RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 ADM5C9JUS6 153 aa17.68■□□□□ 0.42
SF3B2-214ENST00000533595 CDC42EP5Q6NZY7 148 aa17.68■□□□□ 0.42
SF3B2-214ENST00000533595 MAGEB6Q8N7X4 407 aa17.68■□□□□ 0.42
SF3B2-214ENST00000533595 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.68■□□□□ 0.421e-6■■□□□ 13.4
SF3B2-214ENST00000533595 PPP4R2Q9NY27 417 aa17.68■□□□□ 0.42
SF3B2-214ENST00000533595 PASKQ96RG2 1323 aa17.68■□□□□ 0.42
SF3B2-214ENST00000533595 TRAF5O00463 557 aa17.67■□□□□ 0.42
SF3B2-214ENST00000533595 MAP4K4O95819 1239 aaPredicted RBP17.67■□□□□ 0.42
SF3B2-214ENST00000533595 CYP7A1P22680 504 aa17.67■□□□□ 0.42
SF3B2-214ENST00000533595 BTDP43251 543 aa17.67■□□□□ 0.42
SF3B2-214ENST00000533595 TNFAIP1Q13829 316 aa17.67■□□□□ 0.42
SF3B2-214ENST00000533595 SLC9C2Q5TAH2 1124 aa17.67■□□□□ 0.42
SF3B2-214ENST00000533595 NOL10Q9BSC4 688 aaKnown RBP17.67■□□□□ 0.42
SF3B2-214ENST00000533595 OSBPL3Q9H4L5 887 aa17.67■□□□□ 0.42
SF3B2-214ENST00000533595 USP40Q9NVE5 1235 aa17.67■□□□□ 0.42
SF3B2-214ENST00000533595 SCAF8Q9UPN6 1271 aaKnown RBP17.67■□□□□ 0.42
SF3B2-214ENST00000533595 PDE6AP16499 860 aa17.66■□□□□ 0.42
SF3B2-214ENST00000533595 PDE4AP27815 886 aa17.66■□□□□ 0.42
SF3B2-214ENST00000533595 FKBP1CQ5VVH2 108 aa17.66■□□□□ 0.42
SF3B2-214ENST00000533595 TCP10L2B9ZVM9 353 aa17.65■□□□□ 0.42
SF3B2-214ENST00000533595 BAG3O95817 575 aa17.65■□□□□ 0.42
SF3B2-214ENST00000533595 TNNI2P48788 182 aa17.65■□□□□ 0.42
SF3B2-214ENST00000533595 CACNB3P54284 484 aa17.65■□□□□ 0.42
SF3B2-214ENST00000533595 FMR1Q06787 632 aaKnown RBP eCLIP17.65■□□□□ 0.423e-7■■□□□ 12.4
SF3B2-214ENST00000533595 ZSCAN25Q6NSZ9 544 aa17.65■□□□□ 0.42
SF3B2-214ENST00000533595 DLK2Q6UY11 383 aa17.65■□□□□ 0.42
SF3B2-214ENST00000533595 ADGRA1Q86SQ6 560 aa17.65■□□□□ 0.42
SF3B2-214ENST00000533595 KBTBD3Q8NAB2 608 aa17.65■□□□□ 0.42
SF3B2-214ENST00000533595 DEFB129Q9H1M3 183 aa17.65■□□□□ 0.42
SF3B2-214ENST00000533595 PPP4CP60510 307 aa17.64■□□□□ 0.41
SF3B2-214ENST00000533595 RASA3Q14644 834 aa17.64■□□□□ 0.41
SF3B2-214ENST00000533595 CDCA5Q96FF9 252 aa17.64■□□□□ 0.41
SF3B2-214ENST00000533595 AATFQ9NY61 560 aaKnown RBP eCLIP17.64■□□□□ 0.41
SF3B2-214ENST00000533595 PPP2R3BQ9Y5P8 575 aa17.64■□□□□ 0.41
SF3B2-214ENST00000533595 ZNF532Q9HCE3 1301 aa17.64■□□□□ 0.41
SF3B2-214ENST00000533595 TCRBV5S4A2TA0A5A2 114 aa17.63■□□□□ 0.41
SF3B2-214ENST00000533595 PLCG2P16885 1265 aa17.63■□□□□ 0.41
SF3B2-214ENST00000533595 ADD2P35612 726 aa17.63■□□□□ 0.41
SF3B2-214ENST00000533595 APLP1P51693 650 aa17.63■□□□□ 0.41
SF3B2-214ENST00000533595 RHBDL3P58872 404 aa17.63■□□□□ 0.41
SF3B2-214ENST00000533595 FAM83AQ86UY5 434 aa17.63■□□□□ 0.41
SF3B2-214ENST00000533595 MIGA1Q8NAN2 632 aa17.63■□□□□ 0.41
SF3B2-214ENST00000533595 EVI5LQ96CN4 794 aa17.63■□□□□ 0.41
SF3B2-214ENST00000533595 MYH7P12883 1935 aa17.62■□□□□ 0.41
SF3B2-214ENST00000533595 NFIAQ12857 509 aa17.62■□□□□ 0.41
SF3B2-214ENST00000533595 UBE3CQ15386 1083 aa17.62■□□□□ 0.41
SF3B2-214ENST00000533595 LRRFIP1Q32MZ4 808 aaKnown RBP17.62■□□□□ 0.41
SF3B2-214ENST00000533595 PRAMEF18Q5VWM3 479 aa17.62■□□□□ 0.41
SF3B2-214ENST00000533595 CERS3Q8IU89 383 aa17.62■□□□□ 0.41
SF3B2-214ENST00000533595 SH3RF3Q8TEJ3 882 aaPredicted RBP17.62■□□□□ 0.41
SF3B2-214ENST00000533595 FSD1Q9BTV5 496 aa17.62■□□□□ 0.41
SF3B2-214ENST00000533595 IDI2Q9BXS1 227 aa17.62■□□□□ 0.41
SF3B2-214ENST00000533595 ZNF408Q9H9D4 720 aa17.62■□□□□ 0.41
SF3B2-214ENST00000533595 CNTNAP1P78357 1384 aa17.62■□□□□ 0.41
SF3B2-214ENST00000533595 TRPM7Q96QT4 1865 aa17.61■□□□□ 0.41
SF3B2-214ENST00000533595 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
SF3B2-214ENST00000533595 TRIM6-TRIM34B2RNG4 842 aa17.61■□□□□ 0.41
SF3B2-214ENST00000533595 WDHD1O75717 1129 aaPredicted RBP17.61■□□□□ 0.41
SF3B2-214ENST00000533595 CELF2O95319 508 aaKnown RBP17.61■□□□□ 0.41
SF3B2-214ENST00000533595 ZFYP08048 801 aaPredicted RBP17.61■□□□□ 0.41
SF3B2-214ENST00000533595 HSPA6P17066 643 aa17.61■□□□□ 0.41
SF3B2-214ENST00000533595 DYNLL1P63167 89 aaKnown RBP17.61■□□□□ 0.41
SF3B2-214ENST00000533595 TEX11Q8IYF3 940 aa17.61■□□□□ 0.41
SF3B2-214ENST00000533595 TMEM39BQ9GZU3 492 aa17.61■□□□□ 0.41
SF3B2-214ENST00000533595 FAM198AQ9UFP1 575 aa17.61■□□□□ 0.41
SF3B2-214ENST00000533595 TMEM88BA6NKF7 163 aa17.6■□□□□ 0.41
SF3B2-214ENST00000533595 RNF113AO15541 343 aaKnown RBP17.6■□□□□ 0.41
SF3B2-214ENST00000533595 ENTPD3O75355 529 aa17.6■□□□□ 0.41
SF3B2-214ENST00000533595 NF2P35240 595 aa17.6■□□□□ 0.41
SF3B2-214ENST00000533595 RGS3P49796 1198 aa17.6■□□□□ 0.41
SF3B2-214ENST00000533595 TCP10Q12799 353 aa17.6■□□□□ 0.41
SF3B2-214ENST00000533595 SLFNL1Q499Z3 407 aa17.6■□□□□ 0.41
SF3B2-214ENST00000533595 CST9Q5W186 159 aa17.6■□□□□ 0.41
SF3B2-214ENST00000533595 FAM151AQ8WW52 585 aa17.6■□□□□ 0.41
SF3B2-214ENST00000533595 RFX7Q2KHR2 1363 aa17.6■□□□□ 0.41
SF3B2-214ENST00000533595 NPM3O75607 178 aaKnown RBP17.59■□□□□ 0.41
SF3B2-214ENST00000533595 CHGBP05060 677 aa17.59■□□□□ 0.41
SF3B2-214ENST00000533595 PICALMQ13492 652 aa17.59■□□□□ 0.41
SF3B2-214ENST00000533595 SUPT20HL1Q3ZLR7 823 aa17.59■□□□□ 0.41
SF3B2-214ENST00000533595 TTC22Q5TAA0 569 aa17.59■□□□□ 0.41
SF3B2-214ENST00000533595 RILPL2Q969X0 211 aa17.59■□□□□ 0.41
SF3B2-214ENST00000533595 TEPSINQ96N21 525 aa17.59■□□□□ 0.41
SF3B2-214ENST00000533595 RIOK1Q9BRS2 568 aaKnown RBP17.59■□□□□ 0.41
SF3B2-214ENST00000533595 DDX4Q9NQI0 724 aaKnown RBP17.59■□□□□ 0.41
SF3B2-214ENST00000533595 RPAP1Q9BWH6 1393 aaPredicted RBP17.58■□□□□ 0.4
SF3B2-214ENST00000533595 NBPF12Q5TAG4 269 aaPredicted RBP17.58■□□□□ 0.4
SF3B2-214ENST00000533595 TICAM2Q86XR7 235 aa17.58■□□□□ 0.4
SF3B2-214ENST00000533595 CREBZFQ9NS37 354 aa17.58■□□□□ 0.4
SF3B2-214ENST00000533595 MBD4O95243 580 aa17.57■□□□□ 0.4
SF3B2-214ENST00000533595 ZFPM1Q8IX07 1006 aa17.57■□□□□ 0.4
SF3B2-214ENST00000533595 C2orf69Q8N8R5 385 aa17.57■□□□□ 0.4
SF3B2-214ENST00000533595 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
SF3B2-214ENST00000533595 APPBP2Q92624 585 aa17.57■□□□□ 0.4
SF3B2-214ENST00000533595 AIDAQ96BJ3 306 aa17.57■□□□□ 0.4
SF3B2-214ENST00000533595 CRNKL1Q9BZJ0 848 aaKnown RBP17.57■□□□□ 0.4
SF3B2-214ENST00000533595 GBA2Q9HCG7 927 aaPredicted RBP17.57■□□□□ 0.4
SF3B2-214ENST00000533595 GSPT1P15170 499 aaKnown RBP17.56■□□□□ 0.4
SF3B2-214ENST00000533595 USP5P45974 858 aa17.56■□□□□ 0.4
SF3B2-214ENST00000533595 ZSCAN29Q8IWY8 852 aaPredicted RBP17.56■□□□□ 0.4
SF3B2-214ENST00000533595 CDAN1Q8IWY9 1227 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms