RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 DIXDC1Q155Q3 683 aa17.42■□□□□ 0.38
UBXN1-209ENST00000528907 TBC1D10BQ4KMP7 808 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-209ENST00000528907 SLC9C2Q5TAH2 1124 aa17.42■□□□□ 0.38
UBXN1-209ENST00000528907 MAGEB6Q8N7X4 407 aa17.42■□□□□ 0.38
UBXN1-209ENST00000528907 PRMT6Q96LA8 375 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-209ENST00000528907 PITPNM2Q9BZ72 1349 aa17.42■□□□□ 0.38
UBXN1-209ENST00000528907 BMP2KLQ5H9B9 411 aa17.41■□□□□ 0.38
UBXN1-209ENST00000528907 FOCADQ5VW36 1801 aa17.41■□□□□ 0.38
UBXN1-209ENST00000528907 RNF113AO15541 343 aaKnown RBP17.4■□□□□ 0.38
UBXN1-209ENST00000528907 MYO1BO43795 1136 aa17.4■□□□□ 0.38
UBXN1-209ENST00000528907 CYP7A1P22680 504 aa17.4■□□□□ 0.38
UBXN1-209ENST00000528907 NBPF9Q3BBW0 867 aa17.4■□□□□ 0.38
UBXN1-209ENST00000528907 SPDYE2Q495Y8 402 aa17.4■□□□□ 0.38
UBXN1-209ENST00000528907 ADGRA1Q86SQ6 560 aa17.4■□□□□ 0.38
UBXN1-209ENST00000528907 LDHDQ86WU2 507 aa17.4■□□□□ 0.38
UBXN1-209ENST00000528907 FSD1Q9BTV5 496 aa17.4■□□□□ 0.38
UBXN1-209ENST00000528907 ZNF532Q9HCE3 1301 aa17.4■□□□□ 0.38
UBXN1-209ENST00000528907 TRIM6-TRIM34B2RNG4 842 aa17.39■□□□□ 0.37
UBXN1-209ENST00000528907 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
UBXN1-209ENST00000528907 BAG3O95817 575 aa17.39■□□□□ 0.37
UBXN1-209ENST00000528907 PLCG2P16885 1265 aa17.39■□□□□ 0.37
UBXN1-209ENST00000528907 SDSP20132 328 aa17.39■□□□□ 0.37
UBXN1-209ENST00000528907 RBM5P52756 815 aaKnown RBP eCLIP17.39■□□□□ 0.37
UBXN1-209ENST00000528907 FKBP1CQ5VVH2 108 aa17.39■□□□□ 0.37
UBXN1-209ENST00000528907 APPBP2Q92624 585 aa17.39■□□□□ 0.37
UBXN1-209ENST00000528907 PCDHAC2Q9Y5I4 1007 aa17.39■□□□□ 0.37
UBXN1-209ENST00000528907 CDK5RAP2Q96SN8 1893 aa17.39■□□□□ 0.37
UBXN1-209ENST00000528907 HIP1O00291 1037 aa17.38■□□□□ 0.37
UBXN1-209ENST00000528907 HSPA1AP0DMV8 641 aaKnown RBP17.38■□□□□ 0.37
UBXN1-209ENST00000528907 HSPA1BP0DMV9 641 aaKnown RBP17.38■□□□□ 0.37
UBXN1-209ENST00000528907 BTDP43251 543 aa17.38■□□□□ 0.37
UBXN1-209ENST00000528907 RGS3P49796 1198 aa17.38■□□□□ 0.37
UBXN1-209ENST00000528907 RHBDL3P58872 404 aa17.38■□□□□ 0.37
UBXN1-209ENST00000528907 RBM26Q5T8P6 1007 aaKnown RBP17.38■□□□□ 0.37
UBXN1-209ENST00000528907 SKAP1Q86WV1 359 aa17.38■□□□□ 0.37
UBXN1-209ENST00000528907 RILPL2Q969X0 211 aa17.38■□□□□ 0.37
UBXN1-209ENST00000528907 RIOK1Q9BRS2 568 aaKnown RBP17.38■□□□□ 0.37
UBXN1-209ENST00000528907 ZMYM1Q5SVZ6 1142 aa17.37■□□□□ 0.37
UBXN1-209ENST00000528907 CDC42EP5Q6NZY7 148 aa17.37■□□□□ 0.37
UBXN1-209ENST00000528907 NOL10Q9BSC4 688 aaKnown RBP17.37■□□□□ 0.37
UBXN1-209ENST00000528907 IDI2Q9BXS1 227 aa17.37■□□□□ 0.37
UBXN1-209ENST00000528907 TDRD3Q9H7E2 651 aaKnown RBP17.37■□□□□ 0.37
UBXN1-209ENST00000528907 ZNF70Q9UC06 446 aaPredicted RBP17.37■□□□□ 0.37
UBXN1-209ENST00000528907 EAPPQ56P03 285 aaPredicted RBP17.36■□□□□ 0.37
UBXN1-209ENST00000528907 APOBEC3FQ8IUX4 373 aaKnown RBP17.36■□□□□ 0.37
UBXN1-209ENST00000528907 HELLSQ9NRZ9 838 aa17.36■□□□□ 0.37
UBXN1-209ENST00000528907 USP40Q9NVE5 1235 aa17.36■□□□□ 0.37
UBXN1-209ENST00000528907 PPP2R3BQ9Y5P8 575 aa17.36■□□□□ 0.37
UBXN1-209ENST00000528907 POLR2AP24928 1970 aaKnown RBP17.35■□□□□ 0.37
UBXN1-209ENST00000528907 MAGEB6P1A0A0J9YX57 407 aa17.35■□□□□ 0.37
UBXN1-209ENST00000528907 TNFAIP1Q13829 316 aa17.35■□□□□ 0.37
UBXN1-209ENST00000528907 ANGEL2Q5VTE6 544 aaKnown RBP17.35■□□□□ 0.37
UBXN1-209ENST00000528907 CHADLQ6NUI6 762 aa17.35■□□□□ 0.37
UBXN1-209ENST00000528907 FAM83AQ86UY5 434 aa17.35■□□□□ 0.37
UBXN1-209ENST00000528907 DCPSQ96C86 337 aaKnown RBP17.35■□□□□ 0.37
UBXN1-209ENST00000528907 AATFQ9NY61 560 aaKnown RBP eCLIP17.35■□□□□ 0.37
UBXN1-209ENST00000528907 GGA3Q9NZ52 723 aa17.35■□□□□ 0.37
UBXN1-209ENST00000528907 COL2A1P02458 1487 aaPredicted RBP17.35■□□□□ 0.37
UBXN1-209ENST00000528907 ASTN2O75129 1339 aaPredicted RBP17.34■□□□□ 0.37
UBXN1-209ENST00000528907 ENTPD3O75355 529 aa17.34■□□□□ 0.37
UBXN1-209ENST00000528907 CHGBP05060 677 aa17.34■□□□□ 0.37
UBXN1-209ENST00000528907 POTEIP0CG38 1075 aa17.34■□□□□ 0.37
UBXN1-209ENST00000528907 POTEJP0CG39 1038 aa17.34■□□□□ 0.37
UBXN1-209ENST00000528907 CDC37L1Q7L3B6 337 aa17.34■□□□□ 0.37
UBXN1-209ENST00000528907 OSBP2Q969R2 916 aa17.34■□□□□ 0.37
UBXN1-209ENST00000528907 RPAP1Q9BWH6 1393 aaPredicted RBP17.34■□□□□ 0.37
UBXN1-209ENST00000528907 PUS7LQ9H0K6 701 aaKnown RBP17.34■□□□□ 0.37
UBXN1-209ENST00000528907 TMOD2Q9NZR1 351 aa17.34■□□□□ 0.37
UBXN1-209ENST00000528907 WDHD1O75717 1129 aaPredicted RBP17.33■□□□□ 0.36
UBXN1-209ENST00000528907 TNNI2P48788 182 aa17.33■□□□□ 0.36
UBXN1-209ENST00000528907 SLFNL1Q499Z3 407 aa17.33■□□□□ 0.36
UBXN1-209ENST00000528907 DDX60LQ5H9U9 1706 aaKnown RBP17.33■□□□□ 0.36
UBXN1-209ENST00000528907 RAD50Q92878 1312 aa17.32■□□□□ 0.36
UBXN1-209ENST00000528907 CLRN2A0PK11 232 aa17.32■□□□□ 0.36
UBXN1-209ENST00000528907 DYNLL1P63167 89 aaKnown RBP17.32■□□□□ 0.36
UBXN1-209ENST00000528907 MCMDC2Q4G0Z9 681 aa17.32■□□□□ 0.36
UBXN1-209ENST00000528907 MIGA1Q8NAN2 632 aa17.32■□□□□ 0.36
UBXN1-209ENST00000528907 SH3RF3Q8TEJ3 882 aaPredicted RBP17.32■□□□□ 0.36
UBXN1-209ENST00000528907 FAM151AQ8WW52 585 aa17.32■□□□□ 0.36
UBXN1-209ENST00000528907 AIDAQ96BJ3 306 aa17.32■□□□□ 0.36
UBXN1-209ENST00000528907 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
UBXN1-209ENST00000528907 CLEC11AQ9Y240 323 aa17.32■□□□□ 0.36
UBXN1-209ENST00000528907 CNTNAP1P78357 1384 aa17.31■□□□□ 0.36
UBXN1-209ENST00000528907 GNAT2P19087 354 aa17.31■□□□□ 0.36
UBXN1-209ENST00000528907 CHMLP26374 656 aa17.31■□□□□ 0.36
UBXN1-209ENST00000528907 SULF1Q8IWU6 871 aa17.31■□□□□ 0.36
UBXN1-209ENST00000528907 TEX11Q8IYF3 940 aa17.31■□□□□ 0.36
UBXN1-209ENST00000528907 LCORLQ8N3X6 602 aa17.31■□□□□ 0.36
UBXN1-209ENST00000528907 CRNKL1Q9BZJ0 848 aaKnown RBP17.31■□□□□ 0.36
UBXN1-209ENST00000528907 DIAPH3Q9NSV4 1193 aa17.31■□□□□ 0.36
UBXN1-209ENST00000528907 ATP8A2Q9NTI2 1148 aa17.31■□□□□ 0.36
UBXN1-209ENST00000528907 FAM198AQ9UFP1 575 aa17.31■□□□□ 0.36
UBXN1-209ENST00000528907 MKRN1Q9UHC7 482 aaKnown RBP17.31■□□□□ 0.36
UBXN1-209ENST00000528907 ATRNL1Q5VV63 1379 aa17.3■□□□□ 0.36
UBXN1-209ENST00000528907 A0A0D9SFI3 127 aa17.3■□□□□ 0.36
UBXN1-209ENST00000528907 M0R2C6 588 aa17.3■□□□□ 0.36
UBXN1-209ENST00000528907 GPAA1O43292 621 aa17.3■□□□□ 0.36
UBXN1-209ENST00000528907 MBD4O95243 580 aa17.3■□□□□ 0.36
UBXN1-209ENST00000528907 ITGBL1O95965 494 aaPredicted RBP17.3■□□□□ 0.36
UBXN1-209ENST00000528907 NFIAQ12857 509 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms