RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 VEZTQ9HBM0 779 aa13.15□□□□□ -0.3
PDGFRB-203ENST00000517660 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
PDGFRB-203ENST00000517660 CRKP46108 304 aa13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 GRIK5Q16478 980 aa13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 ATP2B3Q16720 1220 aa13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 DZIP1LQ8IYY4 767 aaKnown RBP13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 MS4A4AQ96JQ5 239 aa13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 ZNF70Q9UC06 446 aaPredicted RBP13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 PA2G4Q9UQ80 394 aaKnown RBP13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 STXBP5LQ9Y2K9 1186 aa13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 SUGT1Q9Y2Z0 365 aa13.14□□□□□ -0.31
PDGFRB-203ENST00000517660 AOX1Q06278 1338 aa13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 COL1A1P02452 1464 aaPredicted RBP13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 MTX1Q13505 466 aa13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 TNFAIP1Q13829 316 aa13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 RASA3Q14644 834 aa13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 DEFB123Q8N688 67 aa13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 CLUAP1Q96AJ1 413 aa13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 TDRD3Q9H7E2 651 aaKnown RBP13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 GNL3LQ9NVN8 582 aaKnown RBP13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 TNNQ9UQP3 1299 aa13.13□□□□□ -0.31
PDGFRB-203ENST00000517660 UNCXA6NJT0 531 aa13.12□□□□□ -0.31
PDGFRB-203ENST00000517660 SRGAP3O43295 1099 aa13.12□□□□□ -0.31
PDGFRB-203ENST00000517660 GNAI2P04899 355 aa13.12□□□□□ -0.31
PDGFRB-203ENST00000517660 NBPF12Q5TAG4 269 aaPredicted RBP13.12□□□□□ -0.31
PDGFRB-203ENST00000517660 BRI3BPQ8WY22 251 aa13.12□□□□□ -0.31
PDGFRB-203ENST00000517660 TEKT1Q969V4 418 aa13.12□□□□□ -0.31
PDGFRB-203ENST00000517660 MTMR10Q9NXD2 777 aa13.12□□□□□ -0.31
PDGFRB-203ENST00000517660 STAP2Q9UGK3 403 aa13.12□□□□□ -0.31
PDGFRB-203ENST00000517660 MUC3AQ02505 3323 aa13.12□□□□□ -0.31
PDGFRB-203ENST00000517660 CTGFP29279 349 aa13.11□□□□□ -0.31
PDGFRB-203ENST00000517660 TNNI2P48788 182 aa13.11□□□□□ -0.31
PDGFRB-203ENST00000517660 ZDHHC15Q96MV8 337 aa13.11□□□□□ -0.31
PDGFRB-203ENST00000517660 MAST3O60307 1309 aa13.11□□□□□ -0.31
PDGFRB-203ENST00000517660 TCP10L2B9ZVM9 353 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 SEMA3EO15041 775 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 ZBTB22O15209 634 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 USP2O75604 605 aaPredicted RBP13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 GJA8P48165 433 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 IREB2P48200 963 aaKnown RBP13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 OTUD7BQ6GQQ9 843 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 GPR153Q6NV75 609 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 HHIPL2Q6UWX4 724 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 AKAP2Q9Y2D5 859 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
PDGFRB-203ENST00000517660 OTOFQ9HC10 1997 aa13.09□□□□□ -0.31
PDGFRB-203ENST00000517660 TIMM10P62072 90 aa13.09□□□□□ -0.31
PDGFRB-203ENST00000517660 APOBEC3HQ6NTF7 200 aaKnown RBP13.09□□□□□ -0.31
PDGFRB-203ENST00000517660 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDGFRB-203ENST00000517660 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
PDGFRB-203ENST00000517660 TEPSINQ96N21 525 aa13.09□□□□□ -0.31
PDGFRB-203ENST00000517660 PRDM6Q9NQX0 595 aa13.09□□□□□ -0.31
PDGFRB-203ENST00000517660 DENND2AQ9ULE3 1009 aa13.09□□□□□ -0.31
PDGFRB-203ENST00000517660 NR2E3Q9Y5X4 410 aa13.09□□□□□ -0.31
PDGFRB-203ENST00000517660 PRUNE2Q8WUY3 3088 aa13.09□□□□□ -0.31
PDGFRB-203ENST00000517660 LAMA2P24043 3122 aaKnown RBP13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 A0A1B0GUL6 1792 aa13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 ADORA1P30542 326 aa13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 PHKA1P46020 1223 aa13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 LACTBP83111 547 aaPredicted RBP13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 TFCP2Q12800 502 aa13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 G3BP1Q13283 466 aaKnown RBP eCLIP13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 TAF1CQ15572 869 aaPredicted RBP13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 FKBP1CQ5VVH2 108 aa13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 CCDC102BQ68D86 513 aa13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 GDF15Q99988 308 aa13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 HTATIP2Q9BUP3 242 aa13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 TMOD2Q9NZR1 351 aa13.08□□□□□ -0.32
PDGFRB-203ENST00000517660 LDHBP07195 334 aaKnown RBP13.07□□□□□ -0.32
PDGFRB-203ENST00000517660 GJB1P08034 283 aa13.07□□□□□ -0.32
PDGFRB-203ENST00000517660 FAM83AQ86UY5 434 aa13.07□□□□□ -0.32
PDGFRB-203ENST00000517660 FTSJ3Q8IY81 847 aaKnown RBP13.07□□□□□ -0.32
PDGFRB-203ENST00000517660 ANKRD13AQ8IZ07 590 aa13.07□□□□□ -0.32
PDGFRB-203ENST00000517660 OPTNQ96CV9 577 aa13.07□□□□□ -0.32
PDGFRB-203ENST00000517660 TMEM39BQ9GZU3 492 aa13.07□□□□□ -0.32
PDGFRB-203ENST00000517660 SALL1Q9NSC2 1324 aa13.07□□□□□ -0.32
PDGFRB-203ENST00000517660 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
PDGFRB-203ENST00000517660 A0A1B0GUL7 405 aa13.06□□□□□ -0.32
PDGFRB-203ENST00000517660 CCL5P13501 91 aa13.06□□□□□ -0.32
PDGFRB-203ENST00000517660 CACNB3P54284 484 aa13.06□□□□□ -0.32
PDGFRB-203ENST00000517660 ATP8B2P98198 1209 aa13.06□□□□□ -0.32
PDGFRB-203ENST00000517660 MVPQ14764 893 aaKnown RBP13.06□□□□□ -0.32
PDGFRB-203ENST00000517660 ZGPATQ8N5A5 531 aaKnown RBP13.06□□□□□ -0.32
PDGFRB-203ENST00000517660 XAGE2Q96GT9 111 aa13.06□□□□□ -0.32
PDGFRB-203ENST00000517660 ELP3Q9H9T3 547 aa13.06□□□□□ -0.32
PDGFRB-203ENST00000517660 ZFYVE28Q9HCC9 887 aa13.06□□□□□ -0.32
PDGFRB-203ENST00000517660 PRDX5P30044 214 aa13.05□□□□□ -0.32
PDGFRB-203ENST00000517660 BMP8BP34820 402 aa13.05□□□□□ -0.32
PDGFRB-203ENST00000517660 MAP3K9P80192 1104 aa13.05□□□□□ -0.32
PDGFRB-203ENST00000517660 ARHGEF6Q15052 776 aa13.05□□□□□ -0.32
PDGFRB-203ENST00000517660 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.05□□□□□ -0.32
PDGFRB-203ENST00000517660 CDAN1Q8IWY9 1227 aa13.05□□□□□ -0.32
PDGFRB-203ENST00000517660 HOOK2Q96ED9 719 aa13.05□□□□□ -0.32
PDGFRB-203ENST00000517660 NEUROD6Q96NK8 337 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms