RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 KDM5AP29375 1690 aaKnown RBP17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 OGFOD1Q8N543 542 aa17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 CCDC114Q96M63 670 aa17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 HEATR3Q7Z4Q2 680 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 METTL22Q9BUU2 404 aaPredicted RBP17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 KCNH3Q9ULD8 1083 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 ATP6V1AP38606 617 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 CDC37L1Q7L3B6 337 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 CPLX4Q7Z7G2 160 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 DZIP3Q86Y13 1208 aaKnown RBP17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 NEK11Q8NG66 645 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 GCP02774 474 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 TNNC1P63316 161 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 CCDC77Q9BR77 488 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 A0A1W2PRG0 241 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 IRS4O14654 1257 aaPredicted RBP17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 GSPT1P15170 499 aaKnown RBP17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 NLRP12P59046 1061 aa17.39■□□□□ 0.37
PCDHA4-203ENST00000530339 IFT81Q8WYA0 676 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 PTPRTO14522 1441 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 ACTN2P35609 894 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 PARP10Q53GL7 1025 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 MLKLQ8NB16 471 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 KDM5DQ9BY66 1539 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 B4DLN1 442 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 EYA2O00167 538 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 MYCNP04198 464 aaPredicted RBP17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 MRPL12P52815 198 aaKnown RBP17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 ZBTB9Q96C00 473 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 TTC14Q96N46 770 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 DENND2AQ9ULE3 1009 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 NIP7Q9Y221 180 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 A6NNZ2 444 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 TUBB8Q3ZCM7 444 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 NFATC2IPQ8NCF5 419 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 TSC1Q92574 1164 aa17.38■□□□□ 0.37
PCDHA4-203ENST00000530339 TPTE2Q6XPS3 522 aa17.37■□□□□ 0.37
PCDHA4-203ENST00000530339 B4GALNT4Q76KP1 1039 aa17.37■□□□□ 0.37
PCDHA4-203ENST00000530339 GPT2Q8TD30 523 aa17.37■□□□□ 0.37
PCDHA4-203ENST00000530339 STK24Q9Y6E0 443 aa17.37■□□□□ 0.37
PCDHA4-203ENST00000530339 PNMA6EA0A0J9YXQ4 647 aa17.37■□□□□ 0.37
PCDHA4-203ENST00000530339 ZNF202O95125 648 aa17.37■□□□□ 0.37
PCDHA4-203ENST00000530339 DDB1Q16531 1140 aa17.37■□□□□ 0.37
PCDHA4-203ENST00000530339 PLCD1P51178 756 aa17.37■□□□□ 0.37
PCDHA4-203ENST00000530339 FAM227BQ96M60 508 aa17.37■□□□□ 0.37
PCDHA4-203ENST00000530339 ABCC4O15439 1325 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 CYP26C1Q6V0L0 522 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 DTHD1Q6ZMT9 781 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 GLT8D2Q9H1C3 349 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 ATP10AO60312 1499 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 CUTAO60888 179 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 DEXIO95424 95 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 RXRAP19793 462 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 CCDC6Q16204 474 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 CCT6AP40227 531 aaKnown RBP17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 TNNI3KQ59H18 835 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 GBP6Q6ZN66 633 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 FPGT-TNNI3KV9GXZ4 949 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 ARID5AQ03989 594 aa17.36■□□□□ 0.37
PCDHA4-203ENST00000530339 SAMM50Q9Y512 469 aa17.35■□□□□ 0.37
PCDHA4-203ENST00000530339 IKBKGQ9Y6K9 419 aa17.35■□□□□ 0.37
PCDHA4-203ENST00000530339 PKP1Q13835 747 aa17.35■□□□□ 0.37
PCDHA4-203ENST00000530339 TRMT2AQ8IZ69 625 aaKnown RBP17.35■□□□□ 0.37
PCDHA4-203ENST00000530339 HOMER2Q9NSB8 354 aa17.35■□□□□ 0.37
PCDHA4-203ENST00000530339 OAS2P29728 719 aaKnown RBP17.35■□□□□ 0.37
PCDHA4-203ENST00000530339 MAGEB6Q8N7X4 407 aa17.35■□□□□ 0.37
PCDHA4-203ENST00000530339 SELENOSQ9BQE4 189 aa17.35■□□□□ 0.37
PCDHA4-203ENST00000530339 NCOA5Q9HCD5 579 aaKnown RBP17.35■□□□□ 0.37
PCDHA4-203ENST00000530339 TMTC1Q8IUR5 882 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 APPBP2Q92624 585 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 C8orf37Q96NL8 207 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 ANTXR1Q9H6X2 564 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 NDUFAB1O14561 156 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 MCM7P33993 719 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 SMARCC2Q8TAQ2 1214 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 IBTKQ9P2D0 1353 aaPredicted RBP17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 NFE2L3Q9Y4A8 694 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 PPM1EQ8WY54 764 aa17.34■□□□□ 0.37
PCDHA4-203ENST00000530339 RPL13P26373 211 aaKnown RBP17.33■□□□□ 0.37
PCDHA4-203ENST00000530339 ZNF790Q6PG37 636 aa17.33■□□□□ 0.37
PCDHA4-203ENST00000530339 HS2ST1Q7LGA3 356 aa17.33■□□□□ 0.37
PCDHA4-203ENST00000530339 VWA3AA6NCI4 1184 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 GOLGA6CA6NDK9 693 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 GOLGA6DP0CG33 693 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 TBC1D8BQ0IIM8 1120 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 JDP2Q8WYK2 163 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 VPS16Q9H269 839 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 GOLGA6AQ9NYA3 693 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 SAMD15Q9P1V8 674 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 SPDYE3A6NKU9 549 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 SLC4A8Q2Y0W8 1093 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 VWA3BQ502W6 1294 aa17.33■□□□□ 0.36
PCDHA4-203ENST00000530339 GPR161Q8N6U8 529 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms