RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 PPP4CP60510 307 aa29.09■■■□□ 2.25
PVT1-212ENST00000521951 DYNLL1P63167 89 aaKnown RBP29.09■■■□□ 2.25
PVT1-212ENST00000521951 NOL10Q9BSC4 688 aaKnown RBP29.09■■■□□ 2.25
PVT1-212ENST00000521951 BAG3O95817 575 aa29.08■■■□□ 2.25
PVT1-212ENST00000521951 RIOK1Q9BRS2 568 aaKnown RBP29.08■■■□□ 2.25
PVT1-212ENST00000521951 ADARB2Q9NS39 739 aaKnown RBP29.08■■■□□ 2.25
PVT1-212ENST00000521951 KIF4BQ2VIQ3 1234 aa29.07■■■□□ 2.24
PVT1-212ENST00000521951 MCMDC2Q4G0Z9 681 aa29.07■■■□□ 2.24
PVT1-212ENST00000521951 TRPM4Q8TD43 1214 aa29.07■■■□□ 2.24
PVT1-212ENST00000521951 IQCA1LA6NCM1 817 aa29.06■■■□□ 2.24
PVT1-212ENST00000521951 WNT10BO00744 389 aa29.06■■■□□ 2.24
PVT1-212ENST00000521951 MBD4O95243 580 aa29.06■■■□□ 2.24
PVT1-212ENST00000521951 RUFY2Q8WXA3 655 aa29.06■■■□□ 2.24
PVT1-212ENST00000521951 AIDAQ96BJ3 306 aa29.06■■■□□ 2.24
PVT1-212ENST00000521951 NBPF9Q3BBW0 867 aa29.05■■■□□ 2.24
PVT1-212ENST00000521951 CDC42EP5Q6NZY7 148 aa29.05■■■□□ 2.24
PVT1-212ENST00000521951 CCDC129Q6ZRS4 1044 aa29.05■■■□□ 2.24
PVT1-212ENST00000521951 LCORLQ8N3X6 602 aa29.05■■■□□ 2.24
PVT1-212ENST00000521951 IL25Q9H293 177 aa29.05■■■□□ 2.24
PVT1-212ENST00000521951 ARMT1Q9H993 441 aa29.05■■■□□ 2.24
PVT1-212ENST00000521951 EPHX2P34913 555 aa29.04■■■□□ 2.24
PVT1-212ENST00000521951 HIRAP54198 1017 aaPredicted RBP29.04■■■□□ 2.24
PVT1-212ENST00000521951 RHBDL3P58872 404 aa29.04■■■□□ 2.24
PVT1-212ENST00000521951 CASC1Q6TDU7 716 aa29.04■■■□□ 2.24
PVT1-212ENST00000521951 ZNF526Q8TF50 670 aaPredicted RBP29.04■■■□□ 2.24
PVT1-212ENST00000521951 TAF1DQ9H5J8 278 aaPredicted RBP29.04■■■□□ 2.24
PVT1-212ENST00000521951 TDRD3Q9H7E2 651 aaKnown RBP29.04■■■□□ 2.24
PVT1-212ENST00000521951 RRAGCQ9HB90 399 aa29.04■■■□□ 2.24
PVT1-212ENST00000521951 USP40Q9NVE5 1235 aa29.04■■■□□ 2.24
PVT1-212ENST00000521951 GPAA1O43292 621 aa29.04■■■□□ 2.24
PVT1-212ENST00000521951 SH3RF3Q8TEJ3 882 aaPredicted RBP29.04■■■□□ 2.24
PVT1-212ENST00000521951 STRBPQ96SI9 672 aaKnown RBP29.04■■■□□ 2.24
PVT1-212ENST00000521951 PLCG2P16885 1265 aa29.03■■■□□ 2.24
PVT1-212ENST00000521951 ZNF589Q86UQ0 364 aaPredicted RBP29.03■■■□□ 2.24
PVT1-212ENST00000521951 CERS3Q8IU89 383 aa29.03■■■□□ 2.24
PVT1-212ENST00000521951 ESYT1Q9BSJ8 1104 aa29.03■■■□□ 2.24
PVT1-212ENST00000521951 ECM29Q5VYK3 1845 aa29.02■■■□□ 2.24
PVT1-212ENST00000521951 SGSM2O43147 1006 aa29.02■■■□□ 2.24
PVT1-212ENST00000521951 VEGFAP15692 232 aaPredicted RBP29.02■■■□□ 2.24
PVT1-212ENST00000521951 RAD50Q92878 1312 aa29.02■■■□□ 2.24
PVT1-212ENST00000521951 USP50Q70EL3 339 aaPredicted RBP29.01■■■□□ 2.23
PVT1-212ENST00000521951 NMRK2Q9NPI5 230 aa29.01■■■□□ 2.23
PVT1-212ENST00000521951 ZNF70Q9UC06 446 aaPredicted RBP29.01■■■□□ 2.23
PVT1-212ENST00000521951 SPDYE2Q495Y8 402 aa29■■■□□ 2.23
PVT1-212ENST00000521951 TEX11Q8IYF3 940 aa29■■■□□ 2.23
PVT1-212ENST00000521951 CCDC171Q6TFL3 1326 aa29■■■□□ 2.23
PVT1-212ENST00000521951 CDK5RAP2Q96SN8 1893 aa29■■■□□ 2.23
PVT1-212ENST00000521951 CLRN2A0PK11 232 aa28.99■■■□□ 2.23
PVT1-212ENST00000521951 MYO1BO43795 1136 aa28.99■■■□□ 2.23
PVT1-212ENST00000521951 ASTN2O75129 1339 aaPredicted RBP28.99■■■□□ 2.23
PVT1-212ENST00000521951 CRNKL1Q9BZJ0 848 aaKnown RBP28.99■■■□□ 2.23
PVT1-212ENST00000521951 PRKAB2O43741 272 aa28.99■■■□□ 2.23
PVT1-212ENST00000521951 MFAP1P55081 439 aaKnown RBP28.99■■■□□ 2.23
PVT1-212ENST00000521951 CACNB3P54284 484 aa28.98■■■□□ 2.23
PVT1-212ENST00000521951 C8orf34Q49A92 452 aa28.98■■■□□ 2.23
PVT1-212ENST00000521951 SLC4A4Q9Y6R1 1079 aa28.98■■■□□ 2.23
PVT1-212ENST00000521951 WDHD1O75717 1129 aaPredicted RBP28.97■■■□□ 2.23
PVT1-212ENST00000521951 PNMA8AQ86V59 439 aaPredicted RBP28.97■■■□□ 2.23
PVT1-212ENST00000521951 GNAT2P19087 354 aa28.96■■■□□ 2.23
PVT1-212ENST00000521951 EAPPQ56P03 285 aaPredicted RBP28.96■■■□□ 2.23
PVT1-212ENST00000521951 VPS53Q5VIR6 699 aa28.96■■■□□ 2.23
PVT1-212ENST00000521951 TGFBRAP1Q8WUH2 860 aa28.96■■■□□ 2.23
PVT1-212ENST00000521951 SDR42E1Q8WUS8 393 aa28.96■■■□□ 2.23
PVT1-212ENST00000521951 TMOD2Q9NZR1 351 aa28.96■■■□□ 2.23
PVT1-212ENST00000521951 POLR2AP24928 1970 aaKnown RBP28.96■■■□□ 2.23
PVT1-212ENST00000521951 FOCADQ5VW36 1801 aa28.95■■■□□ 2.23
PVT1-212ENST00000521951 NFIAQ12857 509 aa28.95■■■□□ 2.23
PVT1-212ENST00000521951 IDI2Q9BXS1 227 aa28.95■■■□□ 2.23
PVT1-212ENST00000521951 VEZTQ9HBM0 779 aa28.95■■■□□ 2.23
PVT1-212ENST00000521951 GSG1L2A8MUP6 293 aa28.94■■■□□ 2.22
PVT1-212ENST00000521951 PATL2C9JE40 543 aaKnown RBP28.94■■■□□ 2.22
PVT1-212ENST00000521951 USP5P45974 858 aa28.94■■■□□ 2.22
PVT1-212ENST00000521951 ANGEL2Q5VTE6 544 aaKnown RBP28.94■■■□□ 2.22
PVT1-212ENST00000521951 DDX4Q9NQI0 724 aaKnown RBP28.94■■■□□ 2.22
PVT1-212ENST00000521951 FOXP2O15409 715 aa28.94■■■□□ 2.22
PVT1-212ENST00000521951 HSPD1P10809 573 aaKnown RBP28.94■■■□□ 2.22
PVT1-212ENST00000521951 FKBP1CQ5VVH2 108 aa28.94■■■□□ 2.22
PVT1-212ENST00000521951 GGA3Q9NZ52 723 aa28.94■■■□□ 2.22
PVT1-212ENST00000521951 FAM198AQ9UFP1 575 aa28.94■■■□□ 2.22
PVT1-212ENST00000521951 TCP10L2B9ZVM9 353 aa28.93■■■□□ 2.22
PVT1-212ENST00000521951 YY1P25490 414 aa28.93■■■□□ 2.22
PVT1-212ENST00000521951 MAPKAPK5Q8IW41 473 aa28.93■■■□□ 2.22
PVT1-212ENST00000521951 ZC3H15Q8WU90 426 aaKnown RBP28.93■■■□□ 2.22
PVT1-212ENST00000521951 GPBP1L1Q9HC44 474 aaPredicted RBP28.93■■■□□ 2.22
PVT1-212ENST00000521951 ATP8A2Q9NTI2 1148 aa28.93■■■□□ 2.22
PVT1-212ENST00000521951 APPP05067 770 aa28.92■■■□□ 2.22
PVT1-212ENST00000521951 PICALMQ13492 652 aa28.92■■■□□ 2.22
PVT1-212ENST00000521951 PGAP2Q9UHJ9 254 aa28.92■■■□□ 2.22
PVT1-212ENST00000521951 FLT1P17948 1338 aa28.91■■■□□ 2.22
PVT1-212ENST00000521951 NPM3O75607 178 aaKnown RBP28.91■■■□□ 2.22
PVT1-212ENST00000521951 POTEIP0CG38 1075 aa28.91■■■□□ 2.22
PVT1-212ENST00000521951 POTEJP0CG39 1038 aa28.91■■■□□ 2.22
PVT1-212ENST00000521951 PTH1RQ03431 593 aa28.91■■■□□ 2.22
PVT1-212ENST00000521951 KIAA1211Q6ZU35 1233 aa28.91■■■□□ 2.22
PVT1-212ENST00000521951 DCP1AQ9NPI6 582 aaPredicted RBP28.91■■■□□ 2.22
PVT1-212ENST00000521951 MKRN1Q9UHC7 482 aaKnown RBP28.91■■■□□ 2.22
PVT1-212ENST00000521951 SCAF8Q9UPN6 1271 aaKnown RBP28.91■■■□□ 2.22
PVT1-212ENST00000521951 RPAP1Q9BWH6 1393 aaPredicted RBP28.91■■■□□ 2.22
PVT1-212ENST00000521951 TCP10Q12799 353 aa28.9■■■□□ 2.22
PVT1-212ENST00000521951 IFNL3Q8IZI9 196 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms