RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 AKR1B10O60218 316 aa9.65□□□□□ -0.87
PCM1-212ENST00000519253 TOB2Q14106 344 aaPredicted RBP9.65□□□□□ -0.87
PCM1-212ENST00000519253 LDHAL6AQ6ZMR3 332 aa9.65□□□□□ -0.87
PCM1-212ENST00000519253 CACNA2D4Q7Z3S7 1137 aa9.65□□□□□ -0.87
PCM1-212ENST00000519253 TICAM2Q86XR7 235 aa9.65□□□□□ -0.87
PCM1-212ENST00000519253 OTUD6BQ8N6M0 293 aa9.65□□□□□ -0.87
PCM1-212ENST00000519253 IQUBQ8NA54 791 aa9.65□□□□□ -0.87
PCM1-212ENST00000519253 USP27XA6NNY8 438 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 SEC31AO94979 1220 aaKnown RBP9.64□□□□□ -0.87
PCM1-212ENST00000519253 TSGA10IPQ3SY00 556 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 B4GALNT4Q76KP1 1039 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 ARFGAP2Q8N6H7 521 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 IPO4Q8TEX9 1081 aaKnown RBP9.64□□□□□ -0.87
PCM1-212ENST00000519253 APPBP2Q92624 585 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 USP42Q9H9J4 1324 aaKnown RBP9.64□□□□□ -0.87
PCM1-212ENST00000519253 ANKRD18BA2A2Z9 1011 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 SLFN14P0C7P3 912 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 CYP2C19P33261 490 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 SLC9C2Q5TAH2 1124 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 VSTM4Q8IW00 320 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 BMP2KQ9NSY1 1161 aaPredicted RBP9.64□□□□□ -0.87
PCM1-212ENST00000519253 WWC3Q9ULE0 1092 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 RRP15Q9Y3B9 282 aaKnown RBP9.64□□□□□ -0.87
PCM1-212ENST00000519253 CEP152O94986 1710 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 CCDC122Q5T0U0 273 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 ZNF589Q86UQ0 364 aaPredicted RBP9.64□□□□□ -0.87
PCM1-212ENST00000519253 ADGRB2O60241 1585 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 UBA7P41226 1012 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 ADKP55263 362 aaKnown RBP9.64□□□□□ -0.87
PCM1-212ENST00000519253 NLRP5P59047 1200 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 ZC3H6P61129 1189 aaKnown RBP9.64□□□□□ -0.87
PCM1-212ENST00000519253 PNOCQ13519 176 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 PATL2C9JE40 543 aaKnown RBP9.64□□□□□ -0.87
PCM1-212ENST00000519253 SLC39A6Q13433 755 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 NYAP1Q6ZVC0 841 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 ZBTB3Q9H5J0 574 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 NEO1Q92859 1461 aa9.64□□□□□ -0.87
PCM1-212ENST00000519253 ATF3P18847 181 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 VAV2P52735 878 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 RBM33Q96EV2 1170 aaKnown RBP9.63□□□□□ -0.87
PCM1-212ENST00000519253 PARD6BQ9BYG5 372 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 MINDY4BA8MYZ0 360 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 POLR2DO15514 142 aaKnown RBP9.63□□□□□ -0.87
PCM1-212ENST00000519253 TIMM10P62072 90 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 CCZ1BP86790 482 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 CCZ1P86791 482 aaPredicted RBP9.63□□□□□ -0.87
PCM1-212ENST00000519253 UBXN1Q04323 297 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 SYNRGQ9UMZ2 1314 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 CCDC194A0A1B0GVG4 234 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 GOLGA6CA6NDK9 693 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 PPP6R2O75170 966 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 GOLGA6DP0CG33 693 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 HSPD1P10809 573 aaKnown RBP9.63□□□□□ -0.87
PCM1-212ENST00000519253 AMPD3Q01432 767 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 SOGA3Q5TF21 947 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 DIS3L2Q8IYB7 885 aaKnown RBP9.63□□□□□ -0.87
PCM1-212ENST00000519253 CCDC42Q96M95 316 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 PDE11AQ9HCR9 933 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 GOLGA6AQ9NYA3 693 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 CLIC4Q9Y696 253 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 CARMIL3Q8ND23 1372 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 NEURL1BA8MQ27 555 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 SLC5A1P13866 664 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 CCDC96Q2M329 555 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 CC2D1AQ6P1N0 951 aaPredicted RBP9.63□□□□□ -0.87
PCM1-212ENST00000519253 FTOQ9C0B1 505 aaKnown RBP eCLIP9.63□□□□□ -0.875e-6■□□□□ 9.9
PCM1-212ENST00000519253 MYO1AQ9UBC5 1043 aa9.63□□□□□ -0.87
PCM1-212ENST00000519253 MATR3P43243 847 aaKnown RBP eCLIP9.62□□□□□ -0.874e-7■■■■□ 19.4
PCM1-212ENST00000519253 PPFIA1Q13136 1202 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 SEC62Q99442 399 aaKnown RBP9.62□□□□□ -0.87
PCM1-212ENST00000519253 DESI2Q9BSY9 194 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 PCDHA5Q9Y5H7 936 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 RBM43Q6ZSC3 357 aaKnown RBP9.62□□□□□ -0.87
PCM1-212ENST00000519253 ANKLE2Q86XL3 938 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 TBX22Q9Y458 520 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 SALL3Q9BXA9 1300 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 MYO1CO00159 1063 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 DEXIO95424 95 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 ERCC5P28715 1186 aaPredicted RBP9.62□□□□□ -0.87
PCM1-212ENST00000519253 INPP5BP32019 993 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 KRT9P35527 623 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 TDRD12Q587J7 1177 aaKnown RBP9.62□□□□□ -0.87
PCM1-212ENST00000519253 ESR2Q92731 530 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 DBNLQ9UJU6 430 aaKnown RBP9.62□□□□□ -0.87
PCM1-212ENST00000519253 STARD3NLO95772 234 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 IRX5P78411 483 aaPredicted RBP9.62□□□□□ -0.87
PCM1-212ENST00000519253 HLTFQ14527 1009 aaKnown RBP eCLIP9.62□□□□□ -0.875e-7■□□□□ 10.4
PCM1-212ENST00000519253 ZNF790Q6PG37 636 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 FMR1NBQ8N0W7 255 aaPredicted RBP9.62□□□□□ -0.87
PCM1-212ENST00000519253 CAPZA3Q96KX2 299 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 TSG101Q99816 390 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 TCP11L1Q9NUJ3 509 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 NF2P35240 595 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 MAATS1Q7Z4T9 603 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 LRRC59Q96AG4 307 aaKnown RBP9.62□□□□□ -0.87
PCM1-212ENST00000519253 TSGA10Q9BZW7 698 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 ADAM21Q9UKJ8 722 aa9.62□□□□□ -0.87
PCM1-212ENST00000519253 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
PCM1-212ENST00000519253 A0A087WWV3 80 aa9.61□□□□□ -0.87
PCM1-212ENST00000519253 GOLGA6BA6NDN3 693 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms