RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 FRMD6Q96NE9 622 aa7.85□□□□□ -1.15
C11orf88-204ENST00000529661 CEP44Q9C0F1 390 aa7.85□□□□□ -1.15
C11orf88-204ENST00000529661 CBX8Q9HC52 389 aa7.85□□□□□ -1.15
C11orf88-204ENST00000529661 PPM1HQ9ULR3 514 aa7.85□□□□□ -1.15
C11orf88-204ENST00000529661 RAB6AP20340 208 aa7.84□□□□□ -1.15
C11orf88-204ENST00000529661 STK35Q8TDR2 534 aa7.84□□□□□ -1.15
C11orf88-204ENST00000529661 FBLIM1Q8WUP2 373 aa7.84□□□□□ -1.15
C11orf88-204ENST00000529661 NECAB3Q96P71 396 aaPredicted RBP7.84□□□□□ -1.15
C11orf88-204ENST00000529661 FAM83CQ9BQN1 747 aa7.84□□□□□ -1.15
C11orf88-204ENST00000529661 WDR18Q9BV38 432 aa7.84□□□□□ -1.15
C11orf88-204ENST00000529661 TTF2Q9UNY4 1162 aaKnown RBP7.84□□□□□ -1.15
C11orf88-204ENST00000529661 ACTL7BQ9Y614 415 aa7.84□□□□□ -1.15
C11orf88-204ENST00000529661 SCO2A0A1W2PP80 73 aa7.83□□□□□ -1.16
C11orf88-204ENST00000529661 ENC1O14682 589 aa7.83□□□□□ -1.16
C11orf88-204ENST00000529661 GSC2O15499 205 aa7.83□□□□□ -1.16
C11orf88-204ENST00000529661 IGLV1-40P01703 118 aa7.83□□□□□ -1.16
C11orf88-204ENST00000529661 ARNTP27540 789 aa7.83□□□□□ -1.16
C11orf88-204ENST00000529661 CDPF1Q6NVV7 123 aa7.83□□□□□ -1.16
C11orf88-204ENST00000529661 WDR89Q96FK6 387 aaPredicted RBP7.83□□□□□ -1.16
C11orf88-204ENST00000529661 PARP2Q9UGN5 583 aa7.83□□□□□ -1.16
C11orf88-204ENST00000529661 PAGE1O75459 146 aa7.82□□□□□ -1.16
C11orf88-204ENST00000529661 NME2P22392 152 aa7.82□□□□□ -1.16
C11orf88-204ENST00000529661 HNRNPUQ00839 825 aaKnown RBP eCLIP7.82□□□□□ -1.16
C11orf88-204ENST00000529661 NFIAQ12857 509 aa7.82□□□□□ -1.16
C11orf88-204ENST00000529661 NFKBIBQ15653 356 aa7.82□□□□□ -1.16
C11orf88-204ENST00000529661 MAP1SQ66K74 1059 aaPredicted RBP7.82□□□□□ -1.16
C11orf88-204ENST00000529661 RNF43Q68DV7 783 aa7.82□□□□□ -1.16
C11orf88-204ENST00000529661 PDZD3Q86UT5 571 aa7.82□□□□□ -1.16
C11orf88-204ENST00000529661 YIPF2Q9BWQ6 316 aa7.82□□□□□ -1.16
C11orf88-204ENST00000529661 FAM95CA0A1B0GW59 222 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 ZNF862O60290 1169 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 CELA3AP09093 270 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 SLFN14P0C7P3 912 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 ASPAP45381 313 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 RANGAP1P46060 587 aaPredicted RBP7.81□□□□□ -1.16
C11orf88-204ENST00000529661 XPCQ01831 940 aaPredicted RBP7.81□□□□□ -1.16
C11orf88-204ENST00000529661 PSMD2Q13200 908 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 FBXO33Q7Z6M2 555 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 ACSBG1Q96GR2 724 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 FAM161BQ96MY7 647 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 EMILIN2Q9BXX0 1053 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 KRT82Q9NSB4 513 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 FAM105AQ9NUU6 356 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 PPP1R9AQ9ULJ8 1098 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 SAMM50Q9Y512 469 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 AK5Q9Y6K8 562 aa7.81□□□□□ -1.16
C11orf88-204ENST00000529661 ERCC3P19447 782 aa7.8□□□□□ -1.16
C11orf88-204ENST00000529661 TAGLNQ01995 201 aaKnown RBP7.8□□□□□ -1.16
C11orf88-204ENST00000529661 ARTNQ5T4W7 220 aa7.8□□□□□ -1.16
C11orf88-204ENST00000529661 PAOXQ6QHF9 649 aa7.8□□□□□ -1.16
C11orf88-204ENST00000529661 SLC51AQ86UW1 340 aa7.8□□□□□ -1.16
C11orf88-204ENST00000529661 FBXL6Q8N531 539 aa7.8□□□□□ -1.16
C11orf88-204ENST00000529661 GRIN3AQ8TCU5 1115 aa7.8□□□□□ -1.16
C11orf88-204ENST00000529661 DBNDD2Q9BQY9 259 aa7.8□□□□□ -1.16
C11orf88-204ENST00000529661 TMPRSS2O15393 492 aa7.79□□□□□ -1.16
C11orf88-204ENST00000529661 NFICP08651 508 aa7.79□□□□□ -1.16
C11orf88-204ENST00000529661 ID3Q02535 119 aa7.79□□□□□ -1.16
C11orf88-204ENST00000529661 KIF4BQ2VIQ3 1234 aa7.79□□□□□ -1.16
C11orf88-204ENST00000529661 MFSD14AQ96MC6 490 aa7.79□□□□□ -1.16
C11orf88-204ENST00000529661 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.78□□□□□ -1.16
C11orf88-204ENST00000529661 BMP6P22004 513 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 ZNF252P-AS1Q0IIN9 211 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 LRP8Q14114 963 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 CCDC85BQ15834 202 aaPredicted RBP7.78□□□□□ -1.16
C11orf88-204ENST00000529661 MPRIPQ6WCQ1 1025 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 SHKBP1Q8TBC3 707 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 GPBAR1Q8TDU6 330 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 ANKRD24Q8TF21 1146 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 PIDD1Q9HB75 910 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 LGR6Q9HBX8 967 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 CRIM1Q9NZV1 1036 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 RNF112Q9ULX5 631 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 DAGLAQ9Y4D2 1042 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 SYNGAP1Q96PV0 1343 aa7.78□□□□□ -1.16
C11orf88-204ENST00000529661 WDR64B1ANS9 1081 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 TGFB1P01137 390 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 DAB2P98082 770 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 MAP7Q14244 749 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 RASIP1Q5U651 963 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 PCNX4Q63HM2 1172 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 LLGL2Q6P1M3 1020 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 ZDHHC13Q8IUH4 622 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 EZH1Q92800 747 aaPredicted RBP7.77□□□□□ -1.17
C11orf88-204ENST00000529661 ATXN3LQ9H3M9 355 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 SEMA6CQ9H3T2 930 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 ACSS3Q9H6R3 686 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 ZFP64Q9NPA5 681 aa7.77□□□□□ -1.17
C11orf88-204ENST00000529661 LRRC14Q15048 493 aa7.76□□□□□ -1.17
C11orf88-204ENST00000529661 MEI1Q5TIA1 1274 aa7.76□□□□□ -1.17
C11orf88-204ENST00000529661 SV2BQ7L1I2 683 aa7.76□□□□□ -1.17
C11orf88-204ENST00000529661 FANCD2OSQ96PS1 177 aa7.76□□□□□ -1.17
C11orf88-204ENST00000529661 GSX1Q9H4S2 264 aaPredicted RBP7.76□□□□□ -1.17
C11orf88-204ENST00000529661 MRS2Q9HD23 443 aa7.76□□□□□ -1.17
C11orf88-204ENST00000529661 PCDHGC5Q9Y5F6 944 aa7.76□□□□□ -1.17
C11orf88-204ENST00000529661 MAP3K11Q16584 847 aa7.75□□□□□ -1.17
C11orf88-204ENST00000529661 TMC4Q7Z404 712 aa7.75□□□□□ -1.17
C11orf88-204ENST00000529661 ZNF428Q96B54 188 aa7.75□□□□□ -1.17
C11orf88-204ENST00000529661 TBC1D32Q96NH3 1257 aa7.75□□□□□ -1.17
C11orf88-204ENST00000529661 BCL2L13Q9BXK5 485 aa7.75□□□□□ -1.17
C11orf88-204ENST00000529661 DISC1Q9NRI5 854 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms