RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 IL25Q9H293 177 aa14.34□□□□□ -0.11
COMMD9-208ENST00000533643 ADARB2Q9NS39 739 aaKnown RBP14.34□□□□□ -0.11
COMMD9-208ENST00000533643 AATFQ9NY61 560 aaKnown RBP eCLIP14.34□□□□□ -0.11
COMMD9-208ENST00000533643 AK9Q5TCS8 1911 aa14.34□□□□□ -0.11
COMMD9-208ENST00000533643 ADAMTSL1Q8N6G6 1762 aa14.34□□□□□ -0.11
COMMD9-208ENST00000533643 MYH7P12883 1935 aa14.33□□□□□ -0.11
COMMD9-208ENST00000533643 BAG3O95817 575 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 HIRAP54198 1017 aaPredicted RBP14.33□□□□□ -0.12
COMMD9-208ENST00000533643 RHBDL3P58872 404 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 KIF4BQ2VIQ3 1234 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 NBPF9Q3BBW0 867 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 CDC42EP5Q6NZY7 148 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 ZNF589Q86UQ0 364 aaPredicted RBP14.33□□□□□ -0.12
COMMD9-208ENST00000533643 LCORLQ8N3X6 602 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 SH3RF3Q8TEJ3 882 aaPredicted RBP14.33□□□□□ -0.12
COMMD9-208ENST00000533643 RUFY2Q8WXA3 655 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 AIDAQ96BJ3 306 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 STRBPQ96SI9 672 aaKnown RBP14.33□□□□□ -0.12
COMMD9-208ENST00000533643 NOL10Q9BSC4 688 aaKnown RBP14.33□□□□□ -0.12
COMMD9-208ENST00000533643 ESYT1Q9BSJ8 1104 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 ARMT1Q9H993 441 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 USP40Q9NVE5 1235 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 MYH2Q9UKX2 1941 aa14.33□□□□□ -0.12
COMMD9-208ENST00000533643 WDR90Q96KV7 1748 aa14.32□□□□□ -0.12
COMMD9-208ENST00000533643 IQCA1LA6NCM1 817 aa14.32□□□□□ -0.12
COMMD9-208ENST00000533643 WNT10BO00744 389 aa14.32□□□□□ -0.12
COMMD9-208ENST00000533643 SGSM2O43147 1006 aa14.32□□□□□ -0.12
COMMD9-208ENST00000533643 GPAA1O43292 621 aa14.32□□□□□ -0.12
COMMD9-208ENST00000533643 PLCG2P16885 1265 aa14.32□□□□□ -0.12
COMMD9-208ENST00000533643 EPHX2P34913 555 aa14.32□□□□□ -0.12
COMMD9-208ENST00000533643 CASC1Q6TDU7 716 aa14.32□□□□□ -0.12
COMMD9-208ENST00000533643 TAF1DQ9H5J8 278 aaPredicted RBP14.32□□□□□ -0.12
COMMD9-208ENST00000533643 TDRD3Q9H7E2 651 aaKnown RBP14.32□□□□□ -0.12
COMMD9-208ENST00000533643 RRAGCQ9HB90 399 aa14.32□□□□□ -0.12
COMMD9-208ENST00000533643 VEGFAP15692 232 aaPredicted RBP14.31□□□□□ -0.12
COMMD9-208ENST00000533643 SPDYE2Q495Y8 402 aa14.31□□□□□ -0.12
COMMD9-208ENST00000533643 C8orf34Q49A92 452 aa14.31□□□□□ -0.12
COMMD9-208ENST00000533643 USP50Q70EL3 339 aaPredicted RBP14.31□□□□□ -0.12
COMMD9-208ENST00000533643 CERS3Q8IU89 383 aa14.31□□□□□ -0.12
COMMD9-208ENST00000533643 TEX11Q8IYF3 940 aa14.31□□□□□ -0.12
COMMD9-208ENST00000533643 ZNF526Q8TF50 670 aaPredicted RBP14.31□□□□□ -0.12
COMMD9-208ENST00000533643 ZNF70Q9UC06 446 aaPredicted RBP14.31□□□□□ -0.12
COMMD9-208ENST00000533643 ASTN2O75129 1339 aaPredicted RBP14.31□□□□□ -0.12
COMMD9-208ENST00000533643 CCDC171Q6TFL3 1326 aa14.31□□□□□ -0.12
COMMD9-208ENST00000533643 RAD50Q92878 1312 aa14.31□□□□□ -0.12
COMMD9-208ENST00000533643 CLRN2A0PK11 232 aa14.3□□□□□ -0.12
COMMD9-208ENST00000533643 PRKAB2O43741 272 aa14.3□□□□□ -0.12
COMMD9-208ENST00000533643 WDHD1O75717 1129 aaPredicted RBP14.3□□□□□ -0.12
COMMD9-208ENST00000533643 MFAP1P55081 439 aaKnown RBP14.3□□□□□ -0.12
COMMD9-208ENST00000533643 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
COMMD9-208ENST00000533643 NMRK2Q9NPI5 230 aa14.3□□□□□ -0.12
COMMD9-208ENST00000533643 FOXP2O15409 715 aa14.29□□□□□ -0.12
COMMD9-208ENST00000533643 CACNB3P54284 484 aa14.29□□□□□ -0.12
COMMD9-208ENST00000533643 NFIAQ12857 509 aa14.29□□□□□ -0.12
COMMD9-208ENST00000533643 VPS53Q5VIR6 699 aa14.29□□□□□ -0.12
COMMD9-208ENST00000533643 TGFBRAP1Q8WUH2 860 aa14.29□□□□□ -0.12
COMMD9-208ENST00000533643 SLC4A4Q9Y6R1 1079 aa14.29□□□□□ -0.12
COMMD9-208ENST00000533643 GSG1L2A8MUP6 293 aa14.28□□□□□ -0.12
COMMD9-208ENST00000533643 PATL2C9JE40 543 aaKnown RBP14.28□□□□□ -0.12
COMMD9-208ENST00000533643 MYO1BO43795 1136 aa14.28□□□□□ -0.12
COMMD9-208ENST00000533643 HSPD1P10809 573 aaKnown RBP14.28□□□□□ -0.12
COMMD9-208ENST00000533643 GNAT2P19087 354 aa14.28□□□□□ -0.12
COMMD9-208ENST00000533643 SCN4AP35499 1836 aa14.28□□□□□ -0.12
COMMD9-208ENST00000533643 FKBP1CQ5VVH2 108 aa14.28□□□□□ -0.12
COMMD9-208ENST00000533643 PNMA8AQ86V59 439 aaPredicted RBP14.28□□□□□ -0.12
COMMD9-208ENST00000533643 SDR42E1Q8WUS8 393 aa14.28□□□□□ -0.12
COMMD9-208ENST00000533643 IDI2Q9BXS1 227 aa14.28□□□□□ -0.12
COMMD9-208ENST00000533643 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
COMMD9-208ENST00000533643 FAM198AQ9UFP1 575 aa14.28□□□□□ -0.12
COMMD9-208ENST00000533643 TCP10L2B9ZVM9 353 aa14.27□□□□□ -0.13
COMMD9-208ENST00000533643 USP5P45974 858 aa14.27□□□□□ -0.13
COMMD9-208ENST00000533643 PTH1RQ03431 593 aa14.27□□□□□ -0.13
COMMD9-208ENST00000533643 EAPPQ56P03 285 aaPredicted RBP14.27□□□□□ -0.13
COMMD9-208ENST00000533643 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.13
COMMD9-208ENST00000533643 MAPKAPK5Q8IW41 473 aa14.27□□□□□ -0.13
COMMD9-208ENST00000533643 ZFPM1Q8IX07 1006 aa14.27□□□□□ -0.13
COMMD9-208ENST00000533643 LSG1Q9H089 658 aaKnown RBP14.27□□□□□ -0.13
COMMD9-208ENST00000533643 VEZTQ9HBM0 779 aa14.27□□□□□ -0.13
COMMD9-208ENST00000533643 EPB41L4AQ9HCS5 686 aaPredicted RBP14.27□□□□□ -0.13
COMMD9-208ENST00000533643 DCP1AQ9NPI6 582 aaPredicted RBP14.27□□□□□ -0.13
COMMD9-208ENST00000533643 ATP8A2Q9NTI2 1148 aa14.27□□□□□ -0.13
COMMD9-208ENST00000533643 TMOD2Q9NZR1 351 aa14.27□□□□□ -0.13
COMMD9-208ENST00000533643 MKRN1Q9UHC7 482 aaKnown RBP14.27□□□□□ -0.13
COMMD9-208ENST00000533643 PGAP2Q9UHJ9 254 aa14.27□□□□□ -0.13
COMMD9-208ENST00000533643 CNTNAP1P78357 1384 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 RPAP1Q9BWH6 1393 aaPredicted RBP14.26□□□□□ -0.13
COMMD9-208ENST00000533643 FLT1P17948 1338 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
COMMD9-208ENST00000533643 SEC24BO95487 1268 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 APPP05067 770 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 POTEJP0CG39 1038 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 PICALMQ13492 652 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 ALX1Q15699 326 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 GIMAP6Q6P9H5 292 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 ZC3H15Q8WU90 426 aaKnown RBP14.26□□□□□ -0.13
COMMD9-208ENST00000533643 DSCC1Q9BVC3 393 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 ANO2Q9NQ90 1003 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 GGA3Q9NZ52 723 aa14.26□□□□□ -0.13
COMMD9-208ENST00000533643 SCAF8Q9UPN6 1271 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms