RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SAMD7Q7Z3H4 446 aa7.91□□□□□ -1.14
CD44-214ENST00000525211 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.91□□□□□ -1.14
CD44-214ENST00000525211 SEC62Q99442 399 aaKnown RBP7.91□□□□□ -1.14
CD44-214ENST00000525211 GPHNQ9NQX3 736 aaPredicted RBP7.91□□□□□ -1.14
CD44-214ENST00000525211 PAG1Q9NWQ8 432 aa7.91□□□□□ -1.14
CD44-214ENST00000525211 ABCF2Q9UG63 623 aa7.91□□□□□ -1.14
CD44-214ENST00000525211 DENND2AQ9ULE3 1009 aa7.91□□□□□ -1.14
CD44-214ENST00000525211 TTC41PQ6P2S7 1318 aa7.9□□□□□ -1.14
CD44-214ENST00000525211 SALL1Q9NSC2 1324 aa7.9□□□□□ -1.14
CD44-214ENST00000525211 SEMA3EO15041 775 aa7.9□□□□□ -1.14
CD44-214ENST00000525211 SLURP2P0DP57 97 aa7.9□□□□□ -1.14
CD44-214ENST00000525211 SDSP20132 328 aa7.9□□□□□ -1.14
CD44-214ENST00000525211 DYNLL1P63167 89 aaKnown RBP7.9□□□□□ -1.14
CD44-214ENST00000525211 MECOMQ03112 1051 aa7.9□□□□□ -1.14
CD44-214ENST00000525211 FMR1Q06787 632 aaKnown RBP eCLIP7.9□□□□□ -1.14
CD44-214ENST00000525211 CAMK2BQ13554 666 aa7.9□□□□□ -1.14
CD44-214ENST00000525211 TBC1D10BQ4KMP7 808 aaPredicted RBP7.9□□□□□ -1.14
CD44-214ENST00000525211 RBM26Q5T8P6 1007 aaKnown RBP7.9□□□□□ -1.14
CD44-214ENST00000525211 POTEHQ6S545 545 aa7.9□□□□□ -1.14
CD44-214ENST00000525211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.9□□□□□ -1.14
CD44-214ENST00000525211 NSUN4Q96CB9 384 aaKnown RBP7.9□□□□□ -1.14
CD44-214ENST00000525211 ZBED3Q96IU2 234 aaPredicted RBP7.9□□□□□ -1.14
CD44-214ENST00000525211 RRAGCQ9HB90 399 aa7.9□□□□□ -1.14
CD44-214ENST00000525211 GPRC5DQ9NZD1 345 aa7.9□□□□□ -1.14
CD44-214ENST00000525211 CNOT7Q9UIV1 285 aaKnown RBP7.9□□□□□ -1.14
CD44-214ENST00000525211 MYH13Q9UKX3 1938 aa7.9□□□□□ -1.15
CD44-214ENST00000525211 PDS5AQ29RF7 1337 aaKnown RBP7.89□□□□□ -1.15
CD44-214ENST00000525211 SMIM22K7EJ46 135 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 IDH1O75874 414 aaKnown RBP7.89□□□□□ -1.15
CD44-214ENST00000525211 GLRX3O76003 335 aaKnown RBP7.89□□□□□ -1.15
CD44-214ENST00000525211 PDE6AP16499 860 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 CACNB3P54284 484 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 ZNF280AP59817 542 aaPredicted RBP7.89□□□□□ -1.15
CD44-214ENST00000525211 FKBP1AP62942 108 aaKnown RBP7.89□□□□□ -1.15
CD44-214ENST00000525211 TNIP1Q15025 636 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 NBPF9Q3BBW0 867 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 CFAP100Q494V2 611 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 PPP1R15BQ5SWA1 713 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 CCDC129Q6ZRS4 1044 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 CDAN1Q8IWY9 1227 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 GPC2Q8N158 579 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 WDR66Q8TBY9 1149 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 OSBP2Q969R2 916 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 RILPL2Q969X0 211 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 L3MBTL3Q96JM7 780 aaPredicted RBP7.89□□□□□ -1.15
CD44-214ENST00000525211 PRMT6Q96LA8 375 aaPredicted RBP7.89□□□□□ -1.15
CD44-214ENST00000525211 FAM227BQ96M60 508 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 GNL3LQ9NVN8 582 aaKnown RBP7.89□□□□□ -1.15
CD44-214ENST00000525211 TTF2Q9UNY4 1162 aaKnown RBP7.89□□□□□ -1.15
CD44-214ENST00000525211 DAGLAQ9Y4D2 1042 aa7.89□□□□□ -1.15
CD44-214ENST00000525211 ZNF532Q9HCE3 1301 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 DOCK2Q92608 1830 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 M0R2C6 588 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 FOXP2O15409 715 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 LDHBP07195 334 aaKnown RBP7.88□□□□□ -1.15
CD44-214ENST00000525211 CYP7A1P22680 504 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 ADD2P35612 726 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 CRKP46108 304 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 RHBDL3P58872 404 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 APOBEC3HQ6NTF7 200 aaKnown RBP7.88□□□□□ -1.15
CD44-214ENST00000525211 ERICH6Q7L0X2 663 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 ZFPM1Q8IX07 1006 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 MAGEB6Q8N7X4 407 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 KBTBD3Q8NAB2 608 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 MIGA1Q8NAN2 632 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 AGBL3Q8NEM8 1001 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 DPF2Q92785 391 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 PUS7LQ9H0K6 701 aaKnown RBP7.88□□□□□ -1.15
CD44-214ENST00000525211 TAF1DQ9H5J8 278 aaPredicted RBP7.88□□□□□ -1.15
CD44-214ENST00000525211 RAI14Q9P0K7 980 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 LRP2BPQ9P2M1 347 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 BOLA1Q9Y3E2 137 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 ARIH1Q9Y4X5 557 aaPredicted RBP7.88□□□□□ -1.15
CD44-214ENST00000525211 WDR90Q96KV7 1748 aa7.88□□□□□ -1.15
CD44-214ENST00000525211 GAKO14976 1311 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 A0A0D9SFI3 127 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 CLRN2A0PK11 232 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 TESPA1A2RU30 521 aaPredicted RBP7.87□□□□□ -1.15
CD44-214ENST00000525211 WNT10BO00744 389 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 KIF3CO14782 793 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 PRKAB2O43741 272 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 USP17L8P0C7I0 530 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 PLCG2P16885 1265 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 NFIAQ12857 509 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 NMIQ13287 307 aaPredicted RBP7.87□□□□□ -1.15
CD44-214ENST00000525211 SLC9C2Q5TAH2 1124 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 CDC42EP5Q6NZY7 148 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 ZNF589Q86UQ0 364 aaPredicted RBP7.87□□□□□ -1.15
CD44-214ENST00000525211 SH3RF3Q8TEJ3 882 aaPredicted RBP7.87□□□□□ -1.15
CD44-214ENST00000525211 DCBLD2Q96PD2 775 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 RIOK1Q9BRS2 568 aaKnown RBP7.87□□□□□ -1.15
CD44-214ENST00000525211 TMEM121BQ9BXQ6 578 aaPredicted RBP7.87□□□□□ -1.15
CD44-214ENST00000525211 TDRD3Q9H7E2 651 aaKnown RBP7.87□□□□□ -1.15
CD44-214ENST00000525211 MYOZ2Q9NPC6 264 aa7.87□□□□□ -1.15
CD44-214ENST00000525211 DDX4Q9NQI0 724 aaKnown RBP7.87□□□□□ -1.15
CD44-214ENST00000525211 MROH7-TTC4A0A0A0MT08 1334 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 ZC3H4Q9UPT8 1303 aaKnown RBP7.86□□□□□ -1.15
CD44-214ENST00000525211 TRIM6-TRIM34B2RNG4 842 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 ERC2O15083 957 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 RNF113AO15541 343 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms