RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 APOBRQ0VD83 1088 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 COL9A3Q14050 684 aaPredicted RBP6.15□□□□□ -1.42
SVIP-203ENST00000529848 PDE3AQ14432 1141 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 SCARA3Q6AZY7 606 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 BNC2Q6ZN30 1099 aaPredicted RBP6.15□□□□□ -1.42
SVIP-203ENST00000529848 FAM196AQ6ZSG2 479 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 PDZD3Q86UT5 571 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 GATAD2BQ8WXI9 593 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 NKD1Q969G9 470 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.15□□□□□ -1.42
SVIP-203ENST00000529848 ROBO2Q9HCK4 1378 aa6.15□□□□□ -1.43
SVIP-203ENST00000529848 F13A1P00488 732 aa6.14□□□□□ -1.43
SVIP-203ENST00000529848 ATF4P18848 351 aaPredicted RBP6.14□□□□□ -1.43
SVIP-203ENST00000529848 CD68P34810 354 aaPredicted RBP6.14□□□□□ -1.43
SVIP-203ENST00000529848 MPP2Q14168 576 aa6.14□□□□□ -1.43
SVIP-203ENST00000529848 GALNT11Q8NCW6 608 aa6.14□□□□□ -1.43
SVIP-203ENST00000529848 UBXN4Q92575 508 aa6.14□□□□□ -1.43
SVIP-203ENST00000529848 GAL3ST3Q96A11 431 aa6.14□□□□□ -1.43
SVIP-203ENST00000529848 GMLQ99445 158 aa6.14□□□□□ -1.43
SVIP-203ENST00000529848 KRT82Q9NSB4 513 aa6.14□□□□□ -1.43
SVIP-203ENST00000529848 UBP1Q9NZI7 540 aa6.14□□□□□ -1.43
SVIP-203ENST00000529848 MKL2Q9ULH7 1088 aa6.14□□□□□ -1.43
SVIP-203ENST00000529848 GNB5O14775 395 aa6.13□□□□□ -1.43
SVIP-203ENST00000529848 TLR3O15455 904 aaKnown RBP6.13□□□□□ -1.43
SVIP-203ENST00000529848 DDX3YO15523 660 aaKnown RBP6.13□□□□□ -1.43
SVIP-203ENST00000529848 ECEL1O95672 775 aa6.13□□□□□ -1.43
SVIP-203ENST00000529848 HOXB4P17483 251 aaPredicted RBP6.13□□□□□ -1.43
SVIP-203ENST00000529848 COL9A2Q14055 689 aaPredicted RBP6.13□□□□□ -1.43
SVIP-203ENST00000529848 CWF19L2Q2TBE0 894 aaKnown RBP6.13□□□□□ -1.43
SVIP-203ENST00000529848 GPBAR1Q8TDU6 330 aa6.13□□□□□ -1.43
SVIP-203ENST00000529848 SEC16BQ96JE7 1060 aa6.13□□□□□ -1.43
SVIP-203ENST00000529848 NRSN2Q9GZP1 204 aa6.13□□□□□ -1.43
SVIP-203ENST00000529848 PCDHA4Q9UN74 947 aa6.13□□□□□ -1.43
SVIP-203ENST00000529848 EFR3BQ9Y2G0 817 aa6.13□□□□□ -1.43
SVIP-203ENST00000529848 A0A0A0MRY4 1105 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 CILPO75339 1184 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 DEAF1O75398 565 aaPredicted RBP6.12□□□□□ -1.43
SVIP-203ENST00000529848 ARHGEF15O94989 841 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 SSBP05455 408 aaKnown RBP eCLIP6.12□□□□□ -1.43
SVIP-203ENST00000529848 MCM4P33991 863 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 GTF2F1P35269 517 aaKnown RBP eCLIP6.12□□□□□ -1.43
SVIP-203ENST00000529848 NASPP49321 788 aaPredicted RBP6.12□□□□□ -1.43
SVIP-203ENST00000529848 SNRPNP63162 240 aaKnown RBP6.12□□□□□ -1.43
SVIP-203ENST00000529848 RPL6Q02878 288 aaKnown RBP6.12□□□□□ -1.43
SVIP-203ENST00000529848 TRIM28Q13263 835 aaKnown RBP6.12□□□□□ -1.43
SVIP-203ENST00000529848 FOXD4L6Q3SYB3 417 aaPredicted RBP6.12□□□□□ -1.43
SVIP-203ENST00000529848 SEZ6Q53EL9 994 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 FOXD4L3Q6VB84 417 aaPredicted RBP6.12□□□□□ -1.43
SVIP-203ENST00000529848 ILDR2Q71H61 639 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 PODNQ7Z5L7 613 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 FBXO11Q86XK2 927 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 FMR1NBQ8N0W7 255 aaPredicted RBP6.12□□□□□ -1.43
SVIP-203ENST00000529848 TRIM11Q96F44 468 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 PLVAPQ9BX97 442 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 LRRC3Q9BY71 257 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 CCDC86Q9H6F5 360 aaKnown RBP6.12□□□□□ -1.43
SVIP-203ENST00000529848 RAD18Q9NS91 495 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 GINM1Q9NU53 330 aa6.12□□□□□ -1.43
SVIP-203ENST00000529848 LOC100289279A0A1B0GTE1 492 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 FAM221AA4D161 298 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 ADAM11O75078 769 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 CTSBP07858 339 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 FGRP09769 529 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 LIG1P18858 919 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 CRKP46108 304 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 DUOXA2Q1HG44 320 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 PRRT3Q5FWE3 981 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 MPRIPQ6WCQ1 1025 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 MCF2L2Q86YR7 1114 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 SLITRK4Q8IW52 837 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 FBXO27Q8NI29 283 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 NOP53Q9NZM5 478 aaKnown RBP6.11□□□□□ -1.43
SVIP-203ENST00000529848 STRIP2Q9ULQ0 834 aa6.11□□□□□ -1.43
SVIP-203ENST00000529848 TM4SF5O14894 197 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 STK10O94804 968 aaKnown RBP6.1□□□□□ -1.43
SVIP-203ENST00000529848 SOX9P48436 509 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 ZNF165P49910 485 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 PTPN11Q06124 597 aaPredicted RBP6.1□□□□□ -1.43
SVIP-203ENST00000529848 LINC00114Q6XXX2 140 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 REC114Q7Z4M0 266 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 UBASH3BQ8TF42 649 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 CPLX3Q8WVH0 158 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 DHX38Q92620 1227 aaKnown RBP6.1□□□□□ -1.43
SVIP-203ENST00000529848 ELMO3Q96BJ8 720 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 ARMC5Q96C12 935 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 CACNA2D2Q9NY47 1150 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 KCNK4Q9NYG8 393 aa6.1□□□□□ -1.43
SVIP-203ENST00000529848 FAM229AH3BQW9 127 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 DLL1O00548 723 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 ZNF862O60290 1169 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 SLFN14P0C7P3 912 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 KIF4BQ2VIQ3 1234 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 WIPI1Q5MNZ9 446 aaPredicted RBP6.09□□□□□ -1.43
SVIP-203ENST00000529848 EXOSC6Q5RKV6 272 aaKnown RBP6.09□□□□□ -1.43
SVIP-203ENST00000529848 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.09□□□□□ -1.43
SVIP-203ENST00000529848 ACAD11Q709F0 780 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 HDXQ7Z353 690 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 FERD3LQ96RJ6 166 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 RUSC1Q9BVN2 902 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 BRMS1Q9HCU9 246 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms