RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 RSBN1LQ6PCB5 846 aaPredicted RBP17.97■□□□□ 0.47
SREK1-209ENST00000520953 IFNL3Q8IZI9 196 aa17.97■□□□□ 0.47
SREK1-209ENST00000520953 GAKO14976 1311 aa17.97■□□□□ 0.47
SREK1-209ENST00000520953 BAZ2AQ9UIF9 1905 aaKnown RBP17.97■□□□□ 0.47
SREK1-209ENST00000520953 PATL2C9JE40 543 aaKnown RBP17.97■□□□□ 0.47
SREK1-209ENST00000520953 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
SREK1-209ENST00000520953 VIL1P09327 827 aaKnown RBP17.97■□□□□ 0.47
SREK1-209ENST00000520953 GSTO1P78417 241 aa17.97■□□□□ 0.47
SREK1-209ENST00000520953 STOX1Q6ZVD7 989 aa17.97■□□□□ 0.47
SREK1-209ENST00000520953 KCNB2Q92953 911 aa17.97■□□□□ 0.47
SREK1-209ENST00000520953 UPF3BQ9BZI7 483 aaKnown RBP17.97■□□□□ 0.47
SREK1-209ENST00000520953 NBPF3Q9H094 633 aa17.97■□□□□ 0.47
SREK1-209ENST00000520953 SBF1O95248 1867 aa17.96■□□□□ 0.47
SREK1-209ENST00000520953 CYP2D7A0A087X1C5 515 aa17.96■□□□□ 0.47
SREK1-209ENST00000520953 GPR75-ASB3A0A0A6YYF3 556 aa17.96■□□□□ 0.47
SREK1-209ENST00000520953 SLC4A8Q2Y0W8 1093 aa17.96■□□□□ 0.47
SREK1-209ENST00000520953 NKX2-3Q8TAU0 364 aa17.96■□□□□ 0.47
SREK1-209ENST00000520953 SUGT1Q9Y2Z0 365 aa17.96■□□□□ 0.47
SREK1-209ENST00000520953 ZNF541Q9H0D2 1346 aa17.96■□□□□ 0.47
SREK1-209ENST00000520953 CRKP46108 304 aa17.96■□□□□ 0.46
SREK1-209ENST00000520953 RHBDL3P58872 404 aa17.96■□□□□ 0.46
SREK1-209ENST00000520953 GMLQ99445 158 aa17.96■□□□□ 0.46
SREK1-209ENST00000520953 FKBP1AP62942 108 aaKnown RBP17.95■□□□□ 0.46
SREK1-209ENST00000520953 INCENPQ9NQS7 918 aa17.95■□□□□ 0.46
SREK1-209ENST00000520953 TACC3Q9Y6A5 838 aa17.95■□□□□ 0.46
SREK1-209ENST00000520953 CDK5RAP2Q96SN8 1893 aa17.95■□□□□ 0.46
SREK1-209ENST00000520953 LDHCP07864 332 aa17.94■□□□□ 0.46
SREK1-209ENST00000520953 PPP4CP60510 307 aa17.94■□□□□ 0.46
SREK1-209ENST00000520953 CIAPIN1Q6FI81 312 aa17.94■□□□□ 0.46
SREK1-209ENST00000520953 APOBEC3HQ6NTF7 200 aaKnown RBP17.94■□□□□ 0.46
SREK1-209ENST00000520953 STK11IPQ8N1F8 1099 aa17.94■□□□□ 0.46
SREK1-209ENST00000520953 FAM163AQ96GL9 167 aaPredicted RBP17.94■□□□□ 0.46
SREK1-209ENST00000520953 FZD9O00144 591 aa17.94■□□□□ 0.46
SREK1-209ENST00000520953 JAKMIP1Q96N16 626 aaKnown RBP17.94■□□□□ 0.46
SREK1-209ENST00000520953 CYP2D6P10635 497 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 LMNB1P20700 586 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 TDO2P48775 406 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 ANAPC15P60006 121 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 TBC1D10CQ8IV04 446 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 TGFBRAP1Q8WUH2 860 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 TEKT1Q969V4 418 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 NAPBQ9H115 298 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 DCP1AQ9NPI6 582 aaPredicted RBP17.93■□□□□ 0.46
SREK1-209ENST00000520953 GNAT2P19087 354 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 RBM5P52756 815 aaKnown RBP eCLIP17.93■□□□□ 0.46
SREK1-209ENST00000520953 CACNB3P54284 484 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 CTDSPL2Q05D32 466 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 BECN1Q14457 450 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 MAPKAPK5Q8IW41 473 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 TCEANC2Q96MN5 208 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 CRNKL1Q9BZJ0 848 aaKnown RBP17.93■□□□□ 0.46
SREK1-209ENST00000520953 GJA3Q9Y6H8 435 aa17.93■□□□□ 0.46
SREK1-209ENST00000520953 BAG3O95817 575 aa17.92■□□□□ 0.46
SREK1-209ENST00000520953 GPR162Q16538 588 aa17.92■□□□□ 0.46
SREK1-209ENST00000520953 IL17RAQ96F46 866 aa17.92■□□□□ 0.46
SREK1-209ENST00000520953 RPAP1Q9BWH6 1393 aaPredicted RBP17.92■□□□□ 0.46
SREK1-209ENST00000520953 USP17L8P0C7I0 530 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 CASTP20810 708 aaKnown RBP17.91■□□□□ 0.46
SREK1-209ENST00000520953 ALX1Q15699 326 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 CDC42EP5Q6NZY7 148 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 HHIPL2Q6UWX4 724 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 TEX11Q8IYF3 940 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 DICER1Q9UPY3 1922 aaKnown RBP17.91■□□□□ 0.46
SREK1-209ENST00000520953 E7EWF7 191 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 ZKSCAN1P17029 563 aaPredicted RBP17.91■□□□□ 0.46
SREK1-209ENST00000520953 NEK4P51957 841 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 CFAP100Q494V2 611 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 RNF20Q5VTR2 975 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 SLF2Q8IX21 1173 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 PRMT6Q96LA8 375 aaPredicted RBP17.91■□□□□ 0.46
SREK1-209ENST00000520953 ZDHHC15Q96MV8 337 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 NOL10Q9BSC4 688 aaKnown RBP17.91■□□□□ 0.46
SREK1-209ENST00000520953 DDX4Q9NQI0 724 aaKnown RBP17.91■□□□□ 0.46
SREK1-209ENST00000520953 RNF181Q9P0P0 153 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 MKRN1Q9UHC7 482 aaKnown RBP17.91■□□□□ 0.46
SREK1-209ENST00000520953 SAP30BPQ9UHR5 308 aaKnown RBP17.91■□□□□ 0.46
SREK1-209ENST00000520953 LAMA4Q16363 1823 aa17.91■□□□□ 0.46
SREK1-209ENST00000520953 MINDY4BA8MYZ0 360 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 EGFRP00533 1210 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 USP5P45974 858 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 NFIAQ12857 509 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 RABEP1Q15276 862 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 IMMTQ16891 758 aaKnown RBP17.9■□□□□ 0.46
SREK1-209ENST00000520953 CTR9Q6PD62 1173 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 TMED8Q6PL24 325 aaPredicted RBP17.9■□□□□ 0.46
SREK1-209ENST00000520953 LARP6Q9BRS8 491 aaKnown RBP17.9■□□□□ 0.46
SREK1-209ENST00000520953 USP40Q9NVE5 1235 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 CTNNA3Q9UI47 895 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 USP17L12C9JPN9 530 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 USP17L21D6R901 530 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 ZNF213O14771 459 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 IGSF3O75054 1194 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 WDHD1O75717 1129 aaPredicted RBP17.9■□□□□ 0.46
SREK1-209ENST00000520953 GMPSP49915 693 aaPredicted RBP17.9■□□□□ 0.46
SREK1-209ENST00000520953 PICALMQ13492 652 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 TBC1D2Q9BYX2 928 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 NACAP1Q9BZK3 213 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 SERPINA10Q9UK55 444 aa17.9■□□□□ 0.46
SREK1-209ENST00000520953 EIF6P56537 245 aaKnown RBP17.89■□□□□ 0.45
SREK1-209ENST00000520953 TSGA10IPQ3SY00 556 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms