RNA–Protein interactions for RNA: ENST00000537062.1

NPIPA1-205, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 2

Gene NPIPA1, Length 568 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-205	ENST00000537062	TUBB2B	Q9BVA1	445 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	HPS5	Q9UPZ3	1129 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	HPSE	Q9Y251	543 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	NDUFB9	Q9Y6M9	179 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ADAMTSL3	P82987	1691 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	PCDH11X	Q9BZA7	1347 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	PCDH11Y	Q9BZA8	1340 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	MEGF6	O75095	1541 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	EFCAB8	A8MWE9	144 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	NBPF26	B4DH59	902 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	SLFN14	P0C7P3	912 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	UQCRFS1P1	P0C7P4	283 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ATF3	P18847	181 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	IARS	P41252	1262 aa	Known RBP	10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	METAP2	P50579	478 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	IFIT5	Q13325	482 aa	Known RBP	10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	NKX1-1	Q15270	411 aa	Predicted RBP	10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	UBE3C	Q15386	1083 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	LRRC24	Q50LG9	513 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	HSP90AB3P	Q58FF7	597 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	NBPF14	Q5TI25	921 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	JAKMIP3	Q5VZ66	844 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TTLL5	Q6EMB2	1281 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	NBPF10	Q6P3W6	841 aa	Known RBP	10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TMCO3	Q6UWJ1	677 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	SYT10	Q6XYQ8	523 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CHST3	Q7LGC8	479 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	VSTM4	Q8IW00	320 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	NBPF15	Q8N660	670 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	MLKL	Q8NB16	471 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TMX1	Q9H3N1	280 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CNNM2	Q9H8M5	875 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	DNAI1	Q9UI46	699 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CEP131	Q9UPN4	1083 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TBC1D2B	Q9UPU7	963 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	NWD2	Q9ULI1	1742 aa		10.8	□□□□□ -0.68
NPIPA1-205	ENST00000537062	GPAA1	O43292	621 aa		10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ZBTB43	O43298	467 aa		10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CSF1R	P07333	972 aa		10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	SSRP1	Q08945	709 aa	Known RBP	10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ELF2	Q15723	593 aa		10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	KRT40	Q6A162	431 aa		10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	FBXO38	Q6PIJ6	1188 aa		10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	KRBA2	Q6ZNG9	492 aa		10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TMTC2	Q8N394	836 aa		10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ZNF579	Q8NAF0	562 aa	Known RBP	10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ZCRB1	Q8TBF4	217 aa	Known RBP	10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CCDC9	Q9Y3X0	531 aa	Known RBP	10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CDHR2	Q9BYE9	1310 aa		10.79	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ATRN	O75882	1429 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	DCC	P43146	1447 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CCDC196	A0A1B0GTZ2	297 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	SH2B2	O14492	632 aa	Predicted RBP	10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	STX10	O60499	249 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	LMOD1	P29536	600 aa	Predicted RBP	10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CASQ1	P31415	396 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ADD2	P35612	726 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	LIFR	P42702	1097 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	RCAN1	P53805	252 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ANTXR2	P58335	489 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	PPP2R5B	Q15173	497 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	PTPA	Q15257	358 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CFAP100	Q494V2	611 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	KIF6	Q6ZMV9	814 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TTLL7	Q6ZT98	887 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	SGMS1	Q86VZ5	419 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	KRI1	Q8N9T8	703 aa	Known RBP	10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CNNM3	Q8NE01	707 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	KRT23	Q9C075	422 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CALCOCO1	Q9P1Z2	691 aa		10.78	□□□□□ -0.68
NPIPA1-205	ENST00000537062	PAPPA	Q13219	1627 aa		10.77	□□□□□ -0.68
NPIPA1-205	ENST00000537062	POTEB2	H3BUK9	544 aa		10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	BIN1	O00499	593 aa		10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	WDHD1	O75717	1129 aa	Predicted RBP	10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	CHGB	P05060	677 aa		10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	HAND2	P61296	217 aa		10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	NAA30	Q147X3	362 aa	Predicted RBP	10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	RILPL1	Q5EBL4	403 aa		10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	NFXL1	Q6ZNB6	911 aa		10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	VPS37D	Q86XT2	251 aa		10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	TRIM22	Q8IYM9	498 aa		10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	GPR161	Q8N6U8	529 aa	Known RBP	10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	ENOX1	Q8TC92	643 aa	Known RBP	10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	FBXW7	Q969H0	707 aa		10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	RBM33	Q96EV2	1170 aa	Known RBP	10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	ZNF594	Q96JF6	807 aa	Predicted RBP	10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	KCNH3	Q9ULD8	1083 aa		10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062		V9GYY5	206 aa	Predicted RBP	10.77	□□□□□ -0.69
NPIPA1-205	ENST00000537062	ANKRD18B	A2A2Z9	1011 aa		10.76	□□□□□ -0.69
NPIPA1-205	ENST00000537062	KIF28P	B7ZC32	967 aa		10.76	□□□□□ -0.69
NPIPA1-205	ENST00000537062	URI1	O94763	535 aa	Predicted RBP	10.76	□□□□□ -0.69
NPIPA1-205	ENST00000537062	FMNL1	O95466	1100 aa	Predicted RBP	10.76	□□□□□ -0.69
NPIPA1-205	ENST00000537062	BMP15	O95972	392 aa		10.76	□□□□□ -0.69
NPIPA1-205	ENST00000537062	TUBB	P07437	444 aa		10.76	□□□□□ -0.69
NPIPA1-205	ENST00000537062	GNAT2	P19087	354 aa		10.76	□□□□□ -0.69
NPIPA1-205	ENST00000537062	CDK11B	P21127	795 aa	Known RBP	10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms