RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 PSMG3-AS1Q96PY0 264 aa6.98□□□□□ -1.29
CTNNA1-218ENST00000519768 ZIC5Q96T25 663 aa6.98□□□□□ -1.29
CTNNA1-218ENST00000519768 CUEDC1Q9NWM3 386 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-218ENST00000519768 TAF1LQ8IZX4 1826 aa6.98□□□□□ -1.29
CTNNA1-218ENST00000519768 SBF1O95248 1867 aa6.98□□□□□ -1.29
CTNNA1-218ENST00000519768 MMP10P09238 476 aa6.97□□□□□ -1.29
CTNNA1-218ENST00000519768 VSIG8P0DPA2 414 aa6.97□□□□□ -1.29
CTNNA1-218ENST00000519768 HIF1AQ16665 826 aa6.97□□□□□ -1.29
CTNNA1-218ENST00000519768 EFHC2Q5JST6 749 aa6.97□□□□□ -1.29
CTNNA1-218ENST00000519768 BICDL1Q6ZP65 573 aa6.97□□□□□ -1.29
CTNNA1-218ENST00000519768 SMC1BQ8NDV3 1235 aa6.97□□□□□ -1.29
CTNNA1-218ENST00000519768 TRAIPQ9BWF2 469 aa6.97□□□□□ -1.29
CTNNA1-218ENST00000519768 NUCKS1Q9H1E3 243 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-218ENST00000519768 RUBCNLQ9H714 662 aa6.97□□□□□ -1.29
CTNNA1-218ENST00000519768 RNF181Q9P0P0 153 aa6.97□□□□□ -1.29
CTNNA1-218ENST00000519768 UBR3Q6ZT12 1888 aa6.96□□□□□ -1.29
CTNNA1-218ENST00000519768 RGPD2P0DJD1 1756 aa6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 A0A1W2PNR3 127 aa6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 CCDC85CA6NKD9 419 aa6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 MLLT1Q03111 559 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 SV2AQ7L0J3 742 aa6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 LINC00116Q8NCU8 138 aa6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 RHPN1Q8TCX5 695 aa6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 ZNF837Q96EG3 531 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 PRDM10Q9NQV6 1147 aa6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 ANKIB1Q9P2G1 1089 aa6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 C5P01031 1676 aa6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 KIAA1210Q9ULL0 1709 aa6.96□□□□□ -1.3
CTNNA1-218ENST00000519768 BRD1O95696 1058 aa6.95□□□□□ -1.3
CTNNA1-218ENST00000519768 THBS1P07996 1170 aa6.95□□□□□ -1.3
CTNNA1-218ENST00000519768 HSPA8P11142 646 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-218ENST00000519768 FIGNL1Q6PIW4 674 aa6.95□□□□□ -1.3
CTNNA1-218ENST00000519768 NME9Q86XW9 330 aa6.95□□□□□ -1.3
CTNNA1-218ENST00000519768 VWA5B2Q8N398 1253 aa6.95□□□□□ -1.3
CTNNA1-218ENST00000519768 KCNH5Q8NCM2 988 aa6.95□□□□□ -1.3
CTNNA1-218ENST00000519768 BRCA1P38398 1863 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-218ENST00000519768 PKD1L3Q7Z443 1732 aa6.95□□□□□ -1.3
CTNNA1-218ENST00000519768 KIF13BQ9NQT8 1826 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 C4BP0C0L5 1744 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 CHRNA5P30532 468 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 ITPK1Q13572 414 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 UBAP2LQ14157 1087 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 COX20Q5RI15 118 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 SAMD5Q5TGI4 173 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 C16orf46Q6P387 395 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 FOXR1Q6PIV2 292 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 CAPN12Q6ZSI9 719 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 USHBP1Q8N6Y0 703 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 MKNK1Q9BUB5 465 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 NEUROD4Q9HD90 331 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 MTMR7Q9Y216 660 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 USP47Q96K76 1375 aa6.94□□□□□ -1.3
CTNNA1-218ENST00000519768 C10orf71Q711Q0 1435 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 MEGF6O75095 1541 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 CDC14CA4D256 554 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 PDIA4P13667 645 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 ARID4AP29374 1257 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 TGFB2P61812 414 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 C11orf91Q3C1V1 193 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 IER5Q5VY09 327 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 MPRIPQ6WCQ1 1025 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 ZCRB1Q8TBF4 217 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 DCAF5Q96JK2 942 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 SUSD3Q96L08 255 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 ZCCHC2Q9C0B9 1178 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 LRFN2Q9ULH4 789 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 PCDHGC4Q9Y5F7 938 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 GJA3Q9Y6H8 435 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 KDM2BQ8NHM5 1336 aa6.93□□□□□ -1.3
CTNNA1-218ENST00000519768 CTCFP49711 727 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 TRIM26Q12899 539 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 NAA30Q147X3 362 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 LRRC69Q6ZNQ3 347 aa6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 FLAD1Q8NFF5 587 aa6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 GTPBP3Q969Y2 492 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 TRERF1Q96PN7 1200 aa6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 CFHR5Q9BXR6 569 aa6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 SAP130Q9H0E3 1048 aa6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 NDFIP2Q9NV92 336 aa6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 SEPT3Q9UH03 358 aa6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 PALLDQ8WX93 1383 aa6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 LTN1O94822 1766 aa6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 MAP2P11137 1827 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 CCDC88AQ3V6T2 1871 aa6.92□□□□□ -1.3
CTNNA1-218ENST00000519768 FAM208AQ9UK61 1670 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 GLTPD2A6NH11 291 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 TGFBR3LH3BV60 316 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 FAM157BP0CG42 384 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 VEGFAP15692 232 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 SCNN1AP37088 669 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 DGKZQ13574 1117 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 NBPF6Q5VWK0 638 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 GPAT2Q6NUI2 795 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 ZNF280CQ8ND82 737 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 PIGBQ92521 554 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 NBPF4Q96M43 638 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 ATXN7L1Q9ULK2 861 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 PHF24Q9UPV7 400 aa6.91□□□□□ -1.3
CTNNA1-218ENST00000519768 VIRMAQ69YN4 1812 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms