RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.26□□□□□ -1.25
USP47-206ENST00000525367 WFDC8Q8IUA0 241 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 DMRTC2Q8IXT2 367 aaPredicted RBP7.26□□□□□ -1.25
USP47-206ENST00000525367 GALNT11Q8NCW6 608 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 GMLQ99445 158 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 NRSN2Q9GZP1 204 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 GINM1Q9NU53 330 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 SUPT16HQ9Y5B9 1047 aaKnown RBP7.26□□□□□ -1.25
USP47-206ENST00000525367 DDX3YO15523 660 aaKnown RBP7.25□□□□□ -1.25
USP47-206ENST00000525367 SELPP16109 830 aa7.25□□□□□ -1.25
USP47-206ENST00000525367 ATF4P18848 351 aaPredicted RBP7.25□□□□□ -1.25
USP47-206ENST00000525367 RPS26P62854 115 aaKnown RBP7.25□□□□□ -1.25
USP47-206ENST00000525367 ARID5AQ03989 594 aa7.25□□□□□ -1.25
USP47-206ENST00000525367 SETDB1Q15047 1291 aa7.25□□□□□ -1.25
USP47-206ENST00000525367 MAP1SQ66K74 1059 aaPredicted RBP7.25□□□□□ -1.25
USP47-206ENST00000525367 LLGL2Q6P1M3 1020 aa7.25□□□□□ -1.25
USP47-206ENST00000525367 TRIM42Q8IWZ5 723 aa7.25□□□□□ -1.25
USP47-206ENST00000525367 KLHDC7BQ96G42 594 aa7.25□□□□□ -1.25
USP47-206ENST00000525367 DNAJC2Q99543 621 aaKnown RBP7.25□□□□□ -1.25
USP47-206ENST00000525367 ADAM11O75078 769 aa7.24□□□□□ -1.25
USP47-206ENST00000525367 DEAF1O75398 565 aaPredicted RBP7.24□□□□□ -1.25
USP47-206ENST00000525367 GSTP1P09211 210 aaKnown RBP7.24□□□□□ -1.25
USP47-206ENST00000525367 GTF2F1P35269 517 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP47-206ENST00000525367 NASPP49321 788 aaPredicted RBP7.24□□□□□ -1.25
USP47-206ENST00000525367 DGKGP49619 791 aa7.24□□□□□ -1.25
USP47-206ENST00000525367 NLRP12P59046 1061 aa7.24□□□□□ -1.25
USP47-206ENST00000525367 C19orf57Q0VDD7 668 aa7.24□□□□□ -1.25
USP47-206ENST00000525367 RASGRP4Q8TDF6 673 aa7.24□□□□□ -1.25
USP47-206ENST00000525367 KCNK4Q9NYG8 393 aa7.24□□□□□ -1.25
USP47-206ENST00000525367 EFR3BQ9Y2G0 817 aa7.24□□□□□ -1.25
USP47-206ENST00000525367 FAM221AA4D161 298 aa7.23□□□□□ -1.25
USP47-206ENST00000525367 PIP4K2BP78356 416 aa7.23□□□□□ -1.25
USP47-206ENST00000525367 FOXD4L6Q3SYB3 417 aaPredicted RBP7.23□□□□□ -1.25
USP47-206ENST00000525367 FOXD4L3Q6VB84 417 aaPredicted RBP7.23□□□□□ -1.25
USP47-206ENST00000525367 FAM196AQ6ZSG2 479 aa7.23□□□□□ -1.25
USP47-206ENST00000525367 ILDR2Q71H61 639 aa7.23□□□□□ -1.25
USP47-206ENST00000525367 PODNQ7Z5L7 613 aa7.23□□□□□ -1.25
USP47-206ENST00000525367 UBXN4Q92575 508 aa7.23□□□□□ -1.25
USP47-206ENST00000525367 KCNB2Q92953 911 aa7.23□□□□□ -1.25
USP47-206ENST00000525367 WDR89Q96FK6 387 aaPredicted RBP7.23□□□□□ -1.25
USP47-206ENST00000525367 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP47-206ENST00000525367 NT5C1AQ9BXI3 368 aa7.23□□□□□ -1.25
USP47-206ENST00000525367 MIR1-1HGQ9H1L0 117 aa7.23□□□□□ -1.25
USP47-206ENST00000525367 DLGAP3O95886 979 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 LMNB1P20700 586 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 MAOBP27338 520 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 SNRPNP63162 240 aaKnown RBP7.22□□□□□ -1.25
USP47-206ENST00000525367 APOBRQ0VD83 1088 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 SEZ6Q53EL9 994 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 CCDC81Q6ZN84 652 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 GPBAR1Q8TDU6 330 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 USP26Q9BXU7 913 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 CCDC86Q9H6F5 360 aaKnown RBP7.22□□□□□ -1.25
USP47-206ENST00000525367 SOX17Q9H6I2 414 aaPredicted RBP7.22□□□□□ -1.25
USP47-206ENST00000525367 RRAGCQ9HB90 399 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 LRRC4BQ9NT99 713 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 CYP8B1Q9UNU6 501 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 SAMM50Q9Y512 469 aa7.22□□□□□ -1.25
USP47-206ENST00000525367 ZNF862O60290 1169 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 ATP2B1P20020 1258 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 AP3B2Q13367 1082 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 POU4F3Q15319 338 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 FAM117BQ6P1L5 589 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 CACTIN-AS1Q8N1I8 211 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 GATAD2BQ8WXI9 593 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 NKD1Q969G9 470 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 TRIM11Q96F44 468 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 PRDM6Q9NQX0 595 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 PPT2Q9UMR5 302 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 MRVI1Q9Y6F6 885 aa7.21□□□□□ -1.26
USP47-206ENST00000525367 FAM229AH3BQW9 127 aa7.2□□□□□ -1.26
USP47-206ENST00000525367 PPM1GO15355 546 aaPredicted RBP7.2□□□□□ -1.26
USP47-206ENST00000525367 CILPO75339 1184 aa7.2□□□□□ -1.26
USP47-206ENST00000525367 WISP1O95388 367 aa7.2□□□□□ -1.26
USP47-206ENST00000525367 LIG1P18858 919 aa7.2□□□□□ -1.26
USP47-206ENST00000525367 LRRC14Q15048 493 aa7.2□□□□□ -1.26
USP47-206ENST00000525367 KRTAP1-3Q8IUG1 177 aa7.2□□□□□ -1.26
USP47-206ENST00000525367 UBASH3BQ8TF42 649 aa7.2□□□□□ -1.26
USP47-206ENST00000525367 EMILIN2Q9BXX0 1053 aa7.2□□□□□ -1.26
USP47-206ENST00000525367 OSGEPQ9NPF4 335 aa7.2□□□□□ -1.26
USP47-206ENST00000525367 LOC100289279A0A1B0GTE1 492 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 KRBA1A5PL33 1030 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 GRIN3BO60391 1043 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 SOX9P48436 509 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 ARL4DP49703 201 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 PDE3AQ14432 1141 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 INPP5AQ14642 412 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 VPS37DQ86XT2 251 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 SLITRK4Q8IW52 837 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 NEDD1Q8NHV4 660 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 PMFBP1Q8TBY8 1022 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 WNT8BQ93098 351 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 SPATA32Q96LK8 384 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 CORO1BQ9BR76 489 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 BRMS1Q9HCU9 246 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 CACNA2D2Q9NY47 1150 aa7.19□□□□□ -1.26
USP47-206ENST00000525367 POLR3KQ9Y2Y1 108 aaPredicted RBP7.19□□□□□ -1.26
USP47-206ENST00000525367 SMARCA5O60264 1052 aaPredicted RBP7.18□□□□□ -1.26
USP47-206ENST00000525367 TRIM37O94972 964 aa7.18□□□□□ -1.26
USP47-206ENST00000525367 NCLP19338 710 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms