RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 MIGA1Q8NAN2 632 aa11.96□□□□□ -0.49
CLN8-202ENST00000517514 ADARB2Q9NS39 739 aaKnown RBP11.96□□□□□ -0.49
CLN8-202ENST00000517514 BAZ2AQ9UIF9 1905 aaKnown RBP11.96□□□□□ -0.5
CLN8-202ENST00000517514 SIPA1L1O43166 1804 aa11.95□□□□□ -0.5
CLN8-202ENST00000517514 H7C1D1 291 aa11.95□□□□□ -0.5
CLN8-202ENST00000517514 BTDP43251 543 aa11.95□□□□□ -0.5
CLN8-202ENST00000517514 DLGAP5Q15398 846 aa11.95□□□□□ -0.5
CLN8-202ENST00000517514 TICAM2Q86XR7 235 aa11.95□□□□□ -0.5
CLN8-202ENST00000517514 LCORLQ8N3X6 602 aa11.95□□□□□ -0.5
CLN8-202ENST00000517514 APPBP2Q92624 585 aa11.95□□□□□ -0.5
CLN8-202ENST00000517514 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLN8-202ENST00000517514 TDRD3Q9H7E2 651 aaKnown RBP11.95□□□□□ -0.5
CLN8-202ENST00000517514 PGAP2Q9UHJ9 254 aa11.95□□□□□ -0.5
CLN8-202ENST00000517514 HDAC9Q9UKV0 1011 aa11.95□□□□□ -0.5
CLN8-202ENST00000517514 NAV1Q8NEY1 1877 aa11.95□□□□□ -0.5
CLN8-202ENST00000517514 MYH1P12882 1939 aa11.94□□□□□ -0.5
CLN8-202ENST00000517514 KIF3CO14782 793 aa11.94□□□□□ -0.5
CLN8-202ENST00000517514 WDHD1O75717 1129 aaPredicted RBP11.94□□□□□ -0.5
CLN8-202ENST00000517514 LDHCP07864 332 aa11.94□□□□□ -0.5
CLN8-202ENST00000517514 ZFYP08048 801 aaPredicted RBP11.94□□□□□ -0.5
CLN8-202ENST00000517514 VEGFAP15692 232 aaPredicted RBP11.94□□□□□ -0.5
CLN8-202ENST00000517514 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
CLN8-202ENST00000517514 GSTO1P78417 241 aa11.94□□□□□ -0.5
CLN8-202ENST00000517514 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
CLN8-202ENST00000517514 TMED8Q6PL24 325 aaPredicted RBP11.94□□□□□ -0.5
CLN8-202ENST00000517514 CCDC129Q6ZRS4 1044 aa11.94□□□□□ -0.5
CLN8-202ENST00000517514 ZNF589Q86UQ0 364 aaPredicted RBP11.94□□□□□ -0.5
CLN8-202ENST00000517514 OGFOD1Q8N543 542 aa11.94□□□□□ -0.5
CLN8-202ENST00000517514 SH3RF3Q8TEJ3 882 aaPredicted RBP11.94□□□□□ -0.5
CLN8-202ENST00000517514 ARMT1Q9H993 441 aa11.94□□□□□ -0.5
CLN8-202ENST00000517514 DDX4Q9NQI0 724 aaKnown RBP11.94□□□□□ -0.5
CLN8-202ENST00000517514 AATFQ9NY61 560 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLN8-202ENST00000517514 ZNF70Q9UC06 446 aaPredicted RBP11.94□□□□□ -0.5
CLN8-202ENST00000517514 SCAF8Q9UPN6 1271 aaKnown RBP11.94□□□□□ -0.5
CLN8-202ENST00000517514 CNTNAP1P78357 1384 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 CLRN2A0PK11 232 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 IQCA1LA6NCM1 817 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 PRKAB2O43741 272 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 MBD4O95243 580 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 YY1P25490 414 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 RBM5P52756 815 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLN8-202ENST00000517514 CACNB3P54284 484 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 NFIAQ12857 509 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 ZSCAN25Q6NSZ9 544 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 DLK2Q6UY11 383 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 USP50Q70EL3 339 aaPredicted RBP11.93□□□□□ -0.5
CLN8-202ENST00000517514 STRBPQ96SI9 672 aaKnown RBP11.93□□□□□ -0.5
CLN8-202ENST00000517514 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
CLN8-202ENST00000517514 MKRN1Q9UHC7 482 aaKnown RBP11.93□□□□□ -0.5
CLN8-202ENST00000517514 MAGEB6P1A0A0J9YX57 407 aa11.92□□□□□ -0.5
CLN8-202ENST00000517514 VPS53Q5VIR6 699 aa11.92□□□□□ -0.5
CLN8-202ENST00000517514 CWC27Q6UX04 472 aaKnown RBP11.92□□□□□ -0.5
CLN8-202ENST00000517514 ZFPM1Q8IX07 1006 aa11.92□□□□□ -0.5
CLN8-202ENST00000517514 SLF2Q8IX21 1173 aa11.92□□□□□ -0.5
CLN8-202ENST00000517514 ZNF784Q8NCA9 323 aaPredicted RBP11.92□□□□□ -0.5
CLN8-202ENST00000517514 HELLSQ9NRZ9 838 aa11.92□□□□□ -0.5
CLN8-202ENST00000517514 USP40Q9NVE5 1235 aa11.92□□□□□ -0.5
CLN8-202ENST00000517514 GPAA1O43292 621 aa11.91□□□□□ -0.5
CLN8-202ENST00000517514 EVX2Q03828 476 aa11.91□□□□□ -0.5
CLN8-202ENST00000517514 MCMDC2Q4G0Z9 681 aa11.91□□□□□ -0.5
CLN8-202ENST00000517514 ANGEL2Q5VTE6 544 aaKnown RBP11.91□□□□□ -0.5
CLN8-202ENST00000517514 SH3BP5LQ7L8J4 393 aa11.91□□□□□ -0.5
CLN8-202ENST00000517514 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
CLN8-202ENST00000517514 IDI2Q9BXS1 227 aa11.91□□□□□ -0.5
CLN8-202ENST00000517514 GGA3Q9NZ52 723 aa11.91□□□□□ -0.5
CLN8-202ENST00000517514 LAMB1P07942 1786 aa11.91□□□□□ -0.5
CLN8-202ENST00000517514 GSG1L2A8MUP6 293 aa11.9□□□□□ -0.5
CLN8-202ENST00000517514 SMIM22K7EJ46 135 aa11.9□□□□□ -0.5
CLN8-202ENST00000517514 SGSM2O43147 1006 aa11.9□□□□□ -0.5
CLN8-202ENST00000517514 CDC45O75419 566 aa11.9□□□□□ -0.5
CLN8-202ENST00000517514 EAPPQ56P03 285 aaPredicted RBP11.9□□□□□ -0.5
CLN8-202ENST00000517514 TEX11Q8IYF3 940 aa11.9□□□□□ -0.5
CLN8-202ENST00000517514 SDR42E1Q8WUS8 393 aa11.9□□□□□ -0.5
CLN8-202ENST00000517514 ESYT1Q9BSJ8 1104 aa11.9□□□□□ -0.5
CLN8-202ENST00000517514 GPBP1L1Q9HC44 474 aaPredicted RBP11.9□□□□□ -0.5
CLN8-202ENST00000517514 EPB41L4AQ9HCS5 686 aaPredicted RBP11.9□□□□□ -0.5
CLN8-202ENST00000517514 DIAPH3Q9NSV4 1193 aa11.9□□□□□ -0.5
CLN8-202ENST00000517514 LAMA4Q16363 1823 aa11.9□□□□□ -0.5
CLN8-202ENST00000517514 PAPPA2Q9BXP8 1791 aa11.9□□□□□ -0.51
CLN8-202ENST00000517514 FLT1P17948 1338 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 CCDC171Q6TFL3 1326 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 PITPNM2Q9BZ72 1349 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 SSC5DA1L4H1 1573 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 TCP10L2B9ZVM9 353 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 HIP1O00291 1037 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
CLN8-202ENST00000517514 BAG3O95817 575 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 SLURP2P0DP57 97 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 PTH1RQ03431 593 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 FMR1Q06787 632 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLN8-202ENST00000517514 LRRFIP1Q32MZ4 808 aaKnown RBP11.89□□□□□ -0.51
CLN8-202ENST00000517514 C8orf34Q49A92 452 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 FKBP1CQ5VVH2 108 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 PNMA8AQ86V59 439 aaPredicted RBP11.89□□□□□ -0.51
CLN8-202ENST00000517514 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
CLN8-202ENST00000517514 TGFBRAP1Q8WUH2 860 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 AIDAQ96BJ3 306 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 TEPSINQ96N21 525 aa11.89□□□□□ -0.51
CLN8-202ENST00000517514 RPAP1Q9BWH6 1393 aaPredicted RBP11.89□□□□□ -0.51
CLN8-202ENST00000517514 RAD50Q92878 1312 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms