RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 NTRK3Q16288 839 aa16.3■□□□□ 0.2
CLPB-209ENST00000538039 GRAMD1CQ8IYS0 662 aa16.3■□□□□ 0.2
CLPB-209ENST00000538039 FAM177A1Q8N128 213 aaPredicted RBP16.3■□□□□ 0.2
CLPB-209ENST00000538039 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
CLPB-209ENST00000538039 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLPB-209ENST00000538039 PKD1L3Q7Z443 1732 aa16.3■□□□□ 0.2
CLPB-209ENST00000538039 SYKP43405 635 aa16.3■□□□□ 0.2
CLPB-209ENST00000538039 ZNF827Q17R98 1081 aa16.3■□□□□ 0.2
CLPB-209ENST00000538039 MICU3Q86XE3 530 aa16.3■□□□□ 0.2
CLPB-209ENST00000538039 KRT222Q8N1A0 295 aa16.3■□□□□ 0.2
CLPB-209ENST00000538039 CMTR1Q8N1G2 835 aaKnown RBP16.3■□□□□ 0.2
CLPB-209ENST00000538039 APPBP2Q92624 585 aa16.3■□□□□ 0.2
CLPB-209ENST00000538039 ZBTB9Q96C00 473 aa16.3■□□□□ 0.2
CLPB-209ENST00000538039 A0A0U1RQJ8 604 aa16.29■□□□□ 0.2
CLPB-209ENST00000538039 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
CLPB-209ENST00000538039 ATRIPQ8WXE1 791 aa16.29■□□□□ 0.2
CLPB-209ENST00000538039 ISCA1Q9BUE6 129 aa16.29■□□□□ 0.2
CLPB-209ENST00000538039 SEC31AO94979 1220 aaKnown RBP16.29■□□□□ 0.2
CLPB-209ENST00000538039 UBASH3AP57075 661 aa16.29■□□□□ 0.2
CLPB-209ENST00000538039 CCDC57Q2TAC2 916 aa16.29■□□□□ 0.2
CLPB-209ENST00000538039 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
CLPB-209ENST00000538039 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
CLPB-209ENST00000538039 PCDHA5Q9Y5H7 936 aa16.29■□□□□ 0.2
CLPB-209ENST00000538039 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
CLPB-209ENST00000538039 CPDO75976 1380 aa16.28■□□□□ 0.2
CLPB-209ENST00000538039 PRR29P0C7W0 189 aa16.28■□□□□ 0.2
CLPB-209ENST00000538039 FMR1Q06787 632 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLPB-209ENST00000538039 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
CLPB-209ENST00000538039 ARHGAP29Q52LW3 1261 aa16.28■□□□□ 0.2
CLPB-209ENST00000538039 WWC3Q9ULE0 1092 aa16.28■□□□□ 0.2
CLPB-209ENST00000538039 SMIM22K7EJ46 135 aa16.28■□□□□ 0.2
CLPB-209ENST00000538039 PLA2G4AP47712 749 aa16.28■□□□□ 0.2
CLPB-209ENST00000538039 APOA5Q6Q788 366 aa16.28■□□□□ 0.2
CLPB-209ENST00000538039 WDR24Q96S15 920 aa16.28■□□□□ 0.2
CLPB-209ENST00000538039 VWA3AA6NCI4 1184 aa16.27■□□□□ 0.2
CLPB-209ENST00000538039 SH2B2O14492 632 aaPredicted RBP16.27■□□□□ 0.2
CLPB-209ENST00000538039 TOB1P50616 345 aaPredicted RBP16.27■□□□□ 0.2
CLPB-209ENST00000538039 MDM2Q00987 491 aaPredicted RBP16.27■□□□□ 0.2
CLPB-209ENST00000538039 GABPB1Q06547 395 aaPredicted RBP16.27■□□□□ 0.2
CLPB-209ENST00000538039 HLFQ16534 295 aa16.27■□□□□ 0.2
CLPB-209ENST00000538039 SLC9C2Q5TAH2 1124 aa16.27■□□□□ 0.2
CLPB-209ENST00000538039 CCDC150Q8NCX0 1101 aa16.27■□□□□ 0.2
CLPB-209ENST00000538039 IGDCC4Q8TDY8 1250 aa16.27■□□□□ 0.2
CLPB-209ENST00000538039 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLPB-209ENST00000538039 UBN2Q6ZU65 1347 aa16.27■□□□□ 0.2
CLPB-209ENST00000538039 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.2
CLPB-209ENST00000538039 USP49Q70CQ1 688 aa16.27■□□□□ 0.2
CLPB-209ENST00000538039 GREM2Q9H772 168 aa16.27■□□□□ 0.2
CLPB-209ENST00000538039 RESP18Q5W5W9 173 aa16.27■□□□□ 0.19
CLPB-209ENST00000538039 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.19
CLPB-209ENST00000538039 HOMER1Q86YM7 354 aa16.27■□□□□ 0.19
CLPB-209ENST00000538039 TRMT44Q8IYL2 757 aaKnown RBP16.27■□□□□ 0.19
CLPB-209ENST00000538039 C19orf44Q9H6X5 657 aa16.27■□□□□ 0.19
CLPB-209ENST00000538039 RIPOR2Q9Y4F9 1068 aa16.27■□□□□ 0.19
CLPB-209ENST00000538039 PARP3Q9Y6F1 533 aa16.27■□□□□ 0.19
CLPB-209ENST00000538039 MYH7P12883 1935 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 IKBKBO14920 756 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 GPTP24298 496 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 METAP2P50579 478 aaKnown RBP eCLIP16.26■□□□□ 0.19
CLPB-209ENST00000538039 ADKP55263 362 aaKnown RBP16.26■□□□□ 0.19
CLPB-209ENST00000538039 CTDSPL2Q05D32 466 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 ZRSR1Q15695 479 aaKnown RBP16.26■□□□□ 0.19
CLPB-209ENST00000538039 CFAP100Q494V2 611 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 TOGARAM2Q6ZUX3 1019 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 CCDC82Q8N4S0 544 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 ANGEL1Q9UNK9 670 aaKnown RBP16.26■□□□□ 0.19
CLPB-209ENST00000538039 KCNJ14Q9UNX9 436 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 MST1RQ04912 1400 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 SPEF2Q9C093 1822 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 ZMYM6O95789 1325 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 SERPINC1P01008 464 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 ADD2P35612 726 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 VSTM4Q8IW00 320 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 HELBQ8NG08 1087 aaPredicted RBP16.26■□□□□ 0.19
CLPB-209ENST00000538039 SHISA4Q96DD7 197 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 IRX2Q9BZI1 471 aaPredicted RBP16.26■□□□□ 0.19
CLPB-209ENST00000538039 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
CLPB-209ENST00000538039 PDE4CQ08493 712 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 TCIRG1Q13488 830 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLPB-209ENST00000538039 CARD6Q9BX69 1037 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 ATG3Q9NT62 314 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 BTBD18B2RXH4 712 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 SASH3O75995 380 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 APPP05067 770 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 PNMA6AP0CW24 399 aaPredicted RBP16.25■□□□□ 0.19
CLPB-209ENST00000538039 PHKA1P46020 1223 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 MTF1Q14872 753 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 ZKSCAN3Q9BRR0 538 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 LY9Q9HBG7 655 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 EPB41L4AQ9HCS5 686 aaPredicted RBP16.25■□□□□ 0.19
CLPB-209ENST00000538039 ZNF532Q9HCE3 1301 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 IDH1O75874 414 aaKnown RBP16.25■□□□□ 0.19
CLPB-209ENST00000538039 CSF1RP07333 972 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 MYL5Q02045 173 aa16.25■□□□□ 0.19
CLPB-209ENST00000538039 ZCCHC17Q9NP64 241 aaKnown RBP16.25■□□□□ 0.19
CLPB-209ENST00000538039 ZRANB2O95218 330 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLPB-209ENST00000538039 DHX16O60231 1041 aaKnown RBP16.24■□□□□ 0.19
CLPB-209ENST00000538039 URI1O94763 535 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms