RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 KCNQ5Q9NR82 932 aa10.28□□□□□ -0.76
LINC00461-216ENST00000515885 PPP4R2Q9NY27 417 aa10.28□□□□□ -0.76
LINC00461-216ENST00000515885 SIRPGQ9P1W8 387 aa10.28□□□□□ -0.76
LINC00461-216ENST00000515885 KANSL3Q9P2N6 904 aa10.28□□□□□ -0.76
LINC00461-216ENST00000515885 TRAK1Q9UPV9 953 aa10.28□□□□□ -0.76
LINC00461-216ENST00000515885 BLMP54132 1417 aaPredicted RBP10.27□□□□□ -0.77
LINC00461-216ENST00000515885 PTCH1Q13635 1447 aa10.27□□□□□ -0.77
LINC00461-216ENST00000515885 PTPRUQ92729 1446 aa10.27□□□□□ -0.77
LINC00461-216ENST00000515885 A0A1W2PNR3 127 aa10.27□□□□□ -0.77
LINC00461-216ENST00000515885 FBXO24O75426 580 aa10.27□□□□□ -0.77
LINC00461-216ENST00000515885 GARTP22102 1010 aa10.27□□□□□ -0.77
LINC00461-216ENST00000515885 MSX1P28360 303 aa10.27□□□□□ -0.77
LINC00461-216ENST00000515885 MAP3K11Q16584 847 aa10.27□□□□□ -0.77
LINC00461-216ENST00000515885 PRPF40BQ6NWY9 871 aaKnown RBP10.27□□□□□ -0.77
LINC00461-216ENST00000515885 ANKRD24Q8TF21 1146 aa10.27□□□□□ -0.77
LINC00461-216ENST00000515885 NT5C1AQ9BXI3 368 aa10.27□□□□□ -0.77
LINC00461-216ENST00000515885 OXCT2Q9BYC2 517 aaPredicted RBP10.27□□□□□ -0.77
LINC00461-216ENST00000515885 MARF1Q9Y4F3 1742 aaKnown RBP10.27□□□□□ -0.77
LINC00461-216ENST00000515885 ENPP3O14638 875 aa10.26□□□□□ -0.77
LINC00461-216ENST00000515885 WDR44Q5JSH3 913 aa10.26□□□□□ -0.77
LINC00461-216ENST00000515885 TTC39BQ5VTQ0 682 aaPredicted RBP10.26□□□□□ -0.77
LINC00461-216ENST00000515885 RNF217Q8TC41 542 aa10.26□□□□□ -0.77
LINC00461-216ENST00000515885 HNRNPLLQ8WVV9 542 aaKnown RBP10.26□□□□□ -0.77
LINC00461-216ENST00000515885 KCNB2Q92953 911 aa10.26□□□□□ -0.77
LINC00461-216ENST00000515885 RNPC3Q96LT9 517 aaKnown RBP10.26□□□□□ -0.77
LINC00461-216ENST00000515885 SRPK1Q96SB4 655 aaKnown RBP10.26□□□□□ -0.77
LINC00461-216ENST00000515885 ABCB6Q9NP58 842 aa10.26□□□□□ -0.77
LINC00461-216ENST00000515885 PPM1HQ9ULR3 514 aa10.26□□□□□ -0.77
LINC00461-216ENST00000515885 UNC13BO14795 1591 aa10.26□□□□□ -0.77
LINC00461-216ENST00000515885 BRWD3Q6RI45 1802 aa10.26□□□□□ -0.77
LINC00461-216ENST00000515885 EP400Q96L91 3159 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 NALCNQ8IZF0 1738 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 XRN1Q8IZH2 1706 aaKnown RBP10.25□□□□□ -0.77
LINC00461-216ENST00000515885 GREM1O60565 184 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 RAB11FIP3O75154 756 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 RAB33AQ14088 237 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 LINC00528Q8N1L1 170 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 PHC3Q8NDX5 983 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 SNTG2Q9NY99 539 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 SALL4Q9UJQ4 1053 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 STRIP2Q9ULQ0 834 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 AKAP2Q9Y2D5 859 aa10.25□□□□□ -0.77
LINC00461-216ENST00000515885 TMEM238LA0A1B0GVL6 79 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 TTC24A2A3L6 582 aaPredicted RBP10.24□□□□□ -0.77
LINC00461-216ENST00000515885 SMPD1P17405 629 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 FAM160A1Q05DH4 1040 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 RASA3Q14644 834 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 SV2BQ7L1I2 683 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 CDAN1Q8IWY9 1227 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 TCF12Q99081 682 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 ZCCHC2Q9C0B9 1178 aaKnown RBP10.24□□□□□ -0.77
LINC00461-216ENST00000515885 C11orf16Q9NQ32 467 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 UBP1Q9NZI7 540 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 TLR6Q9Y2C9 796 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 ADGRL3Q9HAR2 1447 aa10.24□□□□□ -0.77
LINC00461-216ENST00000515885 A0A1B0GTH6 734 aa10.23□□□□□ -0.77
LINC00461-216ENST00000515885 PF4P02776 101 aa10.23□□□□□ -0.77
LINC00461-216ENST00000515885 EDN3P14138 238 aa10.23□□□□□ -0.77
LINC00461-216ENST00000515885 RHOQP17081 205 aa10.23□□□□□ -0.77
LINC00461-216ENST00000515885 YY1P25490 414 aa10.23□□□□□ -0.77
LINC00461-216ENST00000515885 ORAI2Q96SN7 254 aa10.23□□□□□ -0.77
LINC00461-216ENST00000515885 TRIM55Q9BYV6 548 aa10.23□□□□□ -0.77
LINC00461-216ENST00000515885 BRD7Q9NPI1 651 aa10.23□□□□□ -0.77
LINC00461-216ENST00000515885 TIMMDC1Q9NPL8 285 aa10.23□□□□□ -0.77
LINC00461-216ENST00000515885 C1orf167Q5SNV9 1468 aa10.23□□□□□ -0.77
LINC00461-216ENST00000515885 hCG_2014768A0A024R1R8 64 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 FAM221BA6H8Z2 402 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 SASH3O75995 380 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 CLSTN1O94985 981 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 CELA3AP09093 270 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 RLBP1P12271 317 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 LIG3P49916 1009 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 IGBP1P78318 339 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 COL9A2Q14055 689 aaPredicted RBP10.22□□□□□ -0.77
LINC00461-216ENST00000515885 DTHD1Q6ZMT9 781 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 LYSMD3Q7Z3D4 306 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 LIN7BQ9HAP6 207 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 TOR4AQ9NXH8 423 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 SUPT16HQ9Y5B9 1047 aaKnown RBP10.22□□□□□ -0.77
LINC00461-216ENST00000515885 SOS2Q07890 1332 aaPredicted RBP10.22□□□□□ -0.77
LINC00461-216ENST00000515885 BCL9LQ86UU0 1499 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 COL22A1Q8NFW1 1626 aaPredicted RBP10.22□□□□□ -0.77
LINC00461-216ENST00000515885 E9PCH4 1651 aa10.22□□□□□ -0.77
LINC00461-216ENST00000515885 A0A0G2JS52 829 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 GDF9O60383 454 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 BAG6P46379 1132 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 PCNX4Q63HM2 1172 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 TPTE2Q6XPS3 522 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 CYP4X1Q8N118 509 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 OR13H1Q8NG92 308 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 HPS1Q92902 700 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 CNTNAP3BQ96NU0 1288 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 DEPDC7Q96QD5 511 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 CNTNAP3Q9BZ76 1288 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 PRKAG3Q9UGI9 489 aa10.21□□□□□ -0.77
LINC00461-216ENST00000515885 VPS8Q8N3P4 1428 aa10.21□□□□□ -0.78
LINC00461-216ENST00000515885 MARCH6O60337 910 aa10.2□□□□□ -0.78
LINC00461-216ENST00000515885 MMP20O60882 483 aa10.2□□□□□ -0.78
LINC00461-216ENST00000515885 METP08581 1390 aa10.2□□□□□ -0.78
LINC00461-216ENST00000515885 LAMC1P11047 1609 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms