RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 ANKRD33BA6NCL7 494 aa8.47□□□□□ -1.05
USP47-209ENST00000530041 TGFB1P01137 390 aa8.47□□□□□ -1.05
USP47-209ENST00000530041 LIG1P18858 919 aa8.47□□□□□ -1.05
USP47-209ENST00000530041 HNRNPUQ00839 825 aaKnown RBP eCLIP8.47□□□□□ -1.05
USP47-209ENST00000530041 SULF2Q8IWU5 870 aa8.47□□□□□ -1.05
USP47-209ENST00000530041 SHKBP1Q8TBC3 707 aa8.47□□□□□ -1.05
USP47-209ENST00000530041 WDR89Q96FK6 387 aaPredicted RBP8.47□□□□□ -1.05
USP47-209ENST00000530041 MFSD14AQ96MC6 490 aa8.47□□□□□ -1.05
USP47-209ENST00000530041 FRMD6Q96NE9 622 aa8.47□□□□□ -1.05
USP47-209ENST00000530041 NECAB3Q96P71 396 aaPredicted RBP8.47□□□□□ -1.05
USP47-209ENST00000530041 C12orf49Q9H741 205 aa8.47□□□□□ -1.05
USP47-209ENST00000530041 FAM105AQ9NUU6 356 aa8.47□□□□□ -1.05
USP47-209ENST00000530041 PRR19A6NJB7 356 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 ZNF862O60290 1169 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 SLFN14P0C7P3 912 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 NME2P22392 152 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 ARNTP27540 789 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 ASPAP45381 313 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 CD97P48960 835 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 STK35Q8TDR2 534 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 ANKRD24Q8TF21 1146 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 CEP44Q9C0F1 390 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 ACSS3Q9H6R3 686 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 PPP1R9AQ9ULJ8 1098 aa8.46□□□□□ -1.06
USP47-209ENST00000530041 WDR64B1ANS9 1081 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 TMPRSS2O15393 492 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 COBLO75128 1261 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 PRPF40AO75400 957 aaKnown RBP8.45□□□□□ -1.06
USP47-209ENST00000530041 SSTR4P31391 388 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 FGD1P98174 961 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 MAP7Q14244 749 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 KIF4BQ2VIQ3 1234 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 TPTE2Q6XPS3 522 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 GIMAP7Q8NHV1 300 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 KCNB2Q92953 911 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 EMILIN2Q9BXX0 1053 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 SEMA6CQ9H3T2 930 aa8.45□□□□□ -1.06
USP47-209ENST00000530041 NFICP08651 508 aa8.44□□□□□ -1.06
USP47-209ENST00000530041 RAB6AP20340 208 aa8.44□□□□□ -1.06
USP47-209ENST00000530041 CRIM1Q9NZV1 1036 aa8.44□□□□□ -1.06
USP47-209ENST00000530041 PRKAG2Q9UGJ0 569 aa8.44□□□□□ -1.06
USP47-209ENST00000530041 ENC1O14682 589 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 F13BP05160 661 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 USP17L7P0C7H9 530 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 GNA15P30679 374 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 GRIK1P39086 918 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 ID3Q02535 119 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 ZNF252P-AS1Q0IIN9 211 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 EAPPQ56P03 285 aaPredicted RBP8.43□□□□□ -1.06
USP47-209ENST00000530041 INTS5Q6P9B9 1019 aaKnown RBP8.43□□□□□ -1.06
USP47-209ENST00000530041 DNAJC14Q6Y2X3 702 aaPredicted RBP8.43□□□□□ -1.06
USP47-209ENST00000530041 NBPF11Q86T75 865 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 FBXL6Q8N531 539 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 ATG3Q9NT62 314 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 PCMTD2Q9NV79 361 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 SAMM50Q9Y512 469 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 PCDHGC5Q9Y5F6 944 aa8.43□□□□□ -1.06
USP47-209ENST00000530041 KIAA1324LA8MWY0 1029 aaPredicted RBP8.42□□□□□ -1.06
USP47-209ENST00000530041 MED26O95402 600 aa8.42□□□□□ -1.06
USP47-209ENST00000530041 CPSF6Q16630 551 aaKnown RBP eCLIP8.42□□□□□ -1.06
USP47-209ENST00000530041 MAP1SQ66K74 1059 aaPredicted RBP8.42□□□□□ -1.06
USP47-209ENST00000530041 ZAR1Q86SH2 424 aa8.42□□□□□ -1.06
USP47-209ENST00000530041 TBC1D32Q96NH3 1257 aa8.42□□□□□ -1.06
USP47-209ENST00000530041 FANCD2OSQ96PS1 177 aa8.42□□□□□ -1.06
USP47-209ENST00000530041 ATXN3LQ9H3M9 355 aa8.42□□□□□ -1.06
USP47-209ENST00000530041 FBXO24O75426 580 aa8.41□□□□□ -1.06
USP47-209ENST00000530041 PAGE1O75459 146 aa8.41□□□□□ -1.06
USP47-209ENST00000530041 BMP6P22004 513 aa8.41□□□□□ -1.06
USP47-209ENST00000530041 EIF4BP23588 611 aaKnown RBP8.41□□□□□ -1.06
USP47-209ENST00000530041 NPAS4Q8IUM7 802 aa8.41□□□□□ -1.06
USP47-209ENST00000530041 OSBPL1AQ9BXW6 950 aa8.41□□□□□ -1.06
USP47-209ENST00000530041 CBX8Q9HC52 389 aa8.41□□□□□ -1.06
USP47-209ENST00000530041 CACNA2D2Q9NY47 1150 aa8.41□□□□□ -1.06
USP47-209ENST00000530041 ADMP35318 185 aa8.4□□□□□ -1.06
USP47-209ENST00000530041 SEZ6L2Q6UXD5 910 aa8.4□□□□□ -1.06
USP47-209ENST00000530041 SHISA5Q8N114 240 aa8.4□□□□□ -1.06
USP47-209ENST00000530041 GATA6Q92908 595 aa8.4□□□□□ -1.06
USP47-209ENST00000530041 DUSP9Q99956 384 aaKnown RBP8.4□□□□□ -1.06
USP47-209ENST00000530041 METTL22Q9BUU2 404 aaPredicted RBP8.4□□□□□ -1.06
USP47-209ENST00000530041 PIDD1Q9HB75 910 aa8.4□□□□□ -1.06
USP47-209ENST00000530041 DISC1Q9NRI5 854 aa8.4□□□□□ -1.06
USP47-209ENST00000530041 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
USP47-209ENST00000530041 LEMD3Q9Y2U8 911 aa8.4□□□□□ -1.06
USP47-209ENST00000530041 DAGLAQ9Y4D2 1042 aa8.4□□□□□ -1.06
USP47-209ENST00000530041 AK5Q9Y6K8 562 aa8.4□□□□□ -1.06
USP47-209ENST00000530041 GPBAR1Q8TDU6 330 aa8.39□□□□□ -1.07
USP47-209ENST00000530041 C1GALT1Q9NS00 363 aa8.39□□□□□ -1.07
USP47-209ENST00000530041 TRIM37O94972 964 aa8.38□□□□□ -1.07
USP47-209ENST00000530041 CELA3AP09093 270 aa8.38□□□□□ -1.07
USP47-209ENST00000530041 LRRC14Q15048 493 aa8.38□□□□□ -1.07
USP47-209ENST00000530041 ZC3H12AQ5D1E8 599 aaKnown RBP8.38□□□□□ -1.07
USP47-209ENST00000530041 SCARA3Q6AZY7 606 aa8.38□□□□□ -1.07
USP47-209ENST00000530041 SV2BQ7L1I2 683 aa8.38□□□□□ -1.07
USP47-209ENST00000530041 GRIN3AQ8TCU5 1115 aa8.38□□□□□ -1.07
USP47-209ENST00000530041 ACSBG1Q96GR2 724 aa8.38□□□□□ -1.07
USP47-209ENST00000530041 GZF1Q9H116 711 aaPredicted RBP8.38□□□□□ -1.07
USP47-209ENST00000530041 RNF19AQ9NV58 838 aa8.38□□□□□ -1.07
USP47-209ENST00000530041 DYNC1LI2O43237 492 aaPredicted RBP8.37□□□□□ -1.07
USP47-209ENST00000530041 SPINK2P20155 84 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms