RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SLURP2P0DP57 97 aa15.96■□□□□ 0.15
CHFR-216ENST00000538235 RBM5P52756 815 aaKnown RBP eCLIP15.96■□□□□ 0.15
CHFR-216ENST00000538235 FSTL1Q12841 308 aa15.96■□□□□ 0.15
CHFR-216ENST00000538235 CST9Q5W186 159 aa15.96■□□□□ 0.15
CHFR-216ENST00000538235 KRT26Q7Z3Y9 468 aa15.96■□□□□ 0.15
CHFR-216ENST00000538235 DZIP1Q86YF9 867 aaKnown RBP15.96■□□□□ 0.15
CHFR-216ENST00000538235 DDX4Q9NQI0 724 aaKnown RBP15.96■□□□□ 0.15
CHFR-216ENST00000538235 PAG1Q9NWQ8 432 aa15.96■□□□□ 0.15
CHFR-216ENST00000538235 ATAD5Q96QE3 1844 aa15.96■□□□□ 0.14
CHFR-216ENST00000538235 MAST3O60307 1309 aa15.95■□□□□ 0.14
CHFR-216ENST00000538235 THSD7BQ9C0I4 1608 aa15.95■□□□□ 0.14
CHFR-216ENST00000538235 IDH1O75874 414 aaKnown RBP15.95■□□□□ 0.14
CHFR-216ENST00000538235 PDE6AP16499 860 aa15.95■□□□□ 0.14
CHFR-216ENST00000538235 BTDP43251 543 aa15.95■□□□□ 0.14
CHFR-216ENST00000538235 DYNLL1P63167 89 aaKnown RBP15.95■□□□□ 0.14
CHFR-216ENST00000538235 ZFPM1Q8IX07 1006 aa15.95■□□□□ 0.14
CHFR-216ENST00000538235 ZGPATQ8N5A5 531 aaKnown RBP15.95■□□□□ 0.14
CHFR-216ENST00000538235 CDCA5Q96FF9 252 aa15.95■□□□□ 0.14
CHFR-216ENST00000538235 FAM163AQ96GL9 167 aaPredicted RBP15.95■□□□□ 0.14
CHFR-216ENST00000538235 TEPSINQ96N21 525 aa15.95■□□□□ 0.14
CHFR-216ENST00000538235 MRIQ9BWK5 157 aa15.95■□□□□ 0.14
CHFR-216ENST00000538235 LRP2BPQ9P2M1 347 aa15.95■□□□□ 0.14
CHFR-216ENST00000538235 FAM198AQ9UFP1 575 aa15.95■□□□□ 0.14
CHFR-216ENST00000538235 GPR75-ASB3A0A0A6YYF3 556 aa15.94■□□□□ 0.14
CHFR-216ENST00000538235 WDHD1O75717 1129 aaPredicted RBP15.94■□□□□ 0.14
CHFR-216ENST00000538235 MAGEB6Q8N7X4 407 aa15.94■□□□□ 0.14
CHFR-216ENST00000538235 VEZTQ9HBM0 779 aa15.94■□□□□ 0.14
CHFR-216ENST00000538235 ATRNL1Q5VV63 1379 aa15.94■□□□□ 0.14
CHFR-216ENST00000538235 CEP350Q5VT06 3117 aa15.93■□□□□ 0.14
CHFR-216ENST00000538235 TCP10L2B9ZVM9 353 aa15.93■□□□□ 0.14
CHFR-216ENST00000538235 GSPT1P15170 499 aaKnown RBP15.93■□□□□ 0.14
CHFR-216ENST00000538235 MOB2Q70IA6 237 aa15.93■□□□□ 0.14
CHFR-216ENST00000538235 SH3BP5LQ7L8J4 393 aa15.93■□□□□ 0.14
CHFR-216ENST00000538235 MIGA1Q8NAN2 632 aa15.93■□□□□ 0.14
CHFR-216ENST00000538235 SH3RF3Q8TEJ3 882 aaPredicted RBP15.93■□□□□ 0.14
CHFR-216ENST00000538235 TMEM39BQ9GZU3 492 aa15.93■□□□□ 0.14
CHFR-216ENST00000538235 PHIPQ8WWQ0 1821 aa15.93■□□□□ 0.14
CHFR-216ENST00000538235 ZNF532Q9HCE3 1301 aa15.93■□□□□ 0.14
CHFR-216ENST00000538235 CYP7A1P22680 504 aa15.92■□□□□ 0.14
CHFR-216ENST00000538235 ADD2P35612 726 aa15.92■□□□□ 0.14
CHFR-216ENST00000538235 MMP14P50281 582 aa15.92■□□□□ 0.14
CHFR-216ENST00000538235 EVX2Q03828 476 aa15.92■□□□□ 0.14
CHFR-216ENST00000538235 SPTY2D1Q68D10 685 aaPredicted RBP15.92■□□□□ 0.14
CHFR-216ENST00000538235 NAA16Q6N069 864 aaPredicted RBP15.92■□□□□ 0.14
CHFR-216ENST00000538235 CDC37L1Q7L3B6 337 aa15.92■□□□□ 0.14
CHFR-216ENST00000538235 DCPSQ96C86 337 aaKnown RBP15.92■□□□□ 0.14
CHFR-216ENST00000538235 RIOK1Q9BRS2 568 aaKnown RBP15.92■□□□□ 0.14
CHFR-216ENST00000538235 AATFQ9NY61 560 aaKnown RBP eCLIP15.92■□□□□ 0.14
CHFR-216ENST00000538235 DOCK1Q14185 1865 aa15.91■□□□□ 0.14
CHFR-216ENST00000538235 GLRX3O76003 335 aaKnown RBP15.91■□□□□ 0.14
CHFR-216ENST00000538235 RASA3Q14644 834 aa15.91■□□□□ 0.14
CHFR-216ENST00000538235 NBPF12Q5TAG4 269 aaPredicted RBP15.91■□□□□ 0.14
CHFR-216ENST00000538235 KBTBD3Q8NAB2 608 aa15.91■□□□□ 0.14
CHFR-216ENST00000538235 DEFB129Q9H1M3 183 aa15.91■□□□□ 0.14
CHFR-216ENST00000538235 OSBPL3Q9H4L5 887 aa15.91■□□□□ 0.14
CHFR-216ENST00000538235 USP40Q9NVE5 1235 aa15.91■□□□□ 0.14
CHFR-216ENST00000538235 MYH8P13535 1937 aa15.91■□□□□ 0.14
CHFR-216ENST00000538235 RPAP1Q9BWH6 1393 aaPredicted RBP15.9■□□□□ 0.14
CHFR-216ENST00000538235 NEFLP07196 543 aa15.9■□□□□ 0.14
CHFR-216ENST00000538235 HSPA6P17066 643 aa15.9■□□□□ 0.14
CHFR-216ENST00000538235 RGS3P49796 1198 aa15.9■□□□□ 0.14
CHFR-216ENST00000538235 APOBEC3FQ8IUX4 373 aaKnown RBP15.9■□□□□ 0.14
CHFR-216ENST00000538235 SULF1Q8IWU6 871 aa15.9■□□□□ 0.14
CHFR-216ENST00000538235 LCORLQ8N3X6 602 aa15.9■□□□□ 0.14
CHFR-216ENST00000538235 ZNF408Q9H9D4 720 aa15.9■□□□□ 0.14
CHFR-216ENST00000538235 SMIM22K7EJ46 135 aa15.89■□□□□ 0.13
CHFR-216ENST00000538235 CELF2O95319 508 aaKnown RBP15.89■□□□□ 0.13
CHFR-216ENST00000538235 APLP1P51693 650 aa15.89■□□□□ 0.13
CHFR-216ENST00000538235 TCP10Q12799 353 aa15.89■□□□□ 0.13
CHFR-216ENST00000538235 SLC9C2Q5TAH2 1124 aa15.89■□□□□ 0.13
CHFR-216ENST00000538235 CENPQQ7L2Z9 268 aaPredicted RBP15.89■□□□□ 0.13
CHFR-216ENST00000538235 GPATCH3Q96I76 525 aa15.89■□□□□ 0.13
CHFR-216ENST00000538235 SEC62Q99442 399 aaKnown RBP15.89■□□□□ 0.13
CHFR-216ENST00000538235 PUS7LQ9H0K6 701 aaKnown RBP15.89■□□□□ 0.13
CHFR-216ENST00000538235 PTPRFP10586 1907 aa15.89■□□□□ 0.13
CHFR-216ENST00000538235 LAMA4Q16363 1823 aa15.89■□□□□ 0.13
CHFR-216ENST00000538235 DDTLA6NHG4 134 aaPredicted RBP15.88■□□□□ 0.13
CHFR-216ENST00000538235 M0R2C6 588 aa15.88■□□□□ 0.13
CHFR-216ENST00000538235 PPP4CP60510 307 aa15.88■□□□□ 0.13
CHFR-216ENST00000538235 MAP3K12Q12852 859 aa15.88■□□□□ 0.13
CHFR-216ENST00000538235 TTF1Q15361 905 aaPredicted RBP15.88■□□□□ 0.13
CHFR-216ENST00000538235 OSBP2Q969R2 916 aa15.88■□□□□ 0.13
CHFR-216ENST00000538235 IDI2Q9BXS1 227 aa15.88■□□□□ 0.13
CHFR-216ENST00000538235 IL25Q9H293 177 aa15.88■□□□□ 0.13
CHFR-216ENST00000538235 COL2A1P02458 1487 aaPredicted RBP15.88■□□□□ 0.13
CHFR-216ENST00000538235 FOXP2O15409 715 aa15.87■□□□□ 0.13
CHFR-216ENST00000538235 PRKAB2O43741 272 aa15.87■□□□□ 0.13
CHFR-216ENST00000538235 GSTO1P78417 241 aa15.87■□□□□ 0.13
CHFR-216ENST00000538235 PICALMQ13492 652 aa15.87■□□□□ 0.13
CHFR-216ENST00000538235 TTC22Q5TAA0 569 aa15.87■□□□□ 0.13
CHFR-216ENST00000538235 CCDC136Q96JN2 1154 aa15.87■□□□□ 0.13
CHFR-216ENST00000538235 ARMT1Q9H993 441 aa15.87■□□□□ 0.13
CHFR-216ENST00000538235 FLT1P17948 1338 aa15.87■□□□□ 0.13
CHFR-216ENST00000538235 ERC2O15083 957 aa15.86■□□□□ 0.13
CHFR-216ENST00000538235 MYO1BO43795 1136 aa15.86■□□□□ 0.13
CHFR-216ENST00000538235 MBD4O95243 580 aa15.86■□□□□ 0.13
CHFR-216ENST00000538235 PRKG1Q13976 671 aa15.86■□□□□ 0.13
CHFR-216ENST00000538235 FKBP1CQ5VVH2 108 aa15.86■□□□□ 0.13
CHFR-216ENST00000538235 FAM83AQ86UY5 434 aa15.86■□□□□ 0.13
CHFR-216ENST00000538235 MKRN1Q9UHC7 482 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms