RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 APOBEC3FQ8IUX4 373 aaKnown RBP26.99■■□□□ 1.91
LRRK1-208ENST00000532029 KRT26Q7Z3Y9 468 aa26.98■■□□□ 1.91
LRRK1-208ENST00000532029 KBTBD3Q8NAB2 608 aa26.98■■□□□ 1.91
LRRK1-208ENST00000532029 MYH2Q9UKX2 1941 aa26.98■■□□□ 1.91
LRRK1-208ENST00000532029 GPR75-ASB3A0A0A6YYF3 556 aa26.97■■□□□ 1.91
LRRK1-208ENST00000532029 PDE6AP16499 860 aa26.97■■□□□ 1.91
LRRK1-208ENST00000532029 USP40Q9NVE5 1235 aa26.97■■□□□ 1.91
LRRK1-208ENST00000532029 MYO5AQ9Y4I1 1855 aaKnown RBP26.97■■□□□ 1.91
LRRK1-208ENST00000532029 ECM29Q5VYK3 1845 aa26.96■■□□□ 1.91
LRRK1-208ENST00000532029 BAG3O95817 575 aa26.96■■□□□ 1.91
LRRK1-208ENST00000532029 LRRFIP1Q32MZ4 808 aaKnown RBP26.96■■□□□ 1.91
LRRK1-208ENST00000532029 CDC42EP5Q6NZY7 148 aa26.96■■□□□ 1.91
LRRK1-208ENST00000532029 USP48Q86UV5 1035 aa26.96■■□□□ 1.91
LRRK1-208ENST00000532029 FSD1Q9BTV5 496 aa26.96■■□□□ 1.91
LRRK1-208ENST00000532029 GLIS2Q9BZE0 524 aaPredicted RBP26.96■■□□□ 1.91
LRRK1-208ENST00000532029 ZNF532Q9HCE3 1301 aa26.95■■□□□ 1.91
LRRK1-208ENST00000532029 TRIM6-TRIM34B2RNG4 842 aa26.95■■□□□ 1.9
LRRK1-208ENST00000532029 TNFAIP1Q13829 316 aa26.95■■□□□ 1.9
LRRK1-208ENST00000532029 EVI5LQ96CN4 794 aa26.95■■□□□ 1.9
LRRK1-208ENST00000532029 ADM5C9JUS6 153 aa26.94■■□□□ 1.9
LRRK1-208ENST00000532029 ADD2P35612 726 aa26.94■■□□□ 1.9
LRRK1-208ENST00000532029 ADGRA1Q86SQ6 560 aa26.94■■□□□ 1.9
LRRK1-208ENST00000532029 AATFQ9NY61 560 aaKnown RBP eCLIP26.94■■□□□ 1.9
LRRK1-208ENST00000532029 TCP10L2B9ZVM9 353 aa26.93■■□□□ 1.9
LRRK1-208ENST00000532029 PLCG2P16885 1265 aa26.93■■□□□ 1.9
LRRK1-208ENST00000532029 TNNI2P48788 182 aa26.93■■□□□ 1.9
LRRK1-208ENST00000532029 SCAF8Q9UPN6 1271 aaKnown RBP26.93■■□□□ 1.9
LRRK1-208ENST00000532029 ITGBL1O95965 494 aaPredicted RBP26.92■■□□□ 1.9
LRRK1-208ENST00000532029 CACNB3P54284 484 aa26.92■■□□□ 1.9
LRRK1-208ENST00000532029 UBE3CQ15386 1083 aa26.92■■□□□ 1.9
LRRK1-208ENST00000532029 MIGA1Q8NAN2 632 aa26.92■■□□□ 1.9
LRRK1-208ENST00000532029 RILPL2Q969X0 211 aa26.92■■□□□ 1.9
LRRK1-208ENST00000532029 TCRBV5S4A2TA0A5A2 114 aa26.91■■□□□ 1.9
LRRK1-208ENST00000532029 RNF113AO15541 343 aaKnown RBP26.91■■□□□ 1.9
LRRK1-208ENST00000532029 ZFYP08048 801 aaPredicted RBP26.91■■□□□ 1.9
LRRK1-208ENST00000532029 PPP4CP60510 307 aa26.91■■□□□ 1.9
LRRK1-208ENST00000532029 TTC22Q5TAA0 569 aa26.91■■□□□ 1.9
LRRK1-208ENST00000532029 FKBP1CQ5VVH2 108 aa26.91■■□□□ 1.9
LRRK1-208ENST00000532029 CERS3Q8IU89 383 aa26.91■■□□□ 1.9
LRRK1-208ENST00000532029 DEFB129Q9H1M3 183 aa26.91■■□□□ 1.9
LRRK1-208ENST00000532029 TRAF5O00463 557 aa26.9■■□□□ 1.9
LRRK1-208ENST00000532029 RHBDL3P58872 404 aa26.9■■□□□ 1.9
LRRK1-208ENST00000532029 PPP2R3BQ9Y5P8 575 aa26.9■■□□□ 1.9
LRRK1-208ENST00000532029 MAGEB6P1A0A0J9YX57 407 aa26.89■■□□□ 1.9
LRRK1-208ENST00000532029 DYNLL1P63167 89 aaKnown RBP26.89■■□□□ 1.9
LRRK1-208ENST00000532029 RASA3Q14644 834 aa26.89■■□□□ 1.9
LRRK1-208ENST00000532029 TEX11Q8IYF3 940 aa26.89■■□□□ 1.9
LRRK1-208ENST00000532029 HSPA6P17066 643 aa26.88■■□□□ 1.89
LRRK1-208ENST00000532029 RGS3P49796 1198 aa26.88■■□□□ 1.89
LRRK1-208ENST00000532029 SH3RF3Q8TEJ3 882 aaPredicted RBP26.88■■□□□ 1.89
LRRK1-208ENST00000532029 CDCA5Q96FF9 252 aa26.88■■□□□ 1.89
LRRK1-208ENST00000532029 IDI2Q9BXS1 227 aa26.88■■□□□ 1.89
LRRK1-208ENST00000532029 MYH7P12883 1935 aa26.88■■□□□ 1.89
LRRK1-208ENST00000532029 CHGBP05060 677 aa26.87■■□□□ 1.89
LRRK1-208ENST00000532029 SLFNL1Q499Z3 407 aa26.87■■□□□ 1.89
LRRK1-208ENST00000532029 FAM83AQ86UY5 434 aa26.87■■□□□ 1.89
LRRK1-208ENST00000532029 SKAP1Q86WV1 359 aa26.87■■□□□ 1.89
LRRK1-208ENST00000532029 APPBP2Q92624 585 aa26.87■■□□□ 1.89
LRRK1-208ENST00000532029 PASKQ96RG2 1323 aa26.87■■□□□ 1.89
LRRK1-208ENST00000532029 POLR2AP24928 1970 aaKnown RBP26.86■■□□□ 1.89
LRRK1-208ENST00000532029 NFIAQ12857 509 aa26.86■■□□□ 1.89
LRRK1-208ENST00000532029 PICALMQ13492 652 aa26.86■■□□□ 1.89
LRRK1-208ENST00000532029 DLK2Q6UY11 383 aa26.86■■□□□ 1.89
LRRK1-208ENST00000532029 TICAM2Q86XR7 235 aa26.86■■□□□ 1.89
LRRK1-208ENST00000532029 ZNF408Q9H9D4 720 aa26.86■■□□□ 1.89
LRRK1-208ENST00000532029 RFX7Q2KHR2 1363 aa26.85■■□□□ 1.89
LRRK1-208ENST00000532029 WDHD1O75717 1129 aaPredicted RBP26.85■■□□□ 1.89
LRRK1-208ENST00000532029 GSPT1P15170 499 aaKnown RBP26.85■■□□□ 1.89
LRRK1-208ENST00000532029 FMR1Q06787 632 aaKnown RBP eCLIP26.85■■□□□ 1.89
LRRK1-208ENST00000532029 TCP10Q12799 353 aa26.85■■□□□ 1.89
LRRK1-208ENST00000532029 PRAMEF18Q5VWM3 479 aa26.85■■□□□ 1.89
LRRK1-208ENST00000532029 FAM151AQ8WW52 585 aa26.85■■□□□ 1.89
LRRK1-208ENST00000532029 RIOK1Q9BRS2 568 aaKnown RBP26.85■■□□□ 1.89
LRRK1-208ENST00000532029 CNTNAP1P78357 1384 aa26.84■■□□□ 1.89
LRRK1-208ENST00000532029 ENTPD3O75355 529 aa26.84■■□□□ 1.89
LRRK1-208ENST00000532029 MBD4O95243 580 aa26.84■■□□□ 1.89
LRRK1-208ENST00000532029 NF2P35240 595 aa26.84■■□□□ 1.89
LRRK1-208ENST00000532029 AIDAQ96BJ3 306 aa26.84■■□□□ 1.89
LRRK1-208ENST00000532029 TMEM39BQ9GZU3 492 aa26.84■■□□□ 1.89
LRRK1-208ENST00000532029 FAM198AQ9UFP1 575 aa26.84■■□□□ 1.89
LRRK1-208ENST00000532029 CELF2O95319 508 aaKnown RBP26.83■■□□□ 1.89
LRRK1-208ENST00000532029 CRNKL1Q9BZJ0 848 aaKnown RBP26.83■■□□□ 1.89
LRRK1-208ENST00000532029 ARMT1Q9H993 441 aa26.83■■□□□ 1.89
LRRK1-208ENST00000532029 NPM3O75607 178 aaKnown RBP26.82■■□□□ 1.88
LRRK1-208ENST00000532029 SDSP20132 328 aa26.82■■□□□ 1.88
LRRK1-208ENST00000532029 USP5P45974 858 aa26.82■■□□□ 1.88
LRRK1-208ENST00000532029 SUPT20HL1Q3ZLR7 823 aa26.82■■□□□ 1.88
LRRK1-208ENST00000532029 LCORLQ8N3X6 602 aa26.82■■□□□ 1.88
LRRK1-208ENST00000532029 TGFBRAP1Q8WUH2 860 aa26.82■■□□□ 1.88
LRRK1-208ENST00000532029 PUS7LQ9H0K6 701 aaKnown RBP26.82■■□□□ 1.88
LRRK1-208ENST00000532029 DDX4Q9NQI0 724 aaKnown RBP26.82■■□□□ 1.88
LRRK1-208ENST00000532029 ZMYM1Q5SVZ6 1142 aa26.81■■□□□ 1.88
LRRK1-208ENST00000532029 ZSCAN29Q8IWY8 852 aaPredicted RBP26.81■■□□□ 1.88
LRRK1-208ENST00000532029 OSBP2Q969R2 916 aa26.81■■□□□ 1.88
LRRK1-208ENST00000532029 RPAP1Q9BWH6 1393 aaPredicted RBP26.81■■□□□ 1.88
LRRK1-208ENST00000532029 HIP1O00291 1037 aa26.8■■□□□ 1.88
LRRK1-208ENST00000532029 APLP1P51693 650 aa26.8■■□□□ 1.88
LRRK1-208ENST00000532029 MAPKAPK5Q8IW41 473 aa26.8■■□□□ 1.88
LRRK1-208ENST00000532029 DIAPH3Q9NSV4 1193 aa26.8■■□□□ 1.88
LRRK1-208ENST00000532029 NBPF12Q5TAG4 269 aaPredicted RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms