENST00000538696 VEGFAP15692 232 aaPredicted RBP20.67■□□□□ 0.9
CLN6-202ENST00000538696 SPDYE2Q495Y8 402 aa20.67■□□□□ 0.9
CLN6-202ENST00000538696 CCDC129Q6ZRS4 1044 aa20.67■□□□□ 0.9
CLN6-202ENST00000538696 USP50Q70EL3 339 aaPredicted RBP20.67■□□□□ 0.9
CLN6-202ENST00000538696 ARMT1Q9H993 441 aa20.67■□□□□ 0.9
CLN6-202ENST00000538696 MYH1P12882 1939 aa20.67■□□□□ 0.9
CLN6-202ENST00000538696 CLRN2A0PK11 232 aa20.66■□□□□ 0.9
CLN6-202ENST00000538696 GPAA1O43292 621 aa20.66■□□□□ 0.9
CLN6-202ENST00000538696 YY1P25490 414 aa20.66■□□□□ 0.9
CLN6-202ENST00000538696 AIDAQ96BJ3 306 aa20.66■□□□□ 0.9
CLN6-202ENST00000538696 USP40Q9NVE5 1235 aa20.66■□□□□ 0.9
CLN6-202ENST00000538696 ZNF70Q9UC06 446 aaPredicted RBP20.66■□□□□ 0.9
CLN6-202ENST00000538696 RAD50Q92878 1312 aa20.66■□□□□ 0.9
CLN6-202ENST00000538696 REC8O95072 547 aa20.65■□□□□ 0.9
CLN6-202ENST00000538696 RBM25P49756 843 aaKnown RBP20.65■□□□□ 0.9
CLN6-202ENST00000538696 MCMDC2Q4G0Z9 681 aa20.65■□□□□ 0.9
CLN6-202ENST00000538696 ZNF589Q86UQ0 364 aaPredicted RBP20.65■□□□□ 0.9
CLN6-202ENST00000538696 USP26Q9BXU7 913 aa20.65■□□□□ 0.9
CLN6-202ENST00000538696 LAMB1P07942 1786 aa20.65■□□□□ 0.9
CLN6-202ENST00000538696 SGSM2O43147 1006 aa20.64■□□□□ 0.89
CLN6-202ENST00000538696 PLCG2P16885 1265 aa20.64■□□□□ 0.89
CLN6-202ENST00000538696 CACNB3P54284 484 aa20.64■□□□□ 0.89
CLN6-202ENST00000538696 EAPPQ56P03 285 aaPredicted RBP20.64■□□□□ 0.89
CLN6-202ENST00000538696 PNMA8AQ86V59 439 aaPredicted RBP20.64■□□□□ 0.89
CLN6-202ENST00000538696 TEX11Q8IYF3 940 aa20.64■□□□□ 0.89
CLN6-202ENST00000538696 STRBPQ96SI9 672 aaKnown RBP20.64■□□□□ 0.89
CLN6-202ENST00000538696 GPBP1L1Q9HC44 474 aaPredicted RBP20.64■□□□□ 0.89
CLN6-202ENST00000538696 GGA3Q9NZ52 723 aa20.64■□□□□ 0.89
CLN6-202ENST00000538696 MYO1BO43795 1136 aa20.63■□□□□ 0.89
CLN6-202ENST00000538696 WDHD1O75717 1129 aaPredicted RBP20.63■□□□□ 0.89
CLN6-202ENST00000538696 POTEIP0CG38 1075 aa20.63■□□□□ 0.89
CLN6-202ENST00000538696 POTEJP0CG39 1038 aa20.63■□□□□ 0.89
CLN6-202ENST00000538696 CERS3Q8IU89 383 aa20.63■□□□□ 0.89
CLN6-202ENST00000538696 CCDC171Q6TFL3 1326 aa20.63■□□□□ 0.89
CLN6-202ENST00000538696 PRKAB2O43741 272 aa20.62■□□□□ 0.89
CLN6-202ENST00000538696 NFIAQ12857 509 aa20.62■□□□□ 0.89
CLN6-202ENST00000538696 ANGEL2Q5VTE6 544 aaKnown RBP20.62■□□□□ 0.89
CLN6-202ENST00000538696 RUFY2Q8WXA3 655 aa20.62■□□□□ 0.89
CLN6-202ENST00000538696 VEZTQ9HBM0 779 aa20.62■□□□□ 0.89
CLN6-202ENST00000538696 DDX4Q9NQI0 724 aaKnown RBP20.62■□□□□ 0.89
CLN6-202ENST00000538696 TMOD2Q9NZR1 351 aa20.62■□□□□ 0.89
CLN6-202ENST00000538696 SIPA1L1O43166 1804 aa20.62■□□□□ 0.89
CLN6-202ENST00000538696 LAMA4Q16363 1823 aa20.61■□□□□ 0.89
CLN6-202ENST00000538696 SDR42E1Q8WUS8 393 aa20.61■□□□□ 0.89
CLN6-202ENST00000538696 IDI2Q9BXS1 227 aa20.61■□□□□ 0.89
CLN6-202ENST00000538696 CRNKL1Q9BZJ0 848 aaKnown RBP20.61■□□□□ 0.89
CLN6-202ENST00000538696 ANO2Q9NQ90 1003 aa20.61■□□□□ 0.89
CLN6-202ENST00000538696 CNTNAP1P78357 1384 aa20.6■□□□□ 0.89
CLN6-202ENST00000538696 PITPNM2Q9BZ72 1349 aa20.6■□□□□ 0.89
CLN6-202ENST00000538696 FOXP2O15409 715 aa20.6■□□□□ 0.89
CLN6-202ENST00000538696 VPS53Q5VIR6 699 aa20.6■□□□□ 0.89
CLN6-202ENST00000538696 MAPKAPK5Q8IW41 473 aa20.6■□□□□ 0.89
CLN6-202ENST00000538696 ZC3H15Q8WU90 426 aaKnown RBP20.6■□□□□ 0.89
CLN6-202ENST00000538696 TGFBRAP1Q8WUH2 860 aa20.6■□□□□ 0.89
CLN6-202ENST00000538696 FAM198AQ9UFP1 575 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms