RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 TOMM70O94826 608 aa21.1■□□□□ 0.97
CLP1-204ENST00000529773 BTDP43251 543 aa21.1■□□□□ 0.97
CLP1-204ENST00000529773 RBM5P52756 815 aaKnown RBP eCLIP21.1■□□□□ 0.97
CLP1-204ENST00000529773 RHBDL3P58872 404 aa21.1■□□□□ 0.97
CLP1-204ENST00000529773 LRRFIP1Q32MZ4 808 aaKnown RBP21.1■□□□□ 0.97
CLP1-204ENST00000529773 FKBP1CQ5VVH2 108 aa21.1■□□□□ 0.97
CLP1-204ENST00000529773 SKAP1Q86WV1 359 aa21.1■□□□□ 0.97
CLP1-204ENST00000529773 FOCADQ5VW36 1801 aa21.09■□□□□ 0.97
CLP1-204ENST00000529773 CYP7A1P22680 504 aa21.09■□□□□ 0.97
CLP1-204ENST00000529773 ANGEL2Q5VTE6 544 aaKnown RBP21.09■□□□□ 0.97
CLP1-204ENST00000529773 CHADLQ6NUI6 762 aa21.09■□□□□ 0.97
CLP1-204ENST00000529773 CDC42EP5Q6NZY7 148 aa21.09■□□□□ 0.97
CLP1-204ENST00000529773 APOBEC3FQ8IUX4 373 aaKnown RBP21.09■□□□□ 0.97
CLP1-204ENST00000529773 RIOK1Q9BRS2 568 aaKnown RBP21.09■□□□□ 0.97
CLP1-204ENST00000529773 FSD1Q9BTV5 496 aa21.09■□□□□ 0.97
CLP1-204ENST00000529773 AK9Q5TCS8 1911 aa21.09■□□□□ 0.97
CLP1-204ENST00000529773 RNF113AO15541 343 aaKnown RBP21.08■□□□□ 0.97
CLP1-204ENST00000529773 TDRD3Q9H7E2 651 aaKnown RBP21.08■□□□□ 0.97
CLP1-204ENST00000529773 ZNF70Q9UC06 446 aaPredicted RBP21.08■□□□□ 0.97
CLP1-204ENST00000529773 NPM3O75607 178 aaKnown RBP21.07■□□□□ 0.96
CLP1-204ENST00000529773 BAG3O95817 575 aa21.07■□□□□ 0.96
CLP1-204ENST00000529773 PLCG2P16885 1265 aa21.07■□□□□ 0.96
CLP1-204ENST00000529773 BMP2KLQ5H9B9 411 aa21.07■□□□□ 0.96
CLP1-204ENST00000529773 SMC1BQ8NDV3 1235 aa21.07■□□□□ 0.96
CLP1-204ENST00000529773 APPBP2Q92624 585 aa21.07■□□□□ 0.96
CLP1-204ENST00000529773 IDI2Q9BXS1 227 aa21.07■□□□□ 0.96
CLP1-204ENST00000529773 RPAP1Q9BWH6 1393 aaPredicted RBP21.07■□□□□ 0.96
CLP1-204ENST00000529773 CDK5RAP2Q96SN8 1893 aa21.07■□□□□ 0.96
CLP1-204ENST00000529773 COL2A1P02458 1487 aaPredicted RBP21.07■□□□□ 0.96
CLP1-204ENST00000529773 TRIM6-TRIM34B2RNG4 842 aa21.06■□□□□ 0.96
CLP1-204ENST00000529773 WDHD1O75717 1129 aaPredicted RBP21.06■□□□□ 0.96
CLP1-204ENST00000529773 CHGBP05060 677 aa21.06■□□□□ 0.96
CLP1-204ENST00000529773 SDSP20132 328 aa21.06■□□□□ 0.96
CLP1-204ENST00000529773 PPP2R3BQ9Y5P8 575 aa21.06■□□□□ 0.96
CLP1-204ENST00000529773 DDX60LQ5H9U9 1706 aaKnown RBP21.06■□□□□ 0.96
CLP1-204ENST00000529773 CLRN2A0PK11 232 aa21.05■□□□□ 0.96
CLP1-204ENST00000529773 FSTL1Q12841 308 aa21.05■□□□□ 0.96
CLP1-204ENST00000529773 TNFAIP1Q13829 316 aa21.05■□□□□ 0.96
CLP1-204ENST00000529773 ZMYM1Q5SVZ6 1142 aa21.05■□□□□ 0.96
CLP1-204ENST00000529773 FAM83AQ86UY5 434 aa21.05■□□□□ 0.96
CLP1-204ENST00000529773 DCPSQ96C86 337 aaKnown RBP21.05■□□□□ 0.96
CLP1-204ENST00000529773 NOL10Q9BSC4 688 aaKnown RBP21.05■□□□□ 0.96
CLP1-204ENST00000529773 USP40Q9NVE5 1235 aa21.05■□□□□ 0.96
CLP1-204ENST00000529773 AATFQ9NY61 560 aaKnown RBP eCLIP21.05■□□□□ 0.96
CLP1-204ENST00000529773 CNTNAP1P78357 1384 aa21.05■□□□□ 0.96
CLP1-204ENST00000529773 ITGBL1O95965 494 aaPredicted RBP21.04■□□□□ 0.96
CLP1-204ENST00000529773 RGS3P49796 1198 aa21.04■□□□□ 0.96
CLP1-204ENST00000529773 SLFNL1Q499Z3 407 aa21.04■□□□□ 0.96
CLP1-204ENST00000529773 MAP1SQ66K74 1059 aaPredicted RBP21.04■□□□□ 0.96
CLP1-204ENST00000529773 CDC37L1Q7L3B6 337 aa21.04■□□□□ 0.96
CLP1-204ENST00000529773 TMOD2Q9NZR1 351 aa21.04■□□□□ 0.96
CLP1-204ENST00000529773 CLEC11AQ9Y240 323 aa21.04■□□□□ 0.96
CLP1-204ENST00000529773 GTF3C3Q9Y5Q9 886 aa21.04■□□□□ 0.96
CLP1-204ENST00000529773 MAGEB6P1A0A0J9YX57 407 aa21.03■□□□□ 0.96
CLP1-204ENST00000529773 KRT26Q7Z3Y9 468 aa21.03■□□□□ 0.96
CLP1-204ENST00000529773 SULF1Q8IWU6 871 aa21.03■□□□□ 0.96
CLP1-204ENST00000529773 MIGA1Q8NAN2 632 aa21.03■□□□□ 0.96
CLP1-204ENST00000529773 OSBP2Q969R2 916 aa21.03■□□□□ 0.96
CLP1-204ENST00000529773 RILPL2Q969X0 211 aa21.03■□□□□ 0.96
CLP1-204ENST00000529773 PUS7LQ9H0K6 701 aaKnown RBP21.03■□□□□ 0.96
CLP1-204ENST00000529773 PASKQ96RG2 1323 aa21.03■□□□□ 0.96
CLP1-204ENST00000529773 ATRNL1Q5VV63 1379 aa21.02■□□□□ 0.96
CLP1-204ENST00000529773 HIP1O00291 1037 aa21.02■□□□□ 0.96
CLP1-204ENST00000529773 ENTPD3O75355 529 aa21.02■□□□□ 0.96
CLP1-204ENST00000529773 DYNLL1P63167 89 aaKnown RBP21.02■□□□□ 0.96
CLP1-204ENST00000529773 NFIAQ12857 509 aa21.02■□□□□ 0.96
CLP1-204ENST00000529773 SH3RF3Q8TEJ3 882 aaPredicted RBP21.02■□□□□ 0.96
CLP1-204ENST00000529773 VEZTQ9HBM0 779 aa21.02■□□□□ 0.96
CLP1-204ENST00000529773 FAM198AQ9UFP1 575 aa21.02■□□□□ 0.96
CLP1-204ENST00000529773 POLR2AP24928 1970 aaKnown RBP21.01■□□□□ 0.95
CLP1-204ENST00000529773 ADM5C9JUS6 153 aa21.01■□□□□ 0.95
CLP1-204ENST00000529773 CACNB3P54284 484 aa21.01■□□□□ 0.95
CLP1-204ENST00000529773 LCORLQ8N3X6 602 aa21.01■□□□□ 0.95
CLP1-204ENST00000529773 GLIS2Q9BZE0 524 aaPredicted RBP21.01■□□□□ 0.95
CLP1-204ENST00000529773 DEFB129Q9H1M3 183 aa21.01■□□□□ 0.95
CLP1-204ENST00000529773 DDX4Q9NQI0 724 aaKnown RBP21.01■□□□□ 0.95
CLP1-204ENST00000529773 HELLSQ9NRZ9 838 aa21.01■□□□□ 0.95
CLP1-204ENST00000529773 MBD4O95243 580 aa21■□□□□ 0.95
CLP1-204ENST00000529773 TNNI2P48788 182 aa21■□□□□ 0.95
CLP1-204ENST00000529773 TEX11Q8IYF3 940 aa21■□□□□ 0.95
CLP1-204ENST00000529773 TEPSINQ96N21 525 aa21■□□□□ 0.95
CLP1-204ENST00000529773 MKRN1Q9UHC7 482 aaKnown RBP21■□□□□ 0.95
CLP1-204ENST00000529773 SSC5DA1L4H1 1573 aa21■□□□□ 0.95
CLP1-204ENST00000529773 FLT1P17948 1338 aa21■□□□□ 0.95
CLP1-204ENST00000529773 NAV1Q8NEY1 1877 aa20.99■□□□□ 0.95
CLP1-204ENST00000529773 A0A0D9SFI3 127 aa20.99■□□□□ 0.95
CLP1-204ENST00000529773 TCP10L2B9ZVM9 353 aa20.99■□□□□ 0.95
CLP1-204ENST00000529773 M0R2C6 588 aa20.99■□□□□ 0.95
CLP1-204ENST00000529773 RASA3Q14644 834 aa20.99■□□□□ 0.95
CLP1-204ENST00000529773 USP48Q86UV5 1035 aa20.99■□□□□ 0.95
CLP1-204ENST00000529773 FAM151AQ8WW52 585 aa20.99■□□□□ 0.95
CLP1-204ENST00000529773 STRBPQ96SI9 672 aaKnown RBP20.99■□□□□ 0.95
CLP1-204ENST00000529773 GPAA1O43292 621 aa20.98■□□□□ 0.95
CLP1-204ENST00000529773 NMIQ13287 307 aaPredicted RBP20.98■□□□□ 0.95
CLP1-204ENST00000529773 AIDAQ96BJ3 306 aa20.98■□□□□ 0.95
CLP1-204ENST00000529773 FAM227BQ96M60 508 aa20.98■□□□□ 0.95
CLP1-204ENST00000529773 SEC62Q99442 399 aaKnown RBP20.98■□□□□ 0.95
CLP1-204ENST00000529773 CRNKL1Q9BZJ0 848 aaKnown RBP20.98■□□□□ 0.95
CLP1-204ENST00000529773 OSBPL5Q9H0X9 879 aaPredicted RBP20.98■□□□□ 0.95
CLP1-204ENST00000529773 ARMT1Q9H993 441 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms