RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 UBE3CQ15386 1083 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 KRT40Q6A162 431 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 PHKBQ93100 1093 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 SENP2Q9HC62 589 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 ZNF532Q9HCE3 1301 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 TAOK2Q9UL54 1235 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 ATRNO75882 1429 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 B4E1Z4 1266 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 CTSWP56202 376 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 EVA1CP58658 441 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 ISM2Q6H9L7 571 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 APOA5Q6Q788 366 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 TMC6Q7Z403 805 aa22.54■■□□□ 1.2
PCF11-203ENST00000530304 SYKP43405 635 aa22.53■■□□□ 1.2
PCF11-203ENST00000530304 TIGD1Q96MW7 591 aa22.53■■□□□ 1.2
PCF11-203ENST00000530304 ARMCX5Q6P1M9 558 aa22.53■■□□□ 1.2
PCF11-203ENST00000530304 MICU3Q86XE3 530 aa22.53■■□□□ 1.2
PCF11-203ENST00000530304 BCL11BQ9C0K0 894 aaPredicted RBP22.53■■□□□ 1.2
PCF11-203ENST00000530304 PPP6R2O75170 966 aa22.52■■□□□ 1.2
PCF11-203ENST00000530304 PDE8BO95263 885 aa22.52■■□□□ 1.2
PCF11-203ENST00000530304 FEZ1Q99689 392 aa22.52■■□□□ 1.2
PCF11-203ENST00000530304 MYO5AQ9Y4I1 1855 aaKnown RBP22.52■■□□□ 1.2
PCF11-203ENST00000530304 CCDC102BQ68D86 513 aa22.52■■□□□ 1.2
PCF11-203ENST00000530304 CPLX2Q6PUV4 134 aaKnown RBP22.52■■□□□ 1.2
PCF11-203ENST00000530304 CCDC150Q8NCX0 1101 aa22.52■■□□□ 1.2
PCF11-203ENST00000530304 IGDCC4Q8TDY8 1250 aa22.52■■□□□ 1.2
PCF11-203ENST00000530304 CGNQ9P2M7 1197 aaKnown RBP22.52■■□□□ 1.2
PCF11-203ENST00000530304 HPSEQ9Y251 543 aa22.52■■□□□ 1.2
PCF11-203ENST00000530304 IRS4O14654 1257 aaPredicted RBP22.51■■□□□ 1.19
PCF11-203ENST00000530304 PDE6AP16499 860 aa22.51■■□□□ 1.19
PCF11-203ENST00000530304 PHKA1P46020 1223 aa22.51■■□□□ 1.19
PCF11-203ENST00000530304 GNL2Q13823 731 aaKnown RBP22.51■■□□□ 1.19
PCF11-203ENST00000530304 PTPAQ15257 358 aa22.51■■□□□ 1.19
PCF11-203ENST00000530304 E4F1Q66K89 784 aaPredicted RBP22.51■■□□□ 1.19
PCF11-203ENST00000530304 SHC4Q6S5L8 630 aa22.51■■□□□ 1.19
PCF11-203ENST00000530304 TMEM87BQ96K49 555 aa22.51■■□□□ 1.19
PCF11-203ENST00000530304 WWC3Q9ULE0 1092 aa22.51■■□□□ 1.19
PCF11-203ENST00000530304 LMOD1P29536 600 aaPredicted RBP22.51■■□□□ 1.19
PCF11-203ENST00000530304 KIF18AQ8NI77 898 aa22.51■■□□□ 1.19
PCF11-203ENST00000530304 MAP3K14Q99558 947 aa22.51■■□□□ 1.19
PCF11-203ENST00000530304 ZNF215Q9UL58 517 aaPredicted RBP22.51■■□□□ 1.19
PCF11-203ENST00000530304 TBC1D2BQ9UPU7 963 aa22.51■■□□□ 1.19
PCF11-203ENST00000530304 TCRBV5S4A2TA0A5A2 114 aa22.5■■□□□ 1.19
PCF11-203ENST00000530304 IKBKBO14920 756 aa22.5■■□□□ 1.19
PCF11-203ENST00000530304 ZBTB43O43298 467 aa22.5■■□□□ 1.19
PCF11-203ENST00000530304 NTRK3Q16288 839 aa22.5■■□□□ 1.19
PCF11-203ENST00000530304 JMYQ8N9B5 988 aa22.5■■□□□ 1.19
PCF11-203ENST00000530304 TUBE1Q9UJT0 475 aa22.5■■□□□ 1.19
PCF11-203ENST00000530304 SOS2Q07890 1332 aaPredicted RBP22.5■■□□□ 1.19
PCF11-203ENST00000530304 SFPQP23246 707 aaKnown RBP eCLIP22.5■■□□□ 1.19
PCF11-203ENST00000530304 DMTNQ08495 405 aa22.5■■□□□ 1.19
PCF11-203ENST00000530304 STRBPQ96SI9 672 aaKnown RBP22.5■■□□□ 1.19
PCF11-203ENST00000530304 INCENPQ9NQS7 918 aa22.5■■□□□ 1.19
PCF11-203ENST00000530304 IARSP41252 1262 aaKnown RBP22.49■■□□□ 1.19
PCF11-203ENST00000530304 FANCCQ00597 558 aa22.49■■□□□ 1.19
PCF11-203ENST00000530304 NFXL1Q6ZNB6 911 aa22.49■■□□□ 1.19
PCF11-203ENST00000530304 HSD3B7Q9H2F3 369 aa22.49■■□□□ 1.19
PCF11-203ENST00000530304 LY9Q9HBG7 655 aa22.49■■□□□ 1.19
PCF11-203ENST00000530304 TRMT112Q9UI30 125 aaKnown RBP22.49■■□□□ 1.19
PCF11-203ENST00000530304 ARID4AP29374 1257 aaPredicted RBP22.49■■□□□ 1.19
PCF11-203ENST00000530304 AIDAQ96BJ3 306 aa22.49■■□□□ 1.19
PCF11-203ENST00000530304 FAM217BQ9NTX9 383 aaPredicted RBP22.49■■□□□ 1.19
PCF11-203ENST00000530304 KIF2AO00139 706 aaPredicted RBP22.48■■□□□ 1.19
PCF11-203ENST00000530304 RANBP6O60518 1105 aaKnown RBP22.48■■□□□ 1.19
PCF11-203ENST00000530304 MYL10Q9BUA6 226 aa22.48■■□□□ 1.19
PCF11-203ENST00000530304 ATP1A3P13637 1013 aa22.48■■□□□ 1.19
PCF11-203ENST00000530304 SGMS1Q86VZ5 419 aa22.48■■□□□ 1.19
PCF11-203ENST00000530304 CLIC6Q96NY7 704 aa22.48■■□□□ 1.19
PCF11-203ENST00000530304 FAM237AA0A1B0GTK4 181 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 GOLGA8AA7E2F4 631 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 UQCRFS1P1P0C7P4 283 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 PNOCQ13519 176 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 TRIM29Q14134 588 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 TMEM67Q5HYA8 995 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 RESP18Q5W5W9 173 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 PPP1R13BQ96KQ4 1090 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 OGFRQ9NZT2 677 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 UBE2Q2LH0YL09 131 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 UTP14CQ5TAP6 766 aaKnown RBP22.47■■□□□ 1.19
PCF11-203ENST00000530304 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.47■■□□□ 1.19
PCF11-203ENST00000530304 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.47■■□□□ 1.19
PCF11-203ENST00000530304 UBN2Q6ZU65 1347 aa22.47■■□□□ 1.19
PCF11-203ENST00000530304 MYH3P11055 1940 aa22.46■■□□□ 1.19
PCF11-203ENST00000530304 PSDA5PKW4 1024 aaPredicted RBP22.46■■□□□ 1.19
PCF11-203ENST00000530304 PATL2C9JE40 543 aaKnown RBP22.46■■□□□ 1.19
PCF11-203ENST00000530304 PDE8AO60658 829 aa22.46■■□□□ 1.19
PCF11-203ENST00000530304 DHX8Q14562 1220 aaKnown RBP22.46■■□□□ 1.19
PCF11-203ENST00000530304 ALX1Q15699 326 aa22.46■■□□□ 1.19
PCF11-203ENST00000530304 HELBQ8NG08 1087 aaPredicted RBP22.46■■□□□ 1.19
PCF11-203ENST00000530304 ZSWIM5Q9P217 1185 aa22.46■■□□□ 1.19
PCF11-203ENST00000530304 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.46■■□□□ 1.19
PCF11-203ENST00000530304 V9GYY5 206 aaPredicted RBP22.46■■□□□ 1.19
PCF11-203ENST00000530304 IFNL3Q8IZI9 196 aa22.45■■□□□ 1.19
PCF11-203ENST00000530304 ERO1AQ96HE7 468 aa22.45■■□□□ 1.19
PCF11-203ENST00000530304 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.19
PCF11-203ENST00000530304 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
PCF11-203ENST00000530304 LIFRP42702 1097 aa22.45■■□□□ 1.18
PCF11-203ENST00000530304 KCNJ6P48051 423 aa22.45■■□□□ 1.18
PCF11-203ENST00000530304 CTDSPL2Q05D32 466 aa22.45■■□□□ 1.18
PCF11-203ENST00000530304 PUM3Q15397 648 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms