RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 CERS3Q8IU89 383 aa9.43□□□□□ -0.9
NPAS4-202ENST00000524617 CNTROBQ8N137 903 aa9.43□□□□□ -0.9
NPAS4-202ENST00000524617 PRMT6Q96LA8 375 aaPredicted RBP9.43□□□□□ -0.9
NPAS4-202ENST00000524617 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.43□□□□□ -0.9
NPAS4-202ENST00000524617 COL2A1P02458 1487 aaPredicted RBP9.42□□□□□ -0.9
NPAS4-202ENST00000524617 ZNF532Q9HCE3 1301 aa9.42□□□□□ -0.9
NPAS4-202ENST00000524617 NPM3O75607 178 aaKnown RBP9.42□□□□□ -0.9
NPAS4-202ENST00000524617 BTDP43251 543 aa9.42□□□□□ -0.9
NPAS4-202ENST00000524617 LRRFIP1Q32MZ4 808 aaKnown RBP9.42□□□□□ -0.9
NPAS4-202ENST00000524617 BMP2KLQ5H9B9 411 aa9.42□□□□□ -0.9
NPAS4-202ENST00000524617 SLC9C2Q5TAH2 1124 aa9.42□□□□□ -0.9
NPAS4-202ENST00000524617 FKBP1CQ5VVH2 108 aa9.42□□□□□ -0.9
NPAS4-202ENST00000524617 SKAP1Q86WV1 359 aa9.42□□□□□ -0.9
NPAS4-202ENST00000524617 MAGEB6Q8N7X4 407 aa9.42□□□□□ -0.9
NPAS4-202ENST00000524617 RBM46Q8TBY0 533 aaKnown RBP9.42□□□□□ -0.9
NPAS4-202ENST00000524617 RIOK1Q9BRS2 568 aaKnown RBP9.42□□□□□ -0.9
NPAS4-202ENST00000524617 IDI2Q9BXS1 227 aa9.42□□□□□ -0.9
NPAS4-202ENST00000524617 GGA3Q9NZ52 723 aa9.42□□□□□ -0.9
NPAS4-202ENST00000524617 MYO5AQ9Y4I1 1855 aaKnown RBP9.42□□□□□ -0.9
NPAS4-202ENST00000524617 DDX60LQ5H9U9 1706 aaKnown RBP9.42□□□□□ -0.9
NPAS4-202ENST00000524617 MYH7P12883 1935 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 ASTN2O75129 1339 aaPredicted RBP9.41□□□□□ -0.9
NPAS4-202ENST00000524617 RNF113AO15541 343 aaKnown RBP9.41□□□□□ -0.9
NPAS4-202ENST00000524617 MYO1BO43795 1136 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 CHGBP05060 677 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 SDSP20132 328 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 CYP7A1P22680 504 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 ZMYM1Q5SVZ6 1142 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 ANGEL2Q5VTE6 544 aaKnown RBP9.41□□□□□ -0.9
NPAS4-202ENST00000524617 CDC42EP5Q6NZY7 148 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 APOBEC3FQ8IUX4 373 aaKnown RBP9.41□□□□□ -0.9
NPAS4-202ENST00000524617 APPBP2Q92624 585 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 FSD1Q9BTV5 496 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 ZNF70Q9UC06 446 aaPredicted RBP9.41□□□□□ -0.9
NPAS4-202ENST00000524617 PPP2R3BQ9Y5P8 575 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 MYH2Q9UKX2 1941 aa9.41□□□□□ -0.9
NPAS4-202ENST00000524617 CNTNAP1P78357 1384 aa9.4□□□□□ -0.9
NPAS4-202ENST00000524617 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.9
NPAS4-202ENST00000524617 TOMM70O94826 608 aa9.4□□□□□ -0.9
NPAS4-202ENST00000524617 BAG3O95817 575 aa9.4□□□□□ -0.9
NPAS4-202ENST00000524617 PLCG2P16885 1265 aa9.4□□□□□ -0.9
NPAS4-202ENST00000524617 RBM5P52756 815 aaKnown RBP eCLIP9.4□□□□□ -0.9
NPAS4-202ENST00000524617 TNFAIP1Q13829 316 aa9.4□□□□□ -0.9
NPAS4-202ENST00000524617 EAPPQ56P03 285 aaPredicted RBP9.4□□□□□ -0.9
NPAS4-202ENST00000524617 RBM26Q5T8P6 1007 aaKnown RBP9.4□□□□□ -0.9
NPAS4-202ENST00000524617 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
NPAS4-202ENST00000524617 FAM83AQ86UY5 434 aa9.4□□□□□ -0.9
NPAS4-202ENST00000524617 OSBP2Q969R2 916 aa9.4□□□□□ -0.9
NPAS4-202ENST00000524617 TDRD3Q9H7E2 651 aaKnown RBP9.4□□□□□ -0.9
NPAS4-202ENST00000524617 ATRNL1Q5VV63 1379 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 RAD50Q92878 1312 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 PASKQ96RG2 1323 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 CLRN2A0PK11 232 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 TRIM6-TRIM34B2RNG4 842 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 HIP1O00291 1037 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 ENTPD3O75355 529 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 RGS3P49796 1198 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 FSTL1Q12841 308 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 SLFNL1Q499Z3 407 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 LCORLQ8N3X6 602 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 SMC1BQ8NDV3 1235 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 PUS7LQ9H0K6 701 aaKnown RBP9.39□□□□□ -0.91
NPAS4-202ENST00000524617 HELLSQ9NRZ9 838 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 AATFQ9NY61 560 aaKnown RBP eCLIP9.39□□□□□ -0.91
NPAS4-202ENST00000524617 FAM198AQ9UFP1 575 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 MKRN1Q9UHC7 482 aaKnown RBP9.39□□□□□ -0.91
NPAS4-202ENST00000524617 FOCADQ5VW36 1801 aa9.39□□□□□ -0.91
NPAS4-202ENST00000524617 SSC5DA1L4H1 1573 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 FLT1P17948 1338 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 MAGEB6P1A0A0J9YX57 407 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 MBD4O95243 580 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 ITGBL1O95965 494 aaPredicted RBP9.38□□□□□ -0.91
NPAS4-202ENST00000524617 DYNLL1P63167 89 aaKnown RBP9.38□□□□□ -0.91
NPAS4-202ENST00000524617 NFIAQ12857 509 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 CDC37L1Q7L3B6 337 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 MIGA1Q8NAN2 632 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 SH3RF3Q8TEJ3 882 aaPredicted RBP9.38□□□□□ -0.91
NPAS4-202ENST00000524617 FAM151AQ8WW52 585 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 RILPL2Q969X0 211 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 DCPSQ96C86 337 aaKnown RBP9.38□□□□□ -0.91
NPAS4-202ENST00000524617 TEPSINQ96N21 525 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 NOL10Q9BSC4 688 aaKnown RBP9.38□□□□□ -0.91
NPAS4-202ENST00000524617 DDX4Q9NQI0 724 aaKnown RBP9.38□□□□□ -0.91
NPAS4-202ENST00000524617 USP40Q9NVE5 1235 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 TMOD2Q9NZR1 351 aa9.38□□□□□ -0.91
NPAS4-202ENST00000524617 A0A0D9SFI3 127 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 ADM5C9JUS6 153 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 M0R2C6 588 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 GPAA1O43292 621 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 CHMLP26374 656 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 TNNI2P48788 182 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 CACNB3P54284 484 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 NMIQ13287 307 aaPredicted RBP9.37□□□□□ -0.91
NPAS4-202ENST00000524617 MAP1SQ66K74 1059 aaPredicted RBP9.37□□□□□ -0.91
NPAS4-202ENST00000524617 KRT26Q7Z3Y9 468 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 SULF1Q8IWU6 871 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 TEX11Q8IYF3 940 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 AIDAQ96BJ3 306 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 FAM227BQ96M60 508 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 STRBPQ96SI9 672 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms