RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
YBX3-206ENST00000536823 PRKRIP1Q9H875 184 aaPredicted RBP9.27□□□□□ -0.93
YBX3-206ENST00000536823 TIMMDC1Q9NPL8 285 aa9.27□□□□□ -0.93
YBX3-206ENST00000536823 PHF24Q9UPV7 400 aa9.27□□□□□ -0.93
YBX3-206ENST00000536823 LAMB4A4D0S4 1761 aa9.27□□□□□ -0.93
YBX3-206ENST00000536823 BRCA1P38398 1863 aaKnown RBP9.26□□□□□ -0.93
YBX3-206ENST00000536823 NRXN2Q9P2S2 1712 aa9.26□□□□□ -0.93
YBX3-206ENST00000536823 A0A087WZG4 1122 aa9.26□□□□□ -0.93
YBX3-206ENST00000536823 POLRMTO00411 1230 aaKnown RBP9.26□□□□□ -0.93
YBX3-206ENST00000536823 TM4SF1P30408 202 aa9.26□□□□□ -0.93
YBX3-206ENST00000536823 IL6STP40189 918 aaPredicted RBP9.26□□□□□ -0.93
YBX3-206ENST00000536823 TAF7Q15545 349 aaPredicted RBP9.26□□□□□ -0.93
YBX3-206ENST00000536823 NLRP3Q96P20 1036 aa9.26□□□□□ -0.93
YBX3-206ENST00000536823 N4BP2Q86UW6 1770 aaPredicted RBP9.26□□□□□ -0.93
YBX3-206ENST00000536823 AFDNP55196 1824 aaKnown RBP9.26□□□□□ -0.93
YBX3-206ENST00000536823 BCORQ6W2J9 1755 aa9.25□□□□□ -0.93
YBX3-206ENST00000536823 A1BGP04217 495 aa9.25□□□□□ -0.93
YBX3-206ENST00000536823 SNRPA1P09661 255 aaKnown RBP9.25□□□□□ -0.93
YBX3-206ENST00000536823 TGFB2P61812 414 aa9.25□□□□□ -0.93
YBX3-206ENST00000536823 NFIXQ14938 502 aa9.25□□□□□ -0.93
YBX3-206ENST00000536823 WDR43Q15061 677 aaKnown RBP eCLIP9.25□□□□□ -0.93
YBX3-206ENST00000536823 PNISRQ8TF01 805 aaKnown RBP9.25□□□□□ -0.93
YBX3-206ENST00000536823 THUMPD2Q9BTF0 503 aaKnown RBP9.25□□□□□ -0.93
YBX3-206ENST00000536823 PRAMEF22A3QJZ6 481 aa9.24□□□□□ -0.93
YBX3-206ENST00000536823 SPATA31C2B4DYI2 1134 aa9.24□□□□□ -0.93
YBX3-206ENST00000536823 THBS1P07996 1170 aa9.24□□□□□ -0.93
YBX3-206ENST00000536823 TMPOP42166 694 aaKnown RBP9.24□□□□□ -0.93
YBX3-206ENST00000536823 LMOD3Q0VAK6 560 aa9.24□□□□□ -0.93
YBX3-206ENST00000536823 WDR44Q5JSH3 913 aa9.24□□□□□ -0.93
YBX3-206ENST00000536823 PROCA1Q8NCQ7 364 aaPredicted RBP9.24□□□□□ -0.93
YBX3-206ENST00000536823 GRIP2Q9C0E4 1043 aa9.24□□□□□ -0.93
YBX3-206ENST00000536823 NOP53Q9NZM5 478 aaKnown RBP9.24□□□□□ -0.93
YBX3-206ENST00000536823 ZNF330Q9Y3S2 320 aaPredicted RBP9.24□□□□□ -0.93
YBX3-206ENST00000536823 USP16Q9Y5T5 823 aa9.24□□□□□ -0.93
YBX3-206ENST00000536823 A0A0G2JLW4 131 aa9.23□□□□□ -0.93
YBX3-206ENST00000536823 CAMTA2O94983 1202 aa9.23□□□□□ -0.93
YBX3-206ENST00000536823 DPEP1P16444 411 aa9.23□□□□□ -0.93
YBX3-206ENST00000536823 RIPK4P57078 832 aa9.23□□□□□ -0.93
YBX3-206ENST00000536823 TAS1R3Q7RTX0 852 aa9.23□□□□□ -0.93
YBX3-206ENST00000536823 NPM2Q86SE8 214 aaKnown RBP9.23□□□□□ -0.93
YBX3-206ENST00000536823 POLR3EQ9NVU0 708 aa9.23□□□□□ -0.93
YBX3-206ENST00000536823 MIS18AQ9NYP9 233 aa9.23□□□□□ -0.93
YBX3-206ENST00000536823 WWC3Q9ULE0 1092 aa9.23□□□□□ -0.93
YBX3-206ENST00000536823 ARFGEF1Q9Y6D6 1849 aa9.22□□□□□ -0.93
YBX3-206ENST00000536823 SERPINB2P05120 415 aa9.22□□□□□ -0.93
YBX3-206ENST00000536823 PIP4K2AP48426 406 aaPredicted RBP9.22□□□□□ -0.93
YBX3-206ENST00000536823 EIF4A1P60842 406 aaKnown RBP9.22□□□□□ -0.93
YBX3-206ENST00000536823 FLIIQ13045 1269 aa9.22□□□□□ -0.93
YBX3-206ENST00000536823 SLCO4C1Q6ZQN7 724 aa9.22□□□□□ -0.93
YBX3-206ENST00000536823 CCDC146Q8IYE0 955 aa9.22□□□□□ -0.93
YBX3-206ENST00000536823 RUNDC1Q96C34 613 aa9.22□□□□□ -0.93
YBX3-206ENST00000536823 TBC1D2BQ9UPU7 963 aa9.22□□□□□ -0.93
YBX3-206ENST00000536823 ADCY9O60503 1353 aa9.22□□□□□ -0.93
YBX3-206ENST00000536823 CARMIL3Q8ND23 1372 aa9.22□□□□□ -0.93
YBX3-206ENST00000536823 GIGYF1O75420 1035 aaPredicted RBP9.21□□□□□ -0.94
YBX3-206ENST00000536823 KCNA3P22001 575 aa9.21□□□□□ -0.94
YBX3-206ENST00000536823 TBC1D9BQ66K14 1250 aa9.21□□□□□ -0.94
YBX3-206ENST00000536823 PNMA1Q8ND90 353 aa9.21□□□□□ -0.94
YBX3-206ENST00000536823 GPAMQ9HCL2 828 aa9.21□□□□□ -0.94
YBX3-206ENST00000536823 BABAM1Q9NWV8 329 aa9.21□□□□□ -0.94
YBX3-206ENST00000536823 TSPYL4Q9UJ04 414 aa9.21□□□□□ -0.94
YBX3-206ENST00000536823 BCS1LQ9Y276 419 aa9.21□□□□□ -0.94
YBX3-206ENST00000536823 RRP7AQ9Y3A4 280 aaKnown RBP9.21□□□□□ -0.94
YBX3-206ENST00000536823 DLEC1Q9Y238 1755 aa9.21□□□□□ -0.94
YBX3-206ENST00000536823 ANKRD31Q8N7Z5 1873 aa9.21□□□□□ -0.94
YBX3-206ENST00000536823 BMP4P12644 408 aa9.2□□□□□ -0.94
YBX3-206ENST00000536823 BICDL1Q6ZP65 573 aa9.2□□□□□ -0.94
YBX3-206ENST00000536823 KRTAP9-9Q9BYP9 154 aa9.2□□□□□ -0.94
YBX3-206ENST00000536823 KRTAP9-4Q9BYQ2 154 aa9.2□□□□□ -0.94
YBX3-206ENST00000536823 PIM2Q9P1W9 311 aa9.2□□□□□ -0.94
YBX3-206ENST00000536823 GGA1Q9UJY5 639 aa9.2□□□□□ -0.94
YBX3-206ENST00000536823 CHRNA5P30532 468 aa9.19□□□□□ -0.94
YBX3-206ENST00000536823 DGKGP49619 791 aa9.19□□□□□ -0.94
YBX3-206ENST00000536823 CLN3Q13286 438 aa9.19□□□□□ -0.94
YBX3-206ENST00000536823 DALRD3Q5D0E6 543 aaKnown RBP9.19□□□□□ -0.94
YBX3-206ENST00000536823 CLEC4GQ6UXB4 293 aa9.19□□□□□ -0.94
YBX3-206ENST00000536823 ZNF652Q9Y2D9 606 aa9.19□□□□□ -0.94
YBX3-206ENST00000536823 ATP10DQ9P241 1426 aa9.19□□□□□ -0.94
YBX3-206ENST00000536823 COL11A2P13942 1736 aaPredicted RBP9.19□□□□□ -0.94
YBX3-206ENST00000536823 GATA4P43694 442 aa9.18□□□□□ -0.94
YBX3-206ENST00000536823 FOXD4L6Q3SYB3 417 aaPredicted RBP9.18□□□□□ -0.94
YBX3-206ENST00000536823 PRR5LQ6MZQ0 368 aa9.18□□□□□ -0.94
YBX3-206ENST00000536823 FOXD4L3Q6VB84 417 aaPredicted RBP9.18□□□□□ -0.94
YBX3-206ENST00000536823 CNBD1Q8NA66 436 aa9.18□□□□□ -0.94
YBX3-206ENST00000536823 BTBD6Q96KE9 485 aa9.18□□□□□ -0.94
YBX3-206ENST00000536823 SETDB2Q96T68 719 aa9.18□□□□□ -0.94
YBX3-206ENST00000536823 MAP3K15Q6ZN16 1313 aa9.17□□□□□ -0.94
YBX3-206ENST00000536823 CHL1O00533 1208 aa9.17□□□□□ -0.94
YBX3-206ENST00000536823 CC2D2BQ6DHV5 1058 aa9.17□□□□□ -0.94
YBX3-206ENST00000536823 C2CD5Q86YS7 1000 aa9.17□□□□□ -0.94
YBX3-206ENST00000536823 EPS8L1Q8TE68 723 aa9.17□□□□□ -0.94
YBX3-206ENST00000536823 BRIP1Q9BX63 1249 aa9.17□□□□□ -0.94
YBX3-206ENST00000536823 ZFP64Q9NPA5 681 aa9.17□□□□□ -0.94
YBX3-206ENST00000536823 NUP98P52948 1817 aa9.17□□□□□ -0.94
YBX3-206ENST00000536823 ERVV-1B6SEH8 477 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 H0YIN7 160 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 C2CD2LO14523 706 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 NPHP1O15259 732 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 EPXP11678 715 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 PDE6BP35913 854 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms