RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 CFAP45Q9UL16 551 aa11.35□□□□□ -0.59
NPIPA3-202ENST00000531598 SUGT1Q9Y2Z0 365 aa11.35□□□□□ -0.59
NPIPA3-202ENST00000531598 PARP3Q9Y6F1 533 aa11.35□□□□□ -0.59
NPIPA3-202ENST00000531598 TAF6LQ9Y6J9 622 aa11.35□□□□□ -0.59
NPIPA3-202ENST00000531598 VPS37CA5D8V6 355 aaPredicted RBP11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 PLCG2P16885 1265 aa11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 ZNF445P59923 1031 aa11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 SCRN1Q12765 414 aa11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 DZIP1Q86YF9 867 aaKnown RBP11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 WASF1Q92558 559 aa11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 NSUN4Q96CB9 384 aaKnown RBP11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 ARMT1Q9H993 441 aa11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 ARPP21Q9UBL0 812 aaPredicted RBP11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 IRS2Q9Y4H2 1338 aa11.34□□□□□ -0.59
NPIPA3-202ENST00000531598 NID2Q14112 1375 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 TIAM2Q8IVF5 1701 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 KLF18A0A0U1RQI7 1052 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 FSD2A1L4K1 749 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 GOLGA8BA8MQT2 603 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 SH2B2O14492 632 aaPredicted RBP11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 IL1R1P14778 569 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 HAND2P61296 217 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 ST3GAL1Q11201 340 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 SLFNL1Q499Z3 407 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 SBK1Q52WX2 424 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 AMIGO3Q86WK7 504 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 PROM2Q8N271 834 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 LCORLQ8N3X6 602 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 NSUN7Q8NE18 718 aaKnown RBP11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 ZNF396Q96N95 335 aaPredicted RBP11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 RIOK1Q9BRS2 568 aaKnown RBP11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 ZNF287Q9HBT7 754 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 TAOK2Q9UL54 1235 aa11.33□□□□□ -0.6
NPIPA3-202ENST00000531598 CCDC69A6NI79 296 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 SNAP23O00161 211 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 CALM1P0DP23 149 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 CALM2P0DP24 149 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 CALM3P0DP25 149 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 METAP2P50579 478 aaKnown RBP eCLIP11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 PPP4CP60510 307 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 MECOMQ03112 1051 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 PPARAQ07869 468 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 STK3Q13188 491 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 TMEM67Q5HYA8 995 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 ANP32BQ92688 251 aaKnown RBP11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 TCEANC2Q96MN5 208 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 EYA3Q99504 573 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 EPB41L4AQ9HCS5 686 aaPredicted RBP11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 RTN4Q9NQC3 1192 aaKnown RBP11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 STK36Q9NRP7 1315 aa11.32□□□□□ -0.6
NPIPA3-202ENST00000531598 A0A1B0GUL6 1792 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 BRWD3Q6RI45 1802 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 PPEF1O14829 653 aaPredicted RBP11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 IFIT3O14879 490 aaKnown RBP11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 ZBTB43O43298 467 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 UFL1O94874 794 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 FGRP09769 529 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 PDE4BQ07343 736 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 DDR1Q08345 913 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 CC2D2BQ6DHV5 1058 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 NFXL1Q6ZNB6 911 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 BRAPQ7Z569 592 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 IQCA1Q86XH1 822 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 TBC1D10CQ8IV04 446 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 MASTLQ96GX5 879 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 UBAC1Q9BSL1 405 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 STK32BQ9NY57 414 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 NSFL1CQ9UNZ2 370 aaKnown RBP11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 SLC12A7Q9Y666 1083 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 MAST2Q6P0Q8 1798 aa11.31□□□□□ -0.6
NPIPA3-202ENST00000531598 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 TNRC6CQ9HCJ0 1690 aaKnown RBP11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 GOLGA6L4A6NEF3 574 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 ORC4O43929 436 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 ANTXR2P58335 489 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 GPSM2P81274 684 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 CHAF1AQ13111 956 aaPredicted RBP11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 WTAPQ15007 396 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 STYK1Q6J9G0 422 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 SMIM5Q71RC9 77 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 USP48Q86UV5 1035 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 COL23A1Q86Y22 540 aaPredicted RBP11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 LRRC2Q9BYS8 371 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 CD209Q9NNX6 404 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 COL1A1P02452 1464 aaPredicted RBP11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 FAM205AQ6ZU69 1335 aa11.3□□□□□ -0.6
NPIPA3-202ENST00000531598 B4E1Z4 1266 aa11.29□□□□□ -0.6
NPIPA3-202ENST00000531598 SRGNP10124 158 aa11.29□□□□□ -0.6
NPIPA3-202ENST00000531598 SF3B2Q13435 895 aaKnown RBP11.29□□□□□ -0.6
NPIPA3-202ENST00000531598 TRIM29Q14134 588 aa11.29□□□□□ -0.6
NPIPA3-202ENST00000531598 CCDC183Q5T5S1 534 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms