RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 MAP3K15Q6ZN16 1313 aa14.02□□□□□ -0.17
CPSF7-218ENST00000537641 KIF28PB7ZC32 967 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 POLR3DP05423 398 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-218ENST00000537641 TIMM10P62072 90 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 TRIM28Q13263 835 aaKnown RBP14.01□□□□□ -0.17
CPSF7-218ENST00000537641 TTLL5Q6EMB2 1281 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 OTUD7BQ6GQQ9 843 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 RALYLQ86SE5 291 aaKnown RBP14.01□□□□□ -0.17
CPSF7-218ENST00000537641 VSTM4Q8IW00 320 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 ELOA2Q8IYF1 753 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-218ENST00000537641 APPBP2Q92624 585 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 CALCOCO1Q9P1Z2 691 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 FHOD1Q9Y613 1164 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 ZMYM6O95789 1325 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 EFCAB8A8MWE9 144 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 BIN1O00499 593 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 TADA3O75528 432 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 CDKL5O76039 1030 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 ZRANB2O95218 330 aaKnown RBP eCLIP14.01□□□□□ -0.17
CPSF7-218ENST00000537641 LMOD1P29536 600 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-218ENST00000537641 UBASH3AP57075 661 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 TCIRG1Q13488 830 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 ARHGAP29Q52LW3 1261 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 TMCO3Q6UWJ1 677 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 UBXN4Q92575 508 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 NOL10Q9BSC4 688 aaKnown RBP14.01□□□□□ -0.17
CPSF7-218ENST00000537641 HSD3B7Q9H2F3 369 aa14.01□□□□□ -0.17
CPSF7-218ENST00000537641 CCDC9Q9Y3X0 531 aaKnown RBP14.01□□□□□ -0.17
CPSF7-218ENST00000537641 MYH3P11055 1940 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 ATRNO75882 1429 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 COL16A1Q07092 1604 aaPredicted RBP14□□□□□ -0.17
CPSF7-218ENST00000537641 PNMA6AP0CW24 399 aaPredicted RBP14□□□□□ -0.17
CPSF7-218ENST00000537641 ANTXR2P58335 489 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 CCDC158Q5M9N0 1113 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 TRIM65Q6PJ69 517 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 OLFM4Q6UX06 510 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 MNS1Q8NEH6 495 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 PIGBQ92521 554 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 MPHOSPH8Q99549 860 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 BTG4Q9NY30 223 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 ROBO1Q9Y6N7 1651 aa14□□□□□ -0.17
CPSF7-218ENST00000537641 AHDC1Q5TGY3 1603 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-218ENST00000537641 FOXP2O15409 715 aa13.99□□□□□ -0.17
CPSF7-218ENST00000537641 ARHGAP6O43182 974 aa13.99□□□□□ -0.17
CPSF7-218ENST00000537641 WDHD1O75717 1129 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-218ENST00000537641 STARD3NLO95772 234 aa13.99□□□□□ -0.17
CPSF7-218ENST00000537641 SERPINC1P01008 464 aa13.99□□□□□ -0.17
CPSF7-218ENST00000537641 TOP1P11387 765 aaKnown RBP13.99□□□□□ -0.17
CPSF7-218ENST00000537641 TTC39AQ5SRH9 613 aa13.99□□□□□ -0.17
CPSF7-218ENST00000537641 RESP18Q5W5W9 173 aa13.99□□□□□ -0.17
CPSF7-218ENST00000537641 KIF6Q6ZMV9 814 aa13.99□□□□□ -0.17
CPSF7-218ENST00000537641 REXO1L1PQ8IX06 675 aa13.99□□□□□ -0.17
CPSF7-218ENST00000537641 BCL11BQ9C0K0 894 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-218ENST00000537641 GPHNQ9NQX3 736 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-218ENST00000537641 AKAP2Q9Y2D5 859 aa13.99□□□□□ -0.17
CPSF7-218ENST00000537641 CUTAO60888 179 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 PPFIA3O75145 1194 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 PTPAQ15257 358 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 LRRC24Q50LG9 513 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 CPLX2Q6PUV4 134 aaKnown RBP13.98□□□□□ -0.17
CPSF7-218ENST00000537641 LRRN4CLQ8ND94 238 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 CEP126Q9P2H0 1117 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 ASAP1Q9ULH1 1129 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 BCL9O00512 1426 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 FGAP02671 866 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 PCCAP05165 728 aaPredicted RBP13.98□□□□□ -0.17
CPSF7-218ENST00000537641 ATP1A3P13637 1013 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 CYP2C19P33261 490 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 PLA2G4AP47712 749 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 WASHC4Q2M389 1173 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 CFAP100Q494V2 611 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 DNAJC10Q8IXB1 793 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 ALG1Q9BT22 464 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 PLA2G12BQ9BX93 195 aa13.98□□□□□ -0.17
CPSF7-218ENST00000537641 NUP98P52948 1817 aa13.97□□□□□ -0.17
CPSF7-218ENST00000537641 ZNF213O14771 459 aa13.97□□□□□ -0.17
CPSF7-218ENST00000537641 HAND2P61296 217 aa13.97□□□□□ -0.17
CPSF7-218ENST00000537641 TEX35Q5T0J7 233 aa13.97□□□□□ -0.17
CPSF7-218ENST00000537641 SHC4Q6S5L8 630 aa13.97□□□□□ -0.17
CPSF7-218ENST00000537641 VPS37DQ86XT2 251 aa13.97□□□□□ -0.17
CPSF7-218ENST00000537641 TMEM139Q8IV31 216 aa13.97□□□□□ -0.17
CPSF7-218ENST00000537641 DPF2Q92785 391 aa13.97□□□□□ -0.17
CPSF7-218ENST00000537641 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.97□□□□□ -0.17
CPSF7-218ENST00000537641 HOOK1Q9UJC3 728 aaKnown RBP13.97□□□□□ -0.17
CPSF7-218ENST00000537641 PARP3Q9Y6F1 533 aa13.97□□□□□ -0.17
CPSF7-218ENST00000537641 STK36Q9NRP7 1315 aa13.97□□□□□ -0.17
CPSF7-218ENST00000537641 VWA3AA6NCI4 1184 aa13.96□□□□□ -0.17
CPSF7-218ENST00000537641 NPHP1O15259 732 aa13.96□□□□□ -0.17
CPSF7-218ENST00000537641 URI1O94763 535 aaPredicted RBP13.96□□□□□ -0.17
CPSF7-218ENST00000537641 TRDNQ13061 729 aa13.96□□□□□ -0.17
CPSF7-218ENST00000537641 TBX2Q13207 712 aaPredicted RBP13.96□□□□□ -0.17
CPSF7-218ENST00000537641 CCDC57Q2TAC2 916 aa13.96□□□□□ -0.17
CPSF7-218ENST00000537641 KRT40Q6A162 431 aa13.96□□□□□ -0.17
CPSF7-218ENST00000537641 ZNF594Q96JF6 807 aaPredicted RBP13.96□□□□□ -0.17
CPSF7-218ENST00000537641 DACH1Q9UI36 760 aa13.96□□□□□ -0.17
CPSF7-218ENST00000537641 ANGEL1Q9UNK9 670 aaKnown RBP13.96□□□□□ -0.17
CPSF7-218ENST00000537641 DOT1LQ8TEK3 1739 aa13.96□□□□□ -0.17
CPSF7-218ENST00000537641 KAT6BQ8WYB5 2073 aa13.96□□□□□ -0.18
CPSF7-218ENST00000537641 SH2B2O14492 632 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-218ENST00000537641 MARCKSP29966 332 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms