RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 HPS5Q9UPZ3 1129 aa21.72■■□□□ 1.07
FAM49B-214ENST00000519540 CHD4Q14839 1912 aa21.72■■□□□ 1.07
FAM49B-214ENST00000519540 ATP2B4P23634 1241 aa21.72■■□□□ 1.07
FAM49B-214ENST00000519540 PRDX5P30044 214 aa21.72■■□□□ 1.07
FAM49B-214ENST00000519540 DNM1Q05193 864 aaKnown RBP21.72■■□□□ 1.07
FAM49B-214ENST00000519540 TMED8Q6PL24 325 aaPredicted RBP21.72■■□□□ 1.07
FAM49B-214ENST00000519540 MFSD6Q6ZSS7 791 aa21.72■■□□□ 1.07
FAM49B-214ENST00000519540 STAG1Q8WVM7 1258 aa21.72■■□□□ 1.07
FAM49B-214ENST00000519540 TMEM87BQ96K49 555 aa21.72■■□□□ 1.07
FAM49B-214ENST00000519540 RGS17Q9UGC6 210 aaPredicted RBP21.72■■□□□ 1.07
FAM49B-214ENST00000519540 SALL1Q9NSC2 1324 aa21.71■■□□□ 1.07
FAM49B-214ENST00000519540 SH2B2O14492 632 aaPredicted RBP21.71■■□□□ 1.07
FAM49B-214ENST00000519540 ZNF804AQ7Z570 1209 aa21.71■■□□□ 1.07
FAM49B-214ENST00000519540 BRIP1Q9BX63 1249 aa21.71■■□□□ 1.07
FAM49B-214ENST00000519540 KRT23Q9C075 422 aa21.71■■□□□ 1.07
FAM49B-214ENST00000519540 TNS1Q9HBL0 1735 aaKnown RBP21.71■■□□□ 1.07
FAM49B-214ENST00000519540 L1TD1Q5T7N2 865 aaKnown RBP21.7■■□□□ 1.06
FAM49B-214ENST00000519540 SPTY2D1Q68D10 685 aaPredicted RBP21.7■■□□□ 1.06
FAM49B-214ENST00000519540 FERMT3Q86UX7 667 aa21.7■■□□□ 1.06
FAM49B-214ENST00000519540 IGDCC4Q8TDY8 1250 aa21.7■■□□□ 1.06
FAM49B-214ENST00000519540 ZSWIM5Q9P217 1185 aa21.7■■□□□ 1.06
FAM49B-214ENST00000519540 NRXN2Q9P2S2 1712 aa21.7■■□□□ 1.06
FAM49B-214ENST00000519540 GOLGA8BA8MQT2 603 aa21.7■■□□□ 1.06
FAM49B-214ENST00000519540 GADD45BO75293 160 aaPredicted RBP21.7■■□□□ 1.06
FAM49B-214ENST00000519540 WDR66Q8TBY9 1149 aa21.7■■□□□ 1.06
FAM49B-214ENST00000519540 GPR101Q96P66 508 aaPredicted RBP21.7■■□□□ 1.06
FAM49B-214ENST00000519540 PODXL2Q9NZ53 605 aa21.7■■□□□ 1.06
FAM49B-214ENST00000519540 GGA1Q9UJY5 639 aa21.7■■□□□ 1.06
FAM49B-214ENST00000519540 ISY1Q9ULR0 285 aaKnown RBP21.7■■□□□ 1.06
FAM49B-214ENST00000519540 JAG2Q9Y219 1238 aa21.7■■□□□ 1.06
FAM49B-214ENST00000519540 ANKRD31Q8N7Z5 1873 aa21.69■■□□□ 1.06
FAM49B-214ENST00000519540 KDM4AO75164 1064 aa21.69■■□□□ 1.06
FAM49B-214ENST00000519540 UFL1O94874 794 aa21.69■■□□□ 1.06
FAM49B-214ENST00000519540 PPARAQ07869 468 aa21.69■■□□□ 1.06
FAM49B-214ENST00000519540 ANAPC4Q9UJX5 808 aa21.69■■□□□ 1.06
FAM49B-214ENST00000519540 KIF3AQ9Y496 699 aa21.69■■□□□ 1.06
FAM49B-214ENST00000519540 CCDC88AQ3V6T2 1871 aa21.69■■□□□ 1.06
FAM49B-214ENST00000519540 DHX16O60231 1041 aaKnown RBP21.68■■□□□ 1.06
FAM49B-214ENST00000519540 IGSF3O75054 1194 aa21.68■■□□□ 1.06
FAM49B-214ENST00000519540 H3BQV1 296 aa21.68■■□□□ 1.06
FAM49B-214ENST00000519540 IFFO2Q5TF58 517 aa21.68■■□□□ 1.06
FAM49B-214ENST00000519540 TMC4Q7Z404 712 aa21.68■■□□□ 1.06
FAM49B-214ENST00000519540 MAST2Q6P0Q8 1798 aa21.68■■□□□ 1.06
FAM49B-214ENST00000519540 ZSCAN23Q3MJ62 389 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 GIMAP6Q6P9H5 292 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 POTEAQ6S8J7 498 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 GAS2L3Q86XJ1 694 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 RNF41Q9H4P4 317 aaPredicted RBP21.67■■□□□ 1.06
FAM49B-214ENST00000519540 RBM27Q9P2N5 1060 aaKnown RBP21.67■■□□□ 1.06
FAM49B-214ENST00000519540 MINDY4BA8MYZ0 360 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 FIBPO43427 364 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 FDPSP14324 419 aaKnown RBP21.67■■□□□ 1.06
FAM49B-214ENST00000519540 CSPP1Q1MSJ5 1256 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 SGMS1Q86VZ5 419 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 SP8Q8IXZ3 490 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 LY9Q9HBG7 655 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 SENP2Q9HC62 589 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 CD209Q9NNX6 404 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 AATFQ9NY61 560 aaKnown RBP eCLIP21.67■■□□□ 1.06
FAM49B-214ENST00000519540 TMEM63CQ9P1W3 806 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 POLLQ9UGP5 575 aa21.67■■□□□ 1.06
FAM49B-214ENST00000519540 RGPD3A6NKT7 1758 aaPredicted RBP21.66■■□□□ 1.06
FAM49B-214ENST00000519540 RGPD4Q7Z3J3 1758 aa21.66■■□□□ 1.06
FAM49B-214ENST00000519540 MMP10P09238 476 aa21.66■■□□□ 1.06
FAM49B-214ENST00000519540 SRGNP10124 158 aa21.66■■□□□ 1.06
FAM49B-214ENST00000519540 LIFRP42702 1097 aa21.66■■□□□ 1.06
FAM49B-214ENST00000519540 TMEM67Q5HYA8 995 aa21.66■■□□□ 1.06
FAM49B-214ENST00000519540 FAM173BQ6P4H8 233 aa21.66■■□□□ 1.06
FAM49B-214ENST00000519540 DZIP1Q86YF9 867 aaKnown RBP21.66■■□□□ 1.06
FAM49B-214ENST00000519540 TBC1D16Q8TBP0 767 aa21.66■■□□□ 1.06
FAM49B-214ENST00000519540 PPEF1O14829 653 aaPredicted RBP21.65■■□□□ 1.06
FAM49B-214ENST00000519540 LDHBP07195 334 aaKnown RBP21.65■■□□□ 1.06
FAM49B-214ENST00000519540 ZNF445P59923 1031 aa21.65■■□□□ 1.06
FAM49B-214ENST00000519540 RESTQ13127 1097 aa21.65■■□□□ 1.06
FAM49B-214ENST00000519540 RRP12Q5JTH9 1297 aaKnown RBP21.65■■□□□ 1.06
FAM49B-214ENST00000519540 RAB11FIP4Q86YS3 637 aa21.65■■□□□ 1.06
FAM49B-214ENST00000519540 PARP3Q9Y6F1 533 aa21.65■■□□□ 1.06
FAM49B-214ENST00000519540 LRRC37AA6NMS7 1700 aa21.65■■□□□ 1.06
FAM49B-214ENST00000519540 IFIT3O14879 490 aaKnown RBP21.65■■□□□ 1.06
FAM49B-214ENST00000519540 PPFIA3O75145 1194 aa21.65■■□□□ 1.06
FAM49B-214ENST00000519540 IL1R1P14778 569 aa21.65■■□□□ 1.06
FAM49B-214ENST00000519540 KRT85P78386 507 aa21.65■■□□□ 1.06
FAM49B-214ENST00000519540 APOA5Q6Q788 366 aa21.65■■□□□ 1.06
FAM49B-214ENST00000519540 CRNKL1Q9BZJ0 848 aaKnown RBP21.65■■□□□ 1.06
FAM49B-214ENST00000519540 ZSCAN16Q9H4T2 348 aaPredicted RBP21.65■■□□□ 1.06
FAM49B-214ENST00000519540 TOMM22Q9NS69 142 aa21.65■■□□□ 1.06
FAM49B-214ENST00000519540 UBE2HP62256 183 aa21.64■■□□□ 1.05
FAM49B-214ENST00000519540 CTR9Q6PD62 1173 aa21.64■■□□□ 1.05
FAM49B-214ENST00000519540 STK11IPQ8N1F8 1099 aa21.64■■□□□ 1.05
FAM49B-214ENST00000519540 MTA3Q9BTC8 594 aa21.64■■□□□ 1.05
FAM49B-214ENST00000519540 ATP6V0A2Q9Y487 856 aa21.64■■□□□ 1.05
FAM49B-214ENST00000519540 KIAA1551Q9HCM1 1747 aa21.64■■□□□ 1.05
FAM49B-214ENST00000519540 BAZ2AQ9UIF9 1905 aaKnown RBP21.64■■□□□ 1.05
FAM49B-214ENST00000519540 CPLX1O14810 134 aa21.63■■□□□ 1.05
FAM49B-214ENST00000519540 NPR1P16066 1061 aa21.63■■□□□ 1.05
FAM49B-214ENST00000519540 MRE11P49959 708 aa21.63■■□□□ 1.05
FAM49B-214ENST00000519540 LTBP1Q14766 1721 aa21.63■■□□□ 1.05
FAM49B-214ENST00000519540 SMIM22K7EJ46 135 aa21.63■■□□□ 1.05
FAM49B-214ENST00000519540 XRCC6P12956 609 aaKnown RBP eCLIP21.63■■□□□ 1.05
FAM49B-214ENST00000519540 PDE6BP35913 854 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms