RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 LMO7Q8WWI1 1683 aa15.44■□□□□ 0.06
HDAC4-214ENST00000535493 TTC39AQ5SRH9 613 aa15.44■□□□□ 0.06
HDAC4-214ENST00000535493 EYA2O00167 538 aa15.44■□□□□ 0.06
HDAC4-214ENST00000535493 ZNF213O14771 459 aa15.44■□□□□ 0.06
HDAC4-214ENST00000535493 KRT40Q6A162 431 aa15.44■□□□□ 0.06
HDAC4-214ENST00000535493 VSTM4Q8IW00 320 aa15.44■□□□□ 0.06
HDAC4-214ENST00000535493 CMTR1Q8N1G2 835 aaKnown RBP15.44■□□□□ 0.06
HDAC4-214ENST00000535493 CNNM3Q8NE01 707 aa15.44■□□□□ 0.06
HDAC4-214ENST00000535493 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-214ENST00000535493 CDK11BP21127 795 aaKnown RBP15.43■□□□□ 0.06
HDAC4-214ENST00000535493 IL15P40933 162 aaPredicted RBP15.43■□□□□ 0.06
HDAC4-214ENST00000535493 FMR1Q06787 632 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDAC4-214ENST00000535493 CYB5R4Q7L1T6 521 aa15.43■□□□□ 0.06
HDAC4-214ENST00000535493 BRAPQ7Z569 592 aa15.43■□□□□ 0.06
HDAC4-214ENST00000535493 TMEM139Q8IV31 216 aa15.43■□□□□ 0.06
HDAC4-214ENST00000535493 SYNE4Q8N205 404 aa15.43■□□□□ 0.06
HDAC4-214ENST00000535493 CPLX3Q8WVH0 158 aa15.43■□□□□ 0.06
HDAC4-214ENST00000535493 XAGE2Q96GT9 111 aa15.43■□□□□ 0.06
HDAC4-214ENST00000535493 COBLO75128 1261 aa15.43■□□□□ 0.06
HDAC4-214ENST00000535493 TBC1D8O95759 1140 aa15.43■□□□□ 0.06
HDAC4-214ENST00000535493 OAS2P29728 719 aaKnown RBP15.43■□□□□ 0.06
HDAC4-214ENST00000535493 PLBD2Q8NHP8 589 aa15.43■□□□□ 0.06
HDAC4-214ENST00000535493 ARGLU1Q9NWB6 273 aaPredicted RBP15.43■□□□□ 0.06
HDAC4-214ENST00000535493 H7C1W4 665 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 GPAA1O43292 621 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 DHX16O60231 1041 aaKnown RBP15.42■□□□□ 0.06
HDAC4-214ENST00000535493 TATP17735 454 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-214ENST00000535493 NCOA7Q8NI08 942 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 BAG1Q99933 345 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-214ENST00000535493 LZTFL1Q9NQ48 299 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 CEP126Q9P2H0 1117 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 MYH15Q9Y2K3 1946 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 B4E1Z4 1266 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 IKBKBO14920 756 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 PRR29P0C7W0 189 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 CABP4P57796 275 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 DHX58Q96C10 678 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 NBPF3Q9H094 633 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 CWC25Q9NXE8 425 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-214ENST00000535493 ABCC6O95255 1503 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 PHLPP2Q6ZVD8 1323 aa15.42■□□□□ 0.06
HDAC4-214ENST00000535493 CASQ1P31415 396 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 METAP2P50579 478 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDAC4-214ENST00000535493 LRRFIP1Q32MZ4 808 aaKnown RBP15.41■□□□□ 0.06
HDAC4-214ENST00000535493 OLFM4Q6UX06 510 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 TBC1D10CQ8IV04 446 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 PARD6BQ9BYG5 372 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 SAMSN1Q9NSI8 373 aaKnown RBP15.41■□□□□ 0.06
HDAC4-214ENST00000535493 TUBE1Q9UJT0 475 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 KCNH3Q9ULD8 1083 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 PTPAQ15257 358 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 CC2D1AQ6P1N0 951 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-214ENST00000535493 KRT28Q7Z3Y7 464 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 IFNL2Q8IZJ0 200 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 CALCOCO1Q9P1Z2 691 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 PUF60Q9UHX1 559 aaKnown RBP15.41■□□□□ 0.06
HDAC4-214ENST00000535493 NFE2L3Q9Y4A8 694 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 C5P01031 1676 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 RFX7Q2KHR2 1363 aa15.41■□□□□ 0.06
HDAC4-214ENST00000535493 CASP1P29466 404 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 PPP2R3AQ06190 1150 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 CCDC158Q5M9N0 1113 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 WWC2Q6AWC2 1192 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 FAM89AQ96GI7 184 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 SEC31BQ9NQW1 1179 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 KCNJ14Q9UNX9 436 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 HPSEQ9Y251 543 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 EFCAB8A8MWE9 144 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 GUCY1A2P33402 732 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 SMC1AQ14683 1233 aaKnown RBP15.4■□□□□ 0.06
HDAC4-214ENST00000535493 NFXL1Q6ZNB6 911 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 KRBA2Q6ZNG9 492 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 USP49Q70CQ1 688 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 MRPL44Q9H9J2 332 aaKnown RBP15.4■□□□□ 0.06
HDAC4-214ENST00000535493 SUGCTQ9HAC7 445 aa15.4■□□□□ 0.06
HDAC4-214ENST00000535493 SOWAHDA6NJG2 315 aa15.39■□□□□ 0.05
HDAC4-214ENST00000535493 CCDC102BQ68D86 513 aa15.39■□□□□ 0.05
HDAC4-214ENST00000535493 TC2NQ8N9U0 490 aa15.39■□□□□ 0.05
HDAC4-214ENST00000535493 CCDC12Q8WUD4 166 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-214ENST00000535493 MAP3K14Q99558 947 aa15.39■□□□□ 0.05
HDAC4-214ENST00000535493 ARHGAP23Q9P227 1491 aa15.39■□□□□ 0.05
HDAC4-214ENST00000535493 BTBD18B2RXH4 712 aa15.39■□□□□ 0.05
HDAC4-214ENST00000535493 POLR2DO15514 142 aaKnown RBP15.39■□□□□ 0.05
HDAC4-214ENST00000535493 RANBP6O60518 1105 aaKnown RBP15.39■□□□□ 0.05
HDAC4-214ENST00000535493 STX17P56962 302 aa15.39■□□□□ 0.05
HDAC4-214ENST00000535493 KLHL10Q6JEL2 608 aa15.39■□□□□ 0.05
HDAC4-214ENST00000535493 ZKSCAN3Q9BRR0 538 aa15.39■□□□□ 0.05
HDAC4-214ENST00000535493 SLC26A6Q9BXS9 759 aa15.39■□□□□ 0.05
HDAC4-214ENST00000535493 IDH1O75874 414 aaKnown RBP15.38■□□□□ 0.05
HDAC4-214ENST00000535493 CCDC57Q2TAC2 916 aa15.38■□□□□ 0.05
HDAC4-214ENST00000535493 MED15Q96RN5 788 aa15.38■□□□□ 0.05
HDAC4-214ENST00000535493 ARHGAP6O43182 974 aa15.38■□□□□ 0.05
HDAC4-214ENST00000535493 TEX33O43247 280 aa15.38■□□□□ 0.05
HDAC4-214ENST00000535493 ZSCAN12O43309 604 aa15.38■□□□□ 0.05
HDAC4-214ENST00000535493 CBFA2T2O43439 604 aa15.38■□□□□ 0.05
HDAC4-214ENST00000535493 RAD51AP2Q09MP3 1159 aa15.38■□□□□ 0.05
HDAC4-214ENST00000535493 TRDNQ13061 729 aa15.38■□□□□ 0.05
HDAC4-214ENST00000535493 MCM6Q14566 821 aa15.38■□□□□ 0.05
HDAC4-214ENST00000535493 SLC9C2Q5TAH2 1124 aa15.38■□□□□ 0.05
HDAC4-214ENST00000535493 ABL1P00519 1130 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms