RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 CLK1P49759 484 aaKnown RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 HDAC4P56524 1084 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 ACTN3Q08043 901 aaPredicted RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 TMEM62Q0P6H9 643 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 TAF7Q15545 349 aaPredicted RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 TSR1Q2NL82 804 aaKnown RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 USP48Q86UV5 1035 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 LCA5Q86VQ0 697 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 DDX12PQ92771 950 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 YIPF3Q9GZM5 350 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 BRD8Q9H0E9 1235 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 QPCTLQ9NXS2 382 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 IKBKGQ9Y6K9 419 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 ERCC6Q03468 1493 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 MAP3K5Q99683 1374 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 ST18O60284 1047 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 CEP104O60308 925 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 ANKRD13DQ6ZTN6 518 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 ARHGAP27Q6ZUM4 889 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 BZW1Q7L1Q6 419 aaKnown RBP9.37□□□□□ -0.91
HMGB4-204ENST00000522796 FAM76AQ8TAV0 307 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 RABGGTAQ92696 567 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 SH3GL1Q99961 368 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 DHX36Q9H2U1 1008 aaKnown RBP9.37□□□□□ -0.91
HMGB4-204ENST00000522796 ARHGAP35Q9NRY4 1499 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 CFAP43Q8NDM7 1665 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 ANKRD30BQ9BXX2 1392 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 KIAA0754O94854 1291 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 FGFR1OPO95684 399 aaKnown RBP9.37□□□□□ -0.91
HMGB4-204ENST00000522796 DESP17661 470 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 INHBCP55103 352 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 UBE2HP62256 183 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 PPP2R5BQ15173 497 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 YTHDF3Q7Z739 585 aaKnown RBP9.37□□□□□ -0.91
HMGB4-204ENST00000522796 HOOK3Q86VS8 718 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 AFAP1L1Q8TED9 768 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 CENPTQ96BT3 561 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 CLIP3Q96DZ5 547 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 SCYL1Q96KG9 808 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 TSC22D3Q99576 134 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 CORO1BQ9BR76 489 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 TRIM5Q9C035 493 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 FAM204AQ9H8W3 233 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 C6orf203Q9P0P8 240 aaPredicted RBP9.37□□□□□ -0.91
HMGB4-204ENST00000522796 TRPC6Q9Y210 931 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 SPO11Q9Y5K1 396 aa9.37□□□□□ -0.91
HMGB4-204ENST00000522796 REREQ9P2R6 1566 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 EVC2Q86UK5 1308 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-204ENST00000522796 B4DLN1 442 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 HIP1RO75146 1068 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 KCNJ6P48051 423 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 CLCN2P51788 898 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 CCZ1BP86790 482 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 CCZ1P86791 482 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-204ENST00000522796 LONRF1Q17RB8 773 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 CCDC144BQ3MJ40 725 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 NEK10Q6ZWH5 1172 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 CCDC144CPQ8IYA2 1237 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 SMARCC1Q92922 1105 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-204ENST00000522796 SPAG5Q96R06 1193 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 IP6K2Q9UHH9 426 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 PHF24Q9UPV7 400 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 RPAP1Q9BWH6 1393 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-204ENST00000522796 MTRF1O75570 445 aaKnown RBP9.36□□□□□ -0.91
HMGB4-204ENST00000522796 MBD4O95243 580 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 SH3BGRP55822 239 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-204ENST00000522796 RCN1Q15293 331 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 CCDC40Q4G0X9 1142 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 CCDC38Q502W7 563 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 VPS53Q5VIR6 699 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 B4GALNT4Q76KP1 1039 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 GBP7Q8N8V2 638 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-204ENST00000522796 MIGA1Q8NAN2 632 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 UIMC1Q96RL1 719 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 MPHOSPH6Q99547 160 aaKnown RBP9.36□□□□□ -0.91
HMGB4-204ENST00000522796 VCPKMTQ9H867 229 aa9.36□□□□□ -0.91
HMGB4-204ENST00000522796 SYNMO15061 1565 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 DYTNA2CJ06 578 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 GNAT1P11488 350 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 PDE6BP35913 854 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 CUL4BQ13620 913 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 DCTN1Q14203 1278 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 EIF4A2Q14240 407 aaKnown RBP9.35□□□□□ -0.91
HMGB4-204ENST00000522796 GNPTABQ3T906 1256 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 RSRC2Q7L4I2 434 aaKnown RBP9.35□□□□□ -0.91
HMGB4-204ENST00000522796 APLFQ8IW19 511 aaPredicted RBP9.35□□□□□ -0.91
HMGB4-204ENST00000522796 SLC7A5P1Q8MH63 180 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 NGDNQ8NEJ9 315 aaKnown RBP9.35□□□□□ -0.91
HMGB4-204ENST00000522796 RBM46Q8TBY0 533 aaKnown RBP9.35□□□□□ -0.91
HMGB4-204ENST00000522796 SPIRE2Q8WWL2 714 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 HPS3Q969F9 1004 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 RBM33Q96EV2 1170 aaKnown RBP9.35□□□□□ -0.91
HMGB4-204ENST00000522796 ACSBG1Q96GR2 724 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 OSBPL10Q9BXB5 764 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 GMEB1Q9Y692 573 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 TOP2BQ02880 1626 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms