RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 NMIQ13287 307 aaPredicted RBP18.76■□□□□ 0.59
CNN1-202ENST00000535659 CWC27Q6UX04 472 aaKnown RBP18.76■□□□□ 0.59
CNN1-202ENST00000535659 FAM227BQ96M60 508 aa18.76■□□□□ 0.59
CNN1-202ENST00000535659 SEC62Q99442 399 aaKnown RBP18.76■□□□□ 0.59
CNN1-202ENST00000535659 AATFQ9NY61 560 aaKnown RBP eCLIP18.76■□□□□ 0.59
CNN1-202ENST00000535659 CDC45O75419 566 aa18.75■□□□□ 0.59
CNN1-202ENST00000535659 KIF4BQ2VIQ3 1234 aa18.75■□□□□ 0.59
CNN1-202ENST00000535659 NBPF9Q3BBW0 867 aa18.75■□□□□ 0.59
CNN1-202ENST00000535659 MCMDC2Q4G0Z9 681 aa18.75■□□□□ 0.59
CNN1-202ENST00000535659 USP50Q70EL3 339 aaPredicted RBP18.75■□□□□ 0.59
CNN1-202ENST00000535659 ZNF526Q8TF50 670 aaPredicted RBP18.75■□□□□ 0.59
CNN1-202ENST00000535659 TAF1DQ9H5J8 278 aaPredicted RBP18.75■□□□□ 0.59
CNN1-202ENST00000535659 USP40Q9NVE5 1235 aa18.75■□□□□ 0.59
CNN1-202ENST00000535659 WDR90Q96KV7 1748 aa18.75■□□□□ 0.59
CNN1-202ENST00000535659 AK9Q5TCS8 1911 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 MYO1BO43795 1136 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 HIRAP54198 1017 aaPredicted RBP18.74■□□□□ 0.59
CNN1-202ENST00000535659 DYNLL1P63167 89 aaKnown RBP18.74■□□□□ 0.59
CNN1-202ENST00000535659 CERS3Q8IU89 383 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 TRPM4Q8TD43 1214 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 AIDAQ96BJ3 306 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 RIOK1Q9BRS2 568 aaKnown RBP18.74■□□□□ 0.59
CNN1-202ENST00000535659 TDRD3Q9H7E2 651 aaKnown RBP18.74■□□□□ 0.59
CNN1-202ENST00000535659 ADAMTSL1Q8N6G6 1762 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 A0A0D9SFI3 127 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 PLCG2P16885 1265 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 CDC42EP5Q6NZY7 148 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 CASC1Q6TDU7 716 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 PNMA8AQ86V59 439 aaPredicted RBP18.74■□□□□ 0.59
CNN1-202ENST00000535659 RUFY2Q8WXA3 655 aa18.74■□□□□ 0.59
CNN1-202ENST00000535659 MYH7P12883 1935 aa18.73■□□□□ 0.59
CNN1-202ENST00000535659 MYH2Q9UKX2 1941 aa18.73■□□□□ 0.59
CNN1-202ENST00000535659 M0R2C6 588 aa18.73■□□□□ 0.59
CNN1-202ENST00000535659 MBD4O95243 580 aa18.73■□□□□ 0.59
CNN1-202ENST00000535659 RHBDL3P58872 404 aa18.73■□□□□ 0.59
CNN1-202ENST00000535659 STRBPQ96SI9 672 aaKnown RBP18.73■□□□□ 0.59
CNN1-202ENST00000535659 ARMT1Q9H993 441 aa18.73■□□□□ 0.59
CNN1-202ENST00000535659 GPBP1L1Q9HC44 474 aaPredicted RBP18.73■□□□□ 0.59
CNN1-202ENST00000535659 NMRK2Q9NPI5 230 aa18.73■□□□□ 0.59
CNN1-202ENST00000535659 LCORLQ8N3X6 602 aa18.72■□□□□ 0.59
CNN1-202ENST00000535659 SH3RF3Q8TEJ3 882 aaPredicted RBP18.72■□□□□ 0.59
CNN1-202ENST00000535659 ZNF70Q9UC06 446 aaPredicted RBP18.72■□□□□ 0.59
CNN1-202ENST00000535659 GPAA1O43292 621 aa18.71■□□□□ 0.59
CNN1-202ENST00000535659 SPDYE2Q495Y8 402 aa18.71■□□□□ 0.59
CNN1-202ENST00000535659 ZC3H15Q8WU90 426 aaKnown RBP18.71■□□□□ 0.59
CNN1-202ENST00000535659 SCN4AP35499 1836 aa18.71■□□□□ 0.59
CNN1-202ENST00000535659 CLRN2A0PK11 232 aa18.7■□□□□ 0.58
CNN1-202ENST00000535659 MFAP1P55081 439 aaKnown RBP18.7■□□□□ 0.58
CNN1-202ENST00000535659 EAPPQ56P03 285 aaPredicted RBP18.7■□□□□ 0.58
CNN1-202ENST00000535659 TEX11Q8IYF3 940 aa18.7■□□□□ 0.58
CNN1-202ENST00000535659 CRNKL1Q9BZJ0 848 aaKnown RBP18.7■□□□□ 0.58
CNN1-202ENST00000535659 SGSM2O43147 1006 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 GNAT2P19087 354 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 CCDC129Q6ZRS4 1044 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 TMOD2Q9NZR1 351 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 PGAP2Q9UHJ9 254 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 SLC4A4Q9Y6R1 1079 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 ASTN2O75129 1339 aaPredicted RBP18.69■□□□□ 0.58
CNN1-202ENST00000535659 RAD50Q92878 1312 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 HSPA6P17066 643 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 ANGEL2Q5VTE6 544 aaKnown RBP18.69■□□□□ 0.58
CNN1-202ENST00000535659 FKBP1CQ5VVH2 108 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 ZNF589Q86UQ0 364 aaPredicted RBP18.69■□□□□ 0.58
CNN1-202ENST00000535659 ESYT1Q9BSJ8 1104 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 IDI2Q9BXS1 227 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 IL25Q9H293 177 aa18.69■□□□□ 0.58
CNN1-202ENST00000535659 CCDC171Q6TFL3 1326 aa18.68■□□□□ 0.58
CNN1-202ENST00000535659 PATL2C9JE40 543 aaKnown RBP18.68■□□□□ 0.58
CNN1-202ENST00000535659 PRKAB2O43741 272 aa18.68■□□□□ 0.58
CNN1-202ENST00000535659 WDHD1O75717 1129 aaPredicted RBP18.68■□□□□ 0.58
CNN1-202ENST00000535659 CACNB3P54284 484 aa18.68■□□□□ 0.58
CNN1-202ENST00000535659 TGFBRAP1Q8WUH2 860 aa18.68■□□□□ 0.58
CNN1-202ENST00000535659 VEZTQ9HBM0 779 aa18.68■□□□□ 0.58
CNN1-202ENST00000535659 CLEC11AQ9Y240 323 aa18.68■□□□□ 0.58
CNN1-202ENST00000535659 USP5P45974 858 aa18.67■□□□□ 0.58
CNN1-202ENST00000535659 NFIAQ12857 509 aa18.67■□□□□ 0.58
CNN1-202ENST00000535659 DCPSQ96C86 337 aaKnown RBP18.67■□□□□ 0.58
CNN1-202ENST00000535659 GSG1L2A8MUP6 293 aa18.66■□□□□ 0.58
CNN1-202ENST00000535659 TCP10L2B9ZVM9 353 aa18.66■□□□□ 0.58
CNN1-202ENST00000535659 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
CNN1-202ENST00000535659 APPP05067 770 aa18.66■□□□□ 0.58
CNN1-202ENST00000535659 SDR42E1Q8WUS8 393 aa18.66■□□□□ 0.58
CNN1-202ENST00000535659 ATP8A2Q9NTI2 1148 aa18.66■□□□□ 0.58
CNN1-202ENST00000535659 GGA3Q9NZ52 723 aa18.66■□□□□ 0.58
CNN1-202ENST00000535659 FAM198AQ9UFP1 575 aa18.66■□□□□ 0.58
CNN1-202ENST00000535659 PITPNM2Q9BZ72 1349 aa18.66■□□□□ 0.58
CNN1-202ENST00000535659 RPAP1Q9BWH6 1393 aaPredicted RBP18.65■□□□□ 0.58
CNN1-202ENST00000535659 ENTPD3O75355 529 aa18.65■□□□□ 0.58
CNN1-202ENST00000535659 POTEIP0CG38 1075 aa18.65■□□□□ 0.58
CNN1-202ENST00000535659 POTEJP0CG39 1038 aa18.65■□□□□ 0.58
CNN1-202ENST00000535659 HSPD1P10809 573 aaKnown RBP18.65■□□□□ 0.58
CNN1-202ENST00000535659 TNNI2P48788 182 aa18.65■□□□□ 0.58
CNN1-202ENST00000535659 PICALMQ13492 652 aa18.65■□□□□ 0.58
CNN1-202ENST00000535659 KIAA1211Q6ZU35 1233 aa18.65■□□□□ 0.58
CNN1-202ENST00000535659 APOBEC3FQ8IUX4 373 aaKnown RBP18.65■□□□□ 0.58
CNN1-202ENST00000535659 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
CNN1-202ENST00000535659 DDX4Q9NQI0 724 aaKnown RBP18.65■□□□□ 0.58
CNN1-202ENST00000535659 TNFAIP1Q13829 316 aa18.64■□□□□ 0.58
CNN1-202ENST00000535659 VPS53Q5VIR6 699 aa18.64■□□□□ 0.58
CNN1-202ENST00000535659 GIMAP6Q6P9H5 292 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms